SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g127500

Feature Type:gene_model
Chromosome:Gm04
Start:16399255
stop:16402455
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g127500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G11290.1AT CRR22 JGI N/AIEA
PTHR24015PantherFam OS07G0578800 PROTEIN-RELATED JGI N/AIEA
PF01535Pfam PPR repeat JGI N/AIEA
PF13041Pfam PPR repeat family JGI N/AIEA
PF14432Pfam DYW family of nucleic acid deaminases JGI N/AIEA

Proteins Associated with Glyma.04g127500
LocusGene SymbolProtein Name
PPR33 Psudo-Response Regulator gene 33

Gene model name correspondences to Glyma.04g127500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g15530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g127500
>Glyma.04g127500.1 sequence-type=CDS polypeptide=Glyma.04g127500.1.p locus=Glyma.04g127500 id=Glyma.04g127500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGCTCTTTGCTCTATGCCCTTTACCCTTTGGGGCCAACACAAATACCAACACAAAGTACTCCAAAACTACCACAACAACAACCTCTTTCTACCAAAGTAATTCCATTCCTACCCGAGTATATAGCCATAGGCACCCTTCAGTTGTACTCTTAGAAAACTGCACTTCTAAGAAGGAGCTTTATCAAATCCTTCCCTTTATCATCAAAAACGGTTTCTACAATGAGCACTTGTTTCAGACGAAGGTTATCAGCTTGTTCTGTAAATTTGGCAGCAATAGTGAAGCAGCTCGTGTCTTTGAGCATGTTGAGCTCAAGCTCGATGTGCTTTACCACATTATGCTAAAAGGGTATGCAAAAAACTCGAGTTTAGGTGATGCCTTGTGCTTCTTCCTTAGGATGATGTGTGATGAGGTTAGACTTGTTGTGGGTGATTATGCTTGCCTGTTGCAATTGTGTGGAGAGAATTTGGACCTCAAAAAGGGTAGAGAGATTCATGGACTGATCATAACTAATGGGTTTGAGTCCAATTTGTTTGTCATGACTGCTGTTATGAGTTTATATGCCAAGTGTAGGCAGATTGATAATGCATATAAGATGTTCGAGAGAATGCAGCATAAGGATTTGGTTTCTTGGACAACATTGGTTGCAGGATATGCACAGAATGGACATGCAAAGAGAGCATTGCAGTTGGTTTTGCAGATGCAGGAAGCTGGCCAAAAGCCTGATTCTGTCACGTTGGTCAGTATTTTACCGGCGGTTGCAGATATGAAGGCTTTGAGAATTGGAAGGTCTATTCATGGTTATGCTTTCAGATCAGGATTTGAATCACTGGTTAATGTTACAAATGCACTTCTTGATATGTACTTCAAATGTGGGTCTGCAAGGATTGCAAGGTTGGTTTTTAAGGGGATGAGGAGTAAGACTGTTGTTTCATGGAATACCATGATTGATGGTTGTGCCCAAAATGGTGAATCTGAAGAAGCCTTTGCAACTTTTCTAAAGATGTTGGATGAAGGGGAGGTACCTACACGTGTTACAATGATGGGAGTTTTACTTGCTTGCGCTAATTTGGGTGATCTTGAAAGAGGGTGGTTTGTTCATAAATTATTGGACAAGCTGAAACTTGATTCTAATGTGTCAGTAATGAACTCTTTAATATCCATGTATTCTAAATGCAAGAGAGTTGATATAGCAGCCTCGATATTTAACAATTTGGAGAAAACAAATGTCACTTGGAATGCCATGATATTAGGCTACGCACAAAATGGGTGTGTGAAGGAGGCTTTAAATCTATTCTGTATGATGCAATCTCAAGGCATTAAACTTGATTGTTTTACTTTAGTTGGTGTAATTACTGCTCTTGCAGATTTCTCAGTCAACCGCCAGGCTAAGTGGATTCATGGACTTGCAGTAAGAGCTTGTATGGACAACAATGTCTTTGTTTCCACTGCTCTTGTGGACATGTATGCAAAATGTGGAGCCATCAAAACTGCAAGAAAGCTTTTCGACATGATGCAAGAGAGACATGTGATAACATGGAATGCAATGATAGATGGATATGGGACACATGGCGTAGGGAAAGAAACTCTAGATCTCTTCAATGAGATGCAGAAGGGAGCTGTTAAGCCAAATGATATAACATTTTTGTCTGTAATTTCAGCTTGTAGTCACTCAGGTTTTGTGGAAGAAGGTCTCTTGCTCTTCAAAAGCATGCAGGAAGATTATTACTTGGAGCCTACTATGGATCACTATAGTGCCATGGTTGATCTCCTTGGTCGTGCTGGCCAGCTAGATGATGCTTGGAATTTCATCCAAGAGATGCCCATCAAACCAGGGATTTCTGTTCTAGGTGCAATGTTGGGTGCTTGCAAAATCCATAAAAATGTAGAATTGGGAGAGAAGGCTGCACAAAAACTATTTAAGTTAGACCCCGATGAGGGAGGGTATCATGTGTTGCTTGCCAATATTTATGCCTCTAATTCAATGTGGGATAAAGTAGCCAAGGTGAGAACAGCCATGGAAGATAAGGGGCTCCACAAAACTCCAGGCTGCAGTTGGGTGGAGTTGAGAAATGAAATTCATACATTCTACTCAGGAAGTACTAATCATCCAGAATCCAAAAAAATTTATGCTTTTCTTGAGACTCTTGGAGATGAGATAAAAGCTGCAGGTTATGTACCTGACCCCGATTCAATTCATGATGTGGAAGAAGACGTGAAGAAACAATTGCTCAGTAGCCATAGTGAAAGGCTTGCTATTGCATTTGGACTTTTGAATACAAGCCCTGGCACAACATTACACATTAGAAAAAATCTTAGAGTTTGTGGTGATTGCCATGATACCACTAAGTACATTTCACTTGTGACAGGGAGAGAAATTATAGTTCGTGATTTACGTAGGTTTCATCATTTTAAGAATGGAAGCTGTTCTTGTGGGGATTACTGGTGA

>Glyma.04g127500.2 sequence-type=CDS polypeptide=Glyma.04g127500.2.p locus=Glyma.04g127500 id=Glyma.04g127500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACATGCAGCTCTTTGCTCTATGCCCTTTACCCTTTGGGGCCAACACAAATACCAACACAAAGTACTCCAAAACTACCACAACAACAACCTCTTTCTACCAAAGTAATTCCATTCCTACCCGAGTATATAGCCATAGGCACCCTTCAGTTGTACTCTTAGAAAACTGCACTTCTAAGAAGGAGCTTTATCAAATCCTTCCCTTTATCATCAAAAACGGTTTCTACAATGAGCACTTGTTTCAGACGAAGGTTATCAGCTTGTTCTGTAAATTTGGCAGCAATAGTGAAGCAGCTCGTGTCTTTGAGCATGTTGAGCTCAAGCTCGATGTGCTTTACCACATTATGCTAAAAGGGTATGCAAAAAACTCGAGTTTAGGTGATGCCTTGTGCTTCTTCCTTAGGATGATGTGTGATGAGGTTAGACTTGTTGTGGGTGATTATGCTTGCCTGTTGCAATTGTGTGGAGAGAATTTGGACCTCAAAAAGGGTAGAGAGATTCATGGACTGATCATAACTAATGGGTTTGAGTCCAATTTGTTTGTCATGACTGCTGTTATGAGTTTATATGCCAAGTGTAGGCAGATTGATAATGCATATAAGATGTTCGAGAGAATGCAGCATAAGGATTTGGTTTCTTGGACAACATTGGTTGCAGGATATGCACAGAATGGACATGCAAAGAGAGCATTGCAGTTGGTTTTGCAGATGCAGGAAGCTGGCCAAAAGCCTGATTCTGTCACGTTGGTCAGTATTTTACCGGCGGTTGCAGATATGAAGGCTTTGAGAATTGGAAGGTCTATTCATGGTTATGCTTTCAGATCAGGATTTGAATCACTGGTTAATGTTACAAATGCACTTCTTGATATGTACTTCAAATGTGGGTCTGCAAGGATTGCAAGGTTGGTTTTTAAGGGGATGAGGAGTAAGACTGTTGTTTCATGGAATACCATGATTGATGGTTGTGCCCAAAATGGTGAATCTGAAGAAGCCTTTGCAACTTTTCTAAAGATGTTGGATGAAGGGGAGGTACCTACACGTGTTACAATGATGGGAGTTTTACTTGCTTGCGCTAATTTGGGTGATCTTGAAAGAGGGTGGTTTGTTCATAAATTATTGGACAAGCTGAAACTTGATTCTAATGTGTCAGTAATGAACTCTTTAATATCCATGTATTCTAAATGCAAGAGAGTTGATATAGCAGCCTCGATATTTAACAATTTGGAGAAAACAAATGTCACTTGGAATGCCATGATATTAGGCTACGCACAAAATGGGTGTGTGAAGGAGGCTTTAAATCTATTCTGTATGATGCAATCTCAAGGCATTAAACTTGATTGTTTTACTTTAGTTGGTGTAATTACTGCTCTTGCAGATTTCTCAGTCAACCGCCAGGCTAAGTGGATTCATGGACTTGCAGTAAGAGCTTGTATGGACAACAATGTCTTTGTTTCCACTGCTCTTGTGGACATGTATGCAAAATGTGGAGCCATCAAAACTGCAAGAAAGCTTTTCGACATGATGCAAGAGAGACATGTGATAACATGGAATGCAATGATAGATGGATATGGGACACATGGCGTAGGGAAAGAAACTCTAGATCTCTTCAATGAGATGCAGAAGGGAGCTGTTAAGCCAAATGATATAACATTTTTGTCTGTAATTTCAGCTTGTAGTCACTCAGGTTTTGTGGAAGAAGGTCTCTTGCTCTTCAAAAGCATGCAGGAAGATTATTACTTGGAGCCTACTATGGATCACTATAGTGCCATGGTTGATCTCCTTGGTCGTGCTGGCCAGCTAGATGATGCTTGGAATTTCATCCAAGAGATGCCCATCAAACCAGGGATTTCTGTTCTAGGTGCAATGTTGGGTGCTTGCAAAATCCATAAAAATGTAGAATTGGGAGAGAAGGCTGCACAAAAACTATTTAAGTTAGACCCCGATGAGGGAGGGTATCATGTGTTGCTTGCCAATATTTATGCCTCTAATTCAATGTGGGATAAAGTAGCCAAGGTGAGAACAGCCATGGAAGATAAGGGGCTCCACAAAACTCCAGGCTGCAGTTGGGTGGAGTTGAGAAATGAAATTCATACATTCTACTCAGGAAGTACTAATCATCCAGAATCCAAAAAAATTTATGCTTTTCTTGAGACTCTTGGAGATGAGATAAAAGCTGCAGGTTATGTACCTGACCCCGATTCAATTCATGATGTGGAAGAAGACGTGAAGAAACAATTGCTCAGTAGCCATAGTGAAAGGCTTGCTATTGCATTTGGACTTTTGAATACAAGCCCTGGCACAACATTACACATTAGAAAAAATCTTAGAGTTTGTGGTGATTGCCATGATACCACTAAGTACATTTCACTTGTGACAGGGAGAGAAATTATAGTTCGTGATTTACGTAGGTTTCATCATTTTAAGAATGGAAGCTGTTCTTGTGGGGATTACTGGTGA
Predicted protein sequences of Glyma.04g127500
>Glyma.04g127500.1.p sequence-type=predicted peptide transcript=Glyma.04g127500.1 locus=Glyma.04g127500 id=Glyma.04g127500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQLFALCPLPFGANTNTNTKYSKTTTTTTSFYQSNSIPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW*

>Glyma.04g127500.2.p sequence-type=predicted peptide transcript=Glyma.04g127500.2 locus=Glyma.04g127500 id=Glyma.04g127500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNMQLFALCPLPFGANTNTNTKYSKTTTTTTSFYQSNSIPTRVYSHRHPSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo