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Report for Sequence Feature Glyma.04g160000

Feature Type:gene_model
Chromosome:Gm04
Start:38493964
stop:38496610
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g160000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G15630.1AT COBL4,IRX6 JGI N/AIEA
GO:0010215GO-bp cellulose microfibril organization JGI N/AIEA
GO:0016049GO-bp cell growth JGI N/AIEA
GO:0031225GO-cc anchored component of membrane JGI N/AIEA
PTHR31673PantherFam PROTEIN COBRA JGI N/AIEA
PF04833Pfam COBRA-like protein JGI N/AIEA

Proteins Associated with Glyma.04g160000
LocusGene SymbolProtein Name
COBL4 Regulates cell wall expansion and cellulose depostion

Gene model name correspondences to Glyma.04g160000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g32120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g160000
>Glyma.04g160000.1 sequence-type=CDS polypeptide=Glyma.04g160000.1.p locus=Glyma.04g160000 id=Glyma.04g160000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATTTGTTAACGGTAAACAGCAGCCAAAGAGCACATTTACATGCTTGAAGTTGGTTGCCTTAATTGCTCTATACCTCGTCTTAATTTCTCCAGCAGAATCATTTGATCCGTTGGATCCAACCGGGAACGTGACAATAAGATGGGATATAATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTCCAACTATACCGCAATATTATGAATCCTGGGTGGACACTAGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGATTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTTAACACGCAGTTCACAAACTGCTGCAAGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCAGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCTAACAAGACAGTCAAATTGCCCAAAAACTTCAAATTGCTAGGACCAGGACCAGGATACTCATGTGGCCCAGCCAAGATTGTTCCATCCACTGCCATCCTCACAGAAGATCGTAGGCGAAAAATGCAAGCACTGATGTCCTGGAATGTGACATGCACGTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGTCAAAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAACAGAATGTCACGTCACCTCACCAAAAATCAGACATCACACTCACACCAAAACCATTATTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTACAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCACAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGCTGCCAAACTCTGCCCATAAACTACCAACAACTATTACATTGATGGCAGCCTATGTGGTTTTTACATTATTCTTTCATTTGGTTGTAACACTTTTTTGA

>Glyma.04g160000.2 sequence-type=CDS polypeptide=Glyma.04g160000.2.p locus=Glyma.04g160000 id=Glyma.04g160000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGGGTGCCACACTAGGCCTAGTGATTCTGTTTACTTCATCTTCAGGCATGGAATTTGTTAACGGTAAACAGCAGCCAAAGAGCACATTTACATGCTTGAAGTTGGTTGCCTTAATTGCTCTATACCTCGTCTTAATTTCTCCAGCAGAATCATTTGATCCGTTGGATCCAACCGGGAACGTGACAATAAGATGGGATATAATGTCCTGGACATCAGATGGTTATTTGGCCACTGTGACATTGTTTAACTTCCAACTATACCGCAATATTATGAATCCTGGGTGGACACTAGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGATTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTTAACACGCAGTTCACAAACTGCTGCAAGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCAGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCTAACAAGACAGTCAAATTGCCCAAAAACTTCAAATTGCTAGGACCAGGACCAGGATACTCATGTGGCCCAGCCAAGATTGTTCCATCCACTGCCATCCTCACAGAAGATCGTAGGCGAAAAATGCAAGCACTGATGTCCTGGAATGTGACATGCACGTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGTCAAAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAACAGAATGTCACGTCACCTCACCAAAAATCAGACATCACACTCACACCAAAACCATTATTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTACAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCACAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGCTGCCAAACTCTGCCCATAAACTACCAACAACTATTACATTGATGGCAGCCTATGTGGTTTTTACATTATTCTTTCATTTGGTTGTAACACTTTTTTGA

>Glyma.04g160000.3 sequence-type=CDS polypeptide=Glyma.04g160000.3.p locus=Glyma.04g160000 id=Glyma.04g160000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGATATAATGTCCTGGACATCAGATGGTTATTTGGGTGGACATGGGCAAAGAAGGAAATAATCTGGGCCATGATGGGAGCTCAAGCCACAGAACAAGGAGATTGTGCAAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAACCCTCAAGTGGTTGACTTGCTACCTGGAGCTCCTTTTAACACGCAGTTCACAAACTGCTGCAAGGGTGGTGTGCTTACATCTTGGGGGCAGAACCCTTCAGGTGCAGTCTCAGCATTTCAGATAGGTGTTGGCCTCTCTGGCACCTCTAACAAGACAGTCAAATTGCCCAAAAACTTCAAATTGCTAGGACCAGGACCAGGATACTCATGTGGCCCAGCCAAGATTGTTCCATCCACTGCCATCCTCACAGAAGATCGTAGGCGAAAAATGCAAGCACTGATGTCCTGGAATGTGACATGCACGTACTCACAGTTTCTTGCCTCCAAGAATCCAAGCTGTTGTGTTTCTTTGTCATCTTTCTACAGTGACAAAGTCACAGGTTGCCCACCTTGTGCTTGTGGTTGTCAAAATAACGATACTTGTGTCACGAAAGATTCAAAGATCCTGCAACAGAATGTCACGTCACCTCACCAAAAATCAGACATCACACTCACACCAAAACCATTATTACAATGCACACACCACCTGTGTCATGTCAGGGTGCACTGGCATTTGAAAGACAACTATAAGGACTATTGGCGTGTCAAGATTGCCATCATCAACTTCAACTATCGGTTGAATTTCACCGATTGGTCTCTTGTTGTGCAGCACCCTAATCTCAATAATGTCACCCAAGTCTACAGCTTTGAATACATGCCACTTCTTCCCTATGAATCCACAAATGACACAGGCATGTTCTATGGTTTGAAATATTACAATGATCTGTTGATGGAAGCTGGGCCTAAAGGGAATGTGCAGTCTGAGGTGCTCATGAAGAAGGACAAGAACACATTTACTCTCAAGCAGGGATGGGCATTTCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTGCCACCTCCTGATTCATATCCTATGCTGCCAAACTCTGCCCATAAACTACCAACAACTATTACATTGATGGCAGCCTATGTGGTTTTTACATTATTCTTTCATTTGGTTGTAACACTTTTTTGA
Predicted protein sequences of Glyma.04g160000
>Glyma.04g160000.1.p sequence-type=predicted peptide transcript=Glyma.04g160000.1 locus=Glyma.04g160000 id=Glyma.04g160000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEFVNGKQQPKSTFTCLKLVALIALYLVLISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNTQFTNCCKGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTEDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQQNVTSPHQKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESTNDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVVFTLFFHLVVTLF*

>Glyma.04g160000.2.p sequence-type=predicted peptide transcript=Glyma.04g160000.2 locus=Glyma.04g160000 id=Glyma.04g160000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLGATLGLVILFTSSSGMEFVNGKQQPKSTFTCLKLVALIALYLVLISPAESFDPLDPTGNVTIRWDIMSWTSDGYLATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNTQFTNCCKGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTEDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQQNVTSPHQKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESTNDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVVFTLFFHLVVTLF*

>Glyma.04g160000.3.p sequence-type=predicted peptide transcript=Glyma.04g160000.3 locus=Glyma.04g160000 id=Glyma.04g160000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGYNVLDIRWLFGWTWAKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRNPQVVDLLPGAPFNTQFTNCCKGGVLTSWGQNPSGAVSAFQIGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKIVPSTAILTEDRRRKMQALMSWNVTCTYSQFLASKNPSCCVSLSSFYSDKVTGCPPCACGCQNNDTCVTKDSKILQQNVTSPHQKSDITLTPKPLLQCTHHLCHVRVHWHLKDNYKDYWRVKIAIINFNYRLNFTDWSLVVQHPNLNNVTQVYSFEYMPLLPYESTNDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPMLPNSAHKLPTTITLMAAYVVFTLFFHLVVTLF*






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