Glyma.04g149900

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Report for Sequence Feature Glyma.04g149900

Feature Type:	gene_model
Chromosome:	Gm04
Start:	32603728
stop:	32617798
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.04g149900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G20060.1	AT	alpha/beta-Hydrolases superfamily protein	JGI	N/A	IEA
GO:0002084	GO-bp	protein depalmitoylation	EnsemblGenomes	N/A	IEA
GO:0016042	GO-bp	lipid catabolic process	JGI	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0004806	GO-mf	triglyceride lipase activity	JGI	N/A	IEA
GO:0008474	GO-mf	palmitoyl-(protein) hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	EnsemblGenomes	N/A	IEA
GO:0016787	GO-mf	hydrolase activity	JGI	N/A	IEA
GO:0052689	GO-mf	carboxylic ester hydrolase activity	EnsemblGenomes	N/A	IEA
KOG2112	KOG	Lysophospholipase	JGI	N/A	IEA
PTHR10655	Panther	LYSOPHOSPHOLIPASE-RELATED	JGI	N/A	IEA
PTHR10655:SF5	Panther		JGI	N/A	IEA
PF02230	PFAM	Phospholipase/Carboxylesterase	JGI	N/A	IEA
GN7V-67583	SoyCyc9-rxn	lysophospholipase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.04g149900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g149900 not represented in the dataset	Glyma.04g149900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.04g149900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma04g21090	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.04g149900

Limit To All Plant Sequences

>Glyma.04g149900.2 sequence-type=transcript locus=Glyma.04g149900 ID=Glyma.04g149900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
aaatttttataatttataaaattcgtaaaatataataatagtaatttataatttataTGGAAGAAGCGGAAAAGAATTAAAAACAAAGACGAGTCGAAGAATACCGCACAAAGCTTAGTACTCTTTTTTTGGTCTCTGGAGTTACACCACAGCCACGGAGGTTTGTCTCTAGGACTGCTCATTAGGTAGTTTTTTATTTAGAGGCTAACATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAGTTAGCAAGCAAATGAAGCAAACTGTGAAAAATAATTCTTTTCGTTTTTGGTCCATTGTAATTTTTTGTTATTCCAGATTTGCTTAGATTTCTGTTGATGGTATGCATAATATATCCGCTACCCATTTTGTGAACACTTGAGTCTGAGGGAATCTTCATGACAAGGTACTGTTATTGAAACAAAACATGGTGGTTCTTAAAGCATGGTGATGGAATGCTGCTATTATGCCGAAGAGGATTCTACAATGCTAGTTGGGATTTCGTTTTGTCAAATGATCTTTATGGATACAGCTTGTGGAGCGCTGATCTTTCAGTGGGCTTCCCAAGTGGGACTAATTATTACCATGGTTGTACATGGTTTCATTTTGTATAACTTTCATTGTTTTTTGAAACTGGATTAGACTGACTGGTTTGAGTGTTTGACAGGTAGACTGTCGATCTTCTGACCAGTTCGTTGACACACAAAAAAAGCGAATCCTTTTTAGAATCAGTAAAAAATATCAGTCAAGAACTAGTCAAAAACTGAGCCTAGTTAAAAATTGGATTGAACTAATGTTTTTTAAAAATGTTTTCAGCGTTATT

>Glyma.04g149900.3 sequence-type=transcript locus=Glyma.04g149900 ID=Glyma.04g149900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
aaatttttataatttataaaattcgtaaaatataataatagtaatttataatttataTGGAAGAAGCGGAAAAGAATTAAAAACAAAGACGAGTCGAAGAATACCGCACAAAGCTTAGTACTCTTTTTTTGGTCTCTGGAGTTACACCACAGCCACGGAGCTCTAGGACTGCTCATTAGGTAGTTTTTTATTTAGAGGCTAACATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAGTTAGCAAGCAAATGAAGCAAACTGTGAAAAATAATTCTTTTCGTTTTTGGTCCATTGTAATTTTTTGTTATTCCAGATTTGCTTAGATTTCTGTTGATGGTATGCATAATATATCCGCTACCCATTTTGTGAACACTTGAGTCTGAGGGAATCTTCATGACAAGGTACTGTTATTGAAACAAAACATGGTGGTTCTTAAAGCATGGTGATGGAATGCTGCTATTATGCCGAAGAGGATTCTACAATGCTAGTTGGGATTTCGTTTTGTCAAATGATCTTTATGGATACAGCTTGTGGAGCGCTGATCTTTCAGTGGGCTTCCCAAGTGGGACTAATTATTACCATGGTTGTACATGGTTTCATTTTGTATAACTTTCATTGTTTTTTGAAACTGGATTAGACTGACTGGTTTGAGTGTTTGACAGGTAGACTGTCGATCTTCTGACCAGTTCGTTGACACACAAAAAAAGCGAATCCTTTTTAGAATCAGTAAAAAATATCAGTCAAGAACTAGTCAAAAACTGAGCCTAGTTAAAAATTGGATTGAACTAATGTTTTTTAAAAATGTTTTCAGCGTTATT

>Glyma.04g149900.4 sequence-type=transcript locus=Glyma.04g149900 ID=Glyma.04g149900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTAGACTGTCGTCTTTGAACAAATTTTAAGCATCAAATTGAGCACCAGTTATTTATCTCATCTCTAGGACTGCTCATTAGGTAGTTTTTTATTTAGAGGCTAACATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAGTTAGCAAGCAAATGAAGCAAACTGTGAAAAATAATTCTTTTCGTTTTTGGTCCATTGTAATTTTTTGTTATTCCAGATTTGCTTAGATTTCTGTTGATGGTATGCATAATATATCCGCTACCCATTTTGTGAACACTTGAGTCTGAGGGAATCTTCATGACAAGGTACTGTTATTGAAACAAAACATGGTGGTTCTTAAAGCATGGTGATGGAATGCTGCTATTATGCCGAAGAGGATTCTACAATGCTAGTTGGGATTTCGTTTTGTCAAATGATCTTTATGGATACAGCTTGTGGAGCGCTGATCTTTCAGTGGGCTTCCCAAGTGGGACTAATTATTACCATGGTTGTACATGGTTTCATTTTGTATAACTTTCATTGTTTTTTGAAACTGGATTAGACTGACTGGTTTGAGTGTTTGACAGGTAGACTGTCGATCTTCTGACCAGTTCGTTGACACACAAAAAAAGCGAATCCTTTTTAGAATCAGTAAAAAATATCAGTCAAGAACTAGTCAAAAACTGAGCCTAGTTAAAAATTGGATTGAACTAATGTTTTTTAAAAATGTTTTCAGCGTTATT

Coding sequences of Glyma.04g149900

Limit To All Plant Sequences

>Glyma.04g149900.1 sequence-type=CDS polypeptide=Glyma.04g149900.1.p locus=Glyma.04g149900 ID=Glyma.04g149900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAG

>Glyma.04g149900.2 sequence-type=CDS polypeptide=Glyma.04g149900.2.p locus=Glyma.04g149900 ID=Glyma.04g149900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAG

>Glyma.04g149900.3 sequence-type=CDS polypeptide=Glyma.04g149900.3.p locus=Glyma.04g149900 ID=Glyma.04g149900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAG

>Glyma.04g149900.4 sequence-type=CDS polypeptide=Glyma.04g149900.4.p locus=Glyma.04g149900 ID=Glyma.04g149900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGCTTTGCTGCGCCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCCACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCTGCTGCACATGTTGCAAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGAGCAGCTACTGCCCTGTACTCCGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCGGCCAACCTAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCATGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCGAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAATGGGCTTGGACACTACACAATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGAGCCTTGAGGGGAATACAGTTTAG

Predicted protein sequences of Glyma.04g149900

Limit To All Plant Sequences

>Glyma.04g149900.1.p sequence-type=predicted peptide transcript=Glyma.04g149900.1 locus=Glyma.04g149900 ID=Glyma.04g149900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANLSAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLSLEGNTV*

>Glyma.04g149900.2.p sequence-type=predicted peptide transcript=Glyma.04g149900.2 locus=Glyma.04g149900 ID=Glyma.04g149900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANLSAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLSLEGNTV*

>Glyma.04g149900.3.p sequence-type=predicted peptide transcript=Glyma.04g149900.3 locus=Glyma.04g149900 ID=Glyma.04g149900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANLSAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLSLEGNTV*

>Glyma.04g149900.4.p sequence-type=predicted peptide transcript=Glyma.04g149900.4 locus=Glyma.04g149900 ID=Glyma.04g149900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANLSAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLSLEGNTV*

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