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Report for Sequence Feature Glyma.04g141800

Feature Type:gene_model
Chromosome:Gm04
Start:24035001
stop:24036812
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g141800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13810.1AT Glutaredoxin family protein JGI N/AIEA
GO:0022900GO-bp electron transport chain EnsemblGenomesN/AIEA
GO:0045454GO-bp cell redox homeostasis EnsemblGenomesN/AIEA
GO:0045454GO-bp cell redox homeostasis JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0005623GO-cc cell EnsemblGenomesN/AIEA
GO:0009055GO-mf electron transfer activity EnsemblGenomesN/AIEA
GO:0009055GO-mf electron carrier activity JGI N/AIEA
GO:0015035GO-mf protein disulfide oxidoreductase activity EnsemblGenomesN/AIEA
GO:0015035GO-mf protein disulfide oxidoreductase activity JGI N/AIEA
KOG2824 KOG Glutaredoxin-related protein JGI N/AIEA
PTHR10168Panther GLUTAREDOXIN JGI N/AIEA
PTHR10168:SF44Panther GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED JGI N/AIEA
PF00462PFAM Glutaredoxin JGI N/AIEA

Expression Patterns of Glyma.04g141800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g141800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g26440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g141800
>Glyma.04g141800.1 sequence-type=CDS polypeptide=Glyma.04g141800.1.p locus=Glyma.04g141800 ID=Glyma.04g141800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCGCGGTTCCCGTTCTTCAACCGTTCGAACACGATTCACTCGACGAAATCGGAATCCTCGCAGAAACCCTACCTCGTCCACCACCACCTCCACAATCTTGACCGGTCCGGTTCGGTGAACCGCTTCTACGGTTCAGTGGACTCCATGAAATCCTCAATCCGCGGAAAAATGGTGAAGAAGCTCTGCACCTTATTCGAATCCTCCAAAAAACCCTTGCCAGAACCAGAATCCGAATCTGAATCGTTTTCTTCTTCAAAATCACGTTCAAAAACAGATTCAGATTCGTGCATTACTATATTGTTTCGATTACCCGGCACAGAGGACAGAATAGTTGTGTATTTAACGAGCCTTCGCGGGATTCGGAGAACTTTCGAGGATTGCAACGCGGTCCGCATGATCCTGAAGGGGTTCAGGGTTTGGGTGGACGAGAGGGATGTGTCTATGGACTTGAGCTACAGGGAGGAGCTGCAGCATGTGCTGGGGGAGCACCATGTGGCGCTCCCCCAAGTTTTTATACGAGGGAAGTACATTGGTGGTGCTGATGTGATCAAGCATTTGTTTGAGAGTGGTGACTTGGCGAAGATGATTCTGGAAGGGCTCCCCAAGCTGAAACCCGGGTTCGTGTGTGACAATTGTGGGGACGCGAGGTTCGTGCCGTGCGAGAATTGCAGTGGGAGCAGGAAGGTGTTTGATGAGGATGAAGGGGAATTGAAGAGGTGCTTGGAATGCAATGAGAATGGACTCCTCAGGTGTCCGTATTGCTGTTCTTGA
Predicted protein sequences of Glyma.04g141800
>Glyma.04g141800.1.p sequence-type=predicted peptide transcript=Glyma.04g141800.1 locus=Glyma.04g141800 ID=Glyma.04g141800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSRFPFFNRSNTIHSTKSESSQKPYLVHHHLHNLDRSGSVNRFYGSVDSMKSSIRGKMVKKLCTLFESSKKPLPEPESESESFSSSKSRSKTDSDSCITILFRLPGTEDRIVVYLTSLRGIRRTFEDCNAVRMILKGFRVWVDERDVSMDLSYREELQHVLGEHHVALPQVFIRGKYIGGADVIKHLFESGDLAKMILEGLPKLKPGFVCDNCGDARFVPCENCSGSRKVFDEDEGELKRCLECNENGLLRCPYCCS*






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