Glyma.04g147700

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Report for Sequence Feature Glyma.04g147700

Feature Type:	gene_model
Chromosome:	Gm04
Start:	30179767
stop:	30183807
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.04g147700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G26670.1	AT	Plant haem oxygenase (decyclizing) family protein	JGI	N/A	IEA
GO:0006788	GO-bp	heme oxidation	EnsemblGenomes	N/A	IEA
GO:0006788	GO-bp	heme oxidation	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0004392	GO-mf	heme oxygenase (decyclizing) activity	EnsemblGenomes	N/A	IEA
GO:0004392	GO-mf	heme oxygenase (decyclizing) activity	JGI	N/A	IEA
KOG4480	KOG	Heme oxygenase	JGI	N/A	IEA
PTHR10720	Panther	HEME OXYGENASE	JGI	N/A	IEA
PF01126	PFAM	Heme oxygenase	JGI	N/A	IEA
PWY-5874	SoyCyc9	heme degradation I	Plant Metabolic Network		ISS
GN7V-64772	SoyCyc9-rxn	heme oxygenase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.04g147700

Locus	Gene Symbol	Protein Name
	HO1	heme oxygenase 1, chloroplastic

Expression Patterns of Glyma.04g147700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g147700 not represented in the dataset	Glyma.04g147700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.04g147700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma04g19030	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.04g147700

Limit To All Plant Sequences

>Glyma.04g147700.2 sequence-type=transcript locus=Glyma.04g147700 ID=Glyma.04g147700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GCTGACGACAAGAGAAAATAAAAAACCGCATCTGTTCCGTGTAAGGAGAAGTCACAAAATTTCTCAGCTCCTGCCTGTATACTTCACATGGCCTAATCCCACAGTCGCACACTCTTCCACCCTGCCATCACCAATCATCAACACAACGCCCATTATTATTTAAAAATCCTTAATATATTATTATTCTTCGTCCATCGCTTTTTCTTGAAGACTACTTCATCCTTCTTATTAGTTTCTTTTTATTTCAATCTTTCTCACTCGCACGCACGCACGCACAGTCTCTAGTGGTACCGTGCCGGTTCATTTGCTTCATCCACCACCTCATTTTCAGAGATTTCGTGCACTCAACAAACTCTCATCCACCCATGGCGTCATCACTATCAACAATAGCTCTATTCCTGCCCCAATCGCTCTATATTAAGCCCCGCCTGGCGCCACGGCCTCTTCCTCCCCCTCAATTCCGCTCCCTTTTCCTAACCTCACCGGCGGGTGCTCGTACTGCTACTGTCATGCCTAGAAGGGCGGCGGTCATCGTGTCGGCGGCGACGGCGGAGACGCCGAAGAAGAAGGGCGAATCGAAAGGGTTCGTGGAAGAGATGAGGTTCGTGGCGATGAGGCTGCACACGAGGGACCAGGCCAGGGAGGGCGAGAAGGAGGTCAAGCAGCCCGAGGAGAAAGCCGTTACCAAGTGGGACCCATCCGTCGAAGGGTACCTGAAATTTCTTGTGGACAGTAAGCTCGTTTATGACACGCTGGAGAAAATCGTTCAAGAGGCTCCTCATCCTTCTTATGCTGAATTCAGAAACACTGGATTGGAAAGGTCTGCAAGTTTGGCAGAAGATTTGGAGTGGTTCAAGGAGCAAGGTTATACCATTCCTGAACCTTCTTCTCCTGGTCTTACCTATGCACAATATCTTAAGGAGTTATCTGTGAAGGATCCCCAAGCATTCATTTGCCATTTTTACAATATCTACTTTGCTCATTCAGCTGGTGGTCGAATGATTGGGAAAAAGGTAACCAAACACATGCATGCTTAAAGAGGTTAAATTATGTTGTGTGTCACATTGTTTATGAGTACATCTTTGGTTTTGAGTGCTATTTGTGGGCCAGAATATCTGTTTTATGTTTTATAATTACAGACACATTCATATCTGGGGATATTTTCATTTTTCCTCTTCATATGGCATAGTTACTATACTACTCCCTCTGAACTCATA

Coding sequences of Glyma.04g147700

Limit To All Plant Sequences

>Glyma.04g147700.1 sequence-type=CDS polypeptide=Glyma.04g147700.1.p locus=Glyma.04g147700 ID=Glyma.04g147700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTCATCACTATCAACAATAGCTCTATTCCTGCCCCAATCGCTCTATATTAAGCCCCGCCTGGCGCCACGGCCTCTTCCTCCCCCTCAATTCCGCTCCCTTTTCCTAACCTCACCGGCGGGTGCTCGTACTGCTACTGTCATGCCTAGAAGGGCGGCGGTCATCGTGTCGGCGGCGACGGCGGAGACGCCGAAGAAGAAGGGCGAATCGAAAGGGTTCGTGGAAGAGATGAGGTTCGTGGCGATGAGGCTGCACACGAGGGACCAGGCCAGGGAGGGCGAGAAGGAGGTCAAGCAGCCCGAGGAGAAAGCCGTTACCAAGTGGGACCCATCCGTCGAAGGGTACCTGAAATTTCTTGTGGACAGTAAGCTCGTTTATGACACGCTGGAGAAAATCGTTCAAGAGGCTCCTCATCCTTCTTATGCTGAATTCAGAAACACTGGATTGGAAAGGTCTGCAAGTTTGGCAGAAGATTTGGAGTGGTTCAAGGAGCAAGGTTATACCATTCCTGAACCTTCTTCTCCTGGTCTTACCTATGCACAATATCTTAAGGAGTTATCTGTGAAGGATCCCCAAGCATTCATTTGCCATTTTTACAATATCTACTTTGCTCATTCAGCTGGTGGTCGAATGATTGGGAAAAAGGTTGCTGAAAAGTTACTTAACAACAAGGCGTTGGAGTTCTACAAATGGGATGATGACCTTCCACGATTGTTGCAGAATGTGAGAGACAAGTTGAATAAAGTTGCTGAACCTTGGAGTCGGGAAGAAAAGGACCACTGTCTGGAAGAAACAGAAAAATCATTCAAGCTCTCTGGAGAGATTCTCCGTTTGATTTTATCATGA

>Glyma.04g147700.2 sequence-type=CDS polypeptide=Glyma.04g147700.2.p locus=Glyma.04g147700 ID=Glyma.04g147700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGTCATCACTATCAACAATAGCTCTATTCCTGCCCCAATCGCTCTATATTAAGCCCCGCCTGGCGCCACGGCCTCTTCCTCCCCCTCAATTCCGCTCCCTTTTCCTAACCTCACCGGCGGGTGCTCGTACTGCTACTGTCATGCCTAGAAGGGCGGCGGTCATCGTGTCGGCGGCGACGGCGGAGACGCCGAAGAAGAAGGGCGAATCGAAAGGGTTCGTGGAAGAGATGAGGTTCGTGGCGATGAGGCTGCACACGAGGGACCAGGCCAGGGAGGGCGAGAAGGAGGTCAAGCAGCCCGAGGAGAAAGCCGTTACCAAGTGGGACCCATCCGTCGAAGGGTACCTGAAATTTCTTGTGGACAGTAAGCTCGTTTATGACACGCTGGAGAAAATCGTTCAAGAGGCTCCTCATCCTTCTTATGCTGAATTCAGAAACACTGGATTGGAAAGGTCTGCAAGTTTGGCAGAAGATTTGGAGTGGTTCAAGGAGCAAGGTTATACCATTCCTGAACCTTCTTCTCCTGGTCTTACCTATGCACAATATCTTAAGGAGTTATCTGTGAAGGATCCCCAAGCATTCATTTGCCATTTTTACAATATCTACTTTGCTCATTCAGCTGGTGGTCGAATGATTGGGAAAAAGGTAACCAAACACATGCATGCTTAA

Predicted protein sequences of Glyma.04g147700

Limit To All Plant Sequences

>Glyma.04g147700.1.p sequence-type=predicted peptide transcript=Glyma.04g147700.1 locus=Glyma.04g147700 ID=Glyma.04g147700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASSLSTIALFLPQSLYIKPRLAPRPLPPPQFRSLFLTSPAGARTATVMPRRAAVIVSAATAETPKKKGESKGFVEEMRFVAMRLHTRDQAREGEKEVKQPEEKAVTKWDPSVEGYLKFLVDSKLVYDTLEKIVQEAPHPSYAEFRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKLLNNKALEFYKWDDDLPRLLQNVRDKLNKVAEPWSREEKDHCLEETEKSFKLSGEILRLILS*

>Glyma.04g147700.2.p sequence-type=predicted peptide transcript=Glyma.04g147700.2 locus=Glyma.04g147700 ID=Glyma.04g147700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASSLSTIALFLPQSLYIKPRLAPRPLPPPQFRSLFLTSPAGARTATVMPRRAAVIVSAATAETPKKKGESKGFVEEMRFVAMRLHTRDQAREGEKEVKQPEEKAVTKWDPSVEGYLKFLVDSKLVYDTLEKIVQEAPHPSYAEFRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKVTKHMHA*

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