SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g171800

Feature Type:gene_model
Chromosome:Gm04
Start:41705467
stop:41708402
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g171800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G16390.1AT 3-Oct,ATOCT3 JGI N/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0022857GO-mf transmembrane transporter activity JGI N/AIEA
KOG0255 KOG Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) JGI N/AIEA
PTHR24064PantherFam SOLUTE CARRIER FAMILY 22 MEMBER JGI N/AIEA
PF00083Pfam Sugar (and other) transporter JGI N/AIEA

Gene model name correspondences to Glyma.04g171800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g33941 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g171800
>Glyma.04g171800.2 sequence-type=CDS polypeptide=Glyma.04g171800.2.p locus=Glyma.04g171800 id=Glyma.04g171800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGACTCCACCCCTCTCCTCTCCCAACCCAACCCATCATCATCATCGTCTCCCGACACACAAGAAGCACCGCCATCGAACCAACACCATCCCTCTCTGGGGTCCACAGTAGAACTCTGCATAGGCGAGTTCAACTGGTCCCAGTTCCTCCAGTCGATTCTGGTCTCCCTCGCATGGATATTCGACGCCCAGCAGACCTTCATCTCCGTCTTCACCGACGCCCTGCCCGAGTGGCACTGCACCGAGCGGGGCGCCAATGCATGCAAGACTGCCACCACAGTCTGCAGCCTCCCAAAGGGCTCGTGGGCCTGGGACGTGCCCACGCAGGCCTCCATCGTGTCGGAGTGGGGCCTGGAATGCGCCAACTCCGCGATCACGGGCCTCCCCGCTTCGATGTTCTTCTTGGGGTGTTTGATTGGCGGGTTCGTACTGGCCTCGCTAGCGGACTCGTCGCTCGGGCGCAAGAACATGCTCTTCTTCTCGTGCCTCGTGATGGCCATCACTTCCTTGCTCGTCACTCTCTCGCCCAACGTTTGGATCTATTCCGCTCTCAAGTTTCTCTGTGGGTTTGCTCGTGCTACCATTGGGACCTCTGCGCTCGTGCTGGCCTCTGAGCTCGTTGGGAAACGGTGGCGCGGCCAGATTAGCGTCATTGGCTTCTTTTGTTTTACTATAGGGTTCTTGTCCCTGCCAGCCATGGCTTACATAAACAGGAGTTCTTCATGGAGGAACCTTTATCTGTGGACATCCATTTCAACCATGTTCTACTGCATACTGGTGAAGTTGTTCGTTACGGAGTCCCCTAGATGGCTTCTAGTGCGAGGTAAAACAGAAGAAGCGGTGGAAACACTAAAGTGCATCACATCAATCACCCAAAGCAACCTCAATTTGGCCATAAATAACATGTCCCACAAGGAAGAAACATGGAACGTGGACATATTCTCAGCCCTCAAAATCTTGCTACAAAAAAAATGGTCTTCGAGAAGGCTGTCATTAATTATGGCAATGGGAATAGGCATTGGATTGGTGTATTACGGAATGCCACTGGGCCTCCAAAATCTATCCTTCAACCTCTACTTGAGTGTCACATTCAACGCCTTATCGGAGTTACCATCAGCATTGATTGTGCTCTTCTTCGTAGACAAGTTCAATAGGAGAGTTGCACTCCTCCTCTTCACAATCCTAAGTGGTGTTTTCAGTGTGATGTCAATCATGGAAATGAAGACATCATCGTGGACCAACAACATCCAAATAGTGTTTGAGTTAGTATCGTTCTTCAGCGCTTGTTCTTCGTTCAACGTGTACCTAATTTACACCACGGAGCTGTTCCCGACCTGCGTGAGGAACTCGGCGCTGTCGATGGCGAGGCTGGCAGTGGTGCTCGGTGGCACGTTCAGCCCGTTGCTGGTGAGTGCTGCAAGAGGGAACAAGTTTATGTGTTATGGGGTTTTTGGGTTGGTGATAGGGTTTAGCGGGGTCTTCGGAATATTCTTGCCTGAGACAAAAGGAAGGGCACTGTGTGATACAATGGATGAAGAAGAAAACAAAGAGAAAAACATGACTTGTGACATGTTCCTGGCTTGA
Predicted protein sequences of Glyma.04g171800
>Glyma.04g171800.2.p sequence-type=predicted peptide transcript=Glyma.04g171800.2 locus=Glyma.04g171800 id=Glyma.04g171800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADSTPLLSQPNPSSSSSPDTQEAPPSNQHHPSLGSTVELCIGEFNWSQFLQSILVSLAWIFDAQQTFISVFTDALPEWHCTERGANACKTATTVCSLPKGSWAWDVPTQASIVSEWGLECANSAITGLPASMFFLGCLIGGFVLASLADSSLGRKNMLFFSCLVMAITSLLVTLSPNVWIYSALKFLCGFARATIGTSALVLASELVGKRWRGQISVIGFFCFTIGFLSLPAMAYINRSSSWRNLYLWTSISTMFYCILVKLFVTESPRWLLVRGKTEEAVETLKCITSITQSNLNLAINNMSHKEETWNVDIFSALKILLQKKWSSRRLSLIMAMGIGIGLVYYGMPLGLQNLSFNLYLSVTFNALSELPSALIVLFFVDKFNRRVALLLFTILSGVFSVMSIMEMKTSSWTNNIQIVFELVSFFSACSSFNVYLIYTTELFPTCVRNSALSMARLAVVLGGTFSPLLVSAARGNKFMCYGVFGLVIGFSGVFGIFLPETKGRALCDTMDEEENKEKNMTCDMFLA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo