Glyma.04g142800

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Report for Sequence Feature Glyma.04g142800

Feature Type:	gene_model
Chromosome:	Gm04
Start:	25295771
stop:	25298815
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.04g142800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G02530.1	AT	chloroplast thylakoid lumen protein	JGI	N/A	IEA
GO:0010206	GO-bp	photosystem II repair	EnsemblGenomes	N/A	IEA

Expression Patterns of Glyma.04g142800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g142800 not represented in the dataset	Glyma.04g142800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.04g142800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g22150	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.04g142800

Limit To All Plant Sequences

>Glyma.04g142800.2 sequence-type=transcript locus=Glyma.04g142800 ID=Glyma.04g142800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCAACCTTATCCTCAGAAGGTTCAATCAAAATTGCCGTGTCTTTGAATTTTGCTGTCCAAAAATACCAGCAAAATAAGAAAATAAAATACAGAGAAAGATTGGAAAGAGAAATGGCAAAAAATATTCTctcaacctcaaaccccatcctactacctagttcatcaccatcctcatcctcatcctcatTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAACTGAGCTCCAGTTCAGAAGAGAAGACTGAGGTGGACGCATTCAATTCCTCATTAGCTTCACTAATTTCATCAGTTTCTAAGAAAGATGTTGAGTCCTCCAAAATTGCCTTTGTCTCTTCGGCCACTGCATTTGAGAAGTGGACTTCTATGACAGGCCTTGCTGCTCAGCTTAAGGGCCTTTGAGGGAAAACAATGTACAAAAGATATCATTTCATTTCATCATTTTGTGATCAATATAGAGAAATCCACTAATTTTCCTACCCATGTCACCTAATTGTTGTCTTGGAAGCAGTCTCTTCACAGCATTATCTAGTACTACTTCATAACGATCAATAAGCTCATTCTTTGTTAACAAAGCTTGGGTTACGAGTAGTGCCACTGAAATTTGTAATTTTGATGTCATTATTTAATGGCATGTTCTGTTATGTTGGCTCATCTACCTTGACAAATAAAGAACTTTTTAAGTTATTGTAGTAGGGTGATCTCTATATATATTAAATCTGTTTAGCAGGGAATTACCTGGCCTATTTTTT

>Glyma.04g142800.3 sequence-type=transcript locus=Glyma.04g142800 ID=Glyma.04g142800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCAACCTTATCCTCAGAAGGTTCAATCAAAATTGCCGTGTCTTTGAATTTTGCTGTCCAAAAATACCAGCAAAATAAGAAAATAAAATACAGAGAAAGATTGGAAAGAGAAATGGCAAAAAATATTCTctcaacctcaaaccccatcctactacctagttcatcaccatcctcatcctcatcctcatTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGTGTGATCAGTTCTTCCAAACAAGAAACAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAATTTCTAAGAAAGATGTTGAGTCCTCCAAAATTGCCTTTGTCTCTTCGGCCACTGCATTTGAGAAGTGGACTTCTATGACAGGCCTTGCTGCTCAGCTTAAGGGCCTTTGAGGGAAAACAATGTACAAAAGATATCATTTCATTTCATCATTTTGTGATCAATATAGAGAAATCCACTAATTTTCCTACCCATGTCACCTAATTGTTGTCTTGGAAGCAGTCTCTTCACAGCATTATCTAGTACTACTTCATAACGATCAATAAGCTCATTCTTTGTTAACAAAGCTTGGGTTACGAGTAGTGCCACTGAAATTTGTAATTTTGATGTCATTATTTAATGGCATGTTCTGTTATGTTGGCTCATCTACCTTGACAAATAAAGAACTTTTTAAGTTATTGTAGTAGGGTGATCTCTATATATATTAAATCTGTTTAGCAGGGAATTACCTGGCCTATTTTTT

>Glyma.04g142800.4 sequence-type=transcript locus=Glyma.04g142800 ID=Glyma.04g142800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
AGCAACCTTATCCTCAGAAGGTTCAATCAAAATTGCCGTGTCTTTGAATTTTGCTGTCCAAAAATACCAGCAAAATAAGAAAATAAAATACAGAGAAAGATTGGAAAGAGAAATGGCAAAAAATATTCTctcaacctcaaaccccatcctactacctagttcatcaccatcctcatcctcatcctcatTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGTGTGATCAGTTCTTCCAAACAAGAAACAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAAGTAAGTTTGGTTCCTGAATATGAGTGAAATCACAGTATTCATTCGGAATTATACTGTAATTAAATCTTTTATCCTGAATTCTTGGAATATAAAATAAAAAAGCCTACTCTAGATTATGGTGATGGCCATAGCTACTAGGTTCGCTCAGAAACTATATGAACCATGAAAAATTACCTGTGTACCAGTGTATTGCAGTGTAAAAAGCTGTTAACATCATCATAATTTCAGGAAATGACAAACTATGTACCAATCACTCTATTAATCAGGTAACTGGTGGTAGTTTATTTCCTTGATATTAAATTCTAGTATTGCTGCATCAGATTTTCATTTTTCAGAATGTGAGAAAATTGTTTCTTTCTATTTC

Coding sequences of Glyma.04g142800

Limit To All Plant Sequences

>Glyma.04g142800.1 sequence-type=CDS polypeptide=Glyma.04g142800.1.p locus=Glyma.04g142800 ID=Glyma.04g142800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAAAATATTCTCTCAACCTCAAACCCCATCCTACTACCTAGTTCATCACCATCCTCATCCTCATCCTCATTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGTGTGATCAGTTCTTCCAAACAAGAAACAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAACTGAGCTCCAGTTCAGAAGAGAAGACTGAGGTGGACGCATTCAATTCCTCATTAGCTTCACTAATTTCATCAGTTTCTAAGAAAGATGTTGAGTCCTCCAAAATTGCCTTTGTCTCTTCGGCCACTGCATTTGAGAAGTGGACTTCTATGACAGGCCTTGCTGCTCAGCTTAAGGGCCTTTGA

>Glyma.04g142800.2 sequence-type=CDS polypeptide=Glyma.04g142800.2.p locus=Glyma.04g142800 ID=Glyma.04g142800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAAAATATTCTCTCAACCTCAAACCCCATCCTACTACCTAGTTCATCACCATCCTCATCCTCATCCTCATTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAACTGAGCTCCAGTTCAGAAGAGAAGACTGAGGTGGACGCATTCAATTCCTCATTAGCTTCACTAATTTCATCAGTTTCTAAGAAAGATGTTGAGTCCTCCAAAATTGCCTTTGTCTCTTCGGCCACTGCATTTGAGAAGTGGACTTCTATGACAGGCCTTGCTGCTCAGCTTAAGGGCCTTTGA

>Glyma.04g142800.3 sequence-type=CDS polypeptide=Glyma.04g142800.3.p locus=Glyma.04g142800 ID=Glyma.04g142800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAAAATATTCTCTCAACCTCAAACCCCATCCTACTACCTAGTTCATCACCATCCTCATCCTCATCCTCATTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGTGTGATCAGTTCTTCCAAACAAGAAACAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAATTTCTAAGAAAGATGTTGAGTCCTCCAAAATTGCCTTTGTCTCTTCGGCCACTGCATTTGAGAAGTGGACTTCTATGA

>Glyma.04g142800.4 sequence-type=CDS polypeptide=Glyma.04g142800.4.p locus=Glyma.04g142800 ID=Glyma.04g142800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAAAAAATATTCTCTCAACCTCAAACCCCATCCTACTACCTAGTTCATCACCATCCTCATCCTCATCCTCATTTGTAAAACCAATACATGTTTGCTCCAATCCGATAATCAAAAGCACTTCGAAGAGGGAATTAACTCTTTGCAAAGCAACACCACACTCTCCAATTGTTGTGACAAAGAGAGGCTTGTCCATCAGCTTCATCACCAGCTTTGTGCTTTCATTGGCTGGTAAGAAGAATGCAAATGCAGCAATACTCGAGGCAGATGATGATGAAGAACTCTTGGAGAAAGTAAAGCGTGACAGAAAGAAGAGACTTGAGAAGCAAGGTGTGATCAGTTCTTCCAAACAAGAAACAGGGTATCTTCAAGATCTGGTGTACAAGCTAAGCGCAGTTGGTCAAGCACTTGAAAAGAATGATCTATCTGCTGCTGGTTCTGTCCTTGGAGGAAGCACCGATGCAGATTGGGTCCAAAGAGCTAATATAGCATTCAATAAAGTAAGTTTGGTTCCTGAATATGAGTGA

Predicted protein sequences of Glyma.04g142800

Limit To All Plant Sequences

>Glyma.04g142800.1.p sequence-type=predicted peptide transcript=Glyma.04g142800.1 locus=Glyma.04g142800 ID=Glyma.04g142800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNPIIKSTSKRELTLCKATPHSPIVVTKRGLSISFITSFVLSLAGKKNANAAILEADDDEELLEKVKRDRKKRLEKQGVISSSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANIAFNKLSSSSEEKTEVDAFNSSLASLISSVSKKDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL*

>Glyma.04g142800.2.p sequence-type=predicted peptide transcript=Glyma.04g142800.2 locus=Glyma.04g142800 ID=Glyma.04g142800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNPIIKSTSKRELTLCKATPHSPIVVTKRGLSISFITSFVLSLAGKKNANAAILEADDDEELLEKVKRDRKKRLEKQGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANIAFNKLSSSSEEKTEVDAFNSSLASLISSVSKKDVESSKIAFVSSATAFEKWTSMTGLAAQLKGL*

>Glyma.04g142800.3.p sequence-type=predicted peptide transcript=Glyma.04g142800.3 locus=Glyma.04g142800 ID=Glyma.04g142800.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNPIIKSTSKRELTLCKATPHSPIVVTKRGLSISFITSFVLSLAGKKNANAAILEADDDEELLEKVKRDRKKRLEKQGVISSSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANIAFNKFLRKMLSPPKLPLSLRPLHLRSGLL*

>Glyma.04g142800.4.p sequence-type=predicted peptide transcript=Glyma.04g142800.4 locus=Glyma.04g142800 ID=Glyma.04g142800.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAKNILSTSNPILLPSSSPSSSSSSFVKPIHVCSNPIIKSTSKRELTLCKATPHSPIVVTKRGLSISFITSFVLSLAGKKNANAAILEADDDEELLEKVKRDRKKRLEKQGVISSSKQETGYLQDLVYKLSAVGQALEKNDLSAAGSVLGGSTDADWVQRANIAFNKVSLVPEYE*

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