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Report for Sequence Feature Glyma.04g142300

Feature Type:gene_model
Chromosome:Gm04
Start:24723349
stop:24724293
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g142300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13780.1AT Acyl-CoA N-acyltransferases (NAT) superfamily protein JGI N/AIEA
GO:0006475GO-bp internal protein amino acid acetylation EnsemblGenomesN/AIEA
GO:0017198GO-bp N-terminal peptidyl-serine acetylation EnsemblGenomesN/AIEA
GO:0018002GO-bp N-terminal peptidyl-glutamic acid acetylation EnsemblGenomesN/AIEA
GO:0022626GO-cc cytosolic ribosome EnsemblGenomesN/AIEA
GO:0031415GO-cc NatA complex EnsemblGenomesN/AIEA
GO:0008080GO-mf N-acetyltransferase activity EnsemblGenomesN/AIEA
GO:0008080GO-mf N-acetyltransferase activity JGI N/AIEA
GO:0016747GO-mf transferase activity, transferring acyl groups other than amino-acyl groups JGI N/AIEA
GO:1990189GO-mf peptide-serine-N-acetyltransferase activity EnsemblGenomesN/AIEA
GO:1990190GO-mf peptide-glutamate-N-acetyltransferase activity EnsemblGenomesN/AIEA
KOG3235 KOG Subunit of the major N alpha-acetyltransferase JGI N/AIEA
PTHR23091Panther N-TERMINAL ACETYLTRANSFERASE JGI N/AIEA
PTHR23091:SF4Panther ARD1 HOMOLOG A, N-ACETYLTRANSFERASE JGI N/AIEA
PF00583PFAM Acetyltransferase (GNAT) family JGI N/AIEA
GN7V-68396SoyCyc9-rxn N-terminal methionine Nα-acetyltransferase Plant Metabolic Network ISS

Expression Patterns of Glyma.04g142300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g142300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g25800 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g142300
>Glyma.04g142300.1 sequence-type=CDS polypeptide=Glyma.04g142300.1.p locus=Glyma.04g142300 ID=Glyma.04g142300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGTGCATAAGGAAGGCGACGGTGAAGGACCTTCTGGCGATGCAGGCGTGCAACCTGTTCTGCCTCCCTGAGAACTACCAGATGAAGTACTACCTCTATCACATCCTCTCCTGGCCCCAGCTCCTCTACGTCGCCGAAGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAAGAGACCACTGACTGCCACGGCCACATCACCTCCCTCGCCGTCCTCCGCACCCACCGCAAGCTAGGCCTCGCCACTAAGCTCATGACCGCCGCCCAGAACGCCATGGAACAGGTGTTTGGTGCCGAGTACGTGTCCCTGCACGTGCGCAAGAGCAACCGCGCGGCCTTCAATTTGTACACGGAGACTCTAGGGTACAAGATTCATGATGTGGAGGCCAAGTATTATGCGGACGGGGAGGATGCTTACGACATGAGGAAGCAGCTCAAGGGGAAGCAGCACCACCATCATCACCATCACCACCACCACCGTCACGAGCACGGCGGTGGCTGTTGTTCCGGGGAGCCCAAGGGGAATGTTGCAAAAGCCACCTGA
Predicted protein sequences of Glyma.04g142300
>Glyma.04g142300.1.p sequence-type=predicted peptide transcript=Glyma.04g142300.1 locus=Glyma.04g142300 ID=Glyma.04g142300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVCIRKATVKDLLAMQACNLFCLPENYQMKYYLYHILSWPQLLYVAEDYNGRIVGYVLAKMEEETTDCHGHITSLAVLRTHRKLGLATKLMTAAQNAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQHHHHHHHHHHRHEHGGGCCSGEPKGNVAKAT*






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