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Report for Sequence Feature Glyma.04g126700

Feature Type:gene_model
Chromosome:Gm04
Start:17057705
stop:17060281
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g126700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12930.1AT ARM repeat superfamily protein JGI N/AIEA
GO:0006606GO-bp protein import into nucleus EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0031965GO-cc nuclear membrane EnsemblGenomesN/AIEA
GO:0008139GO-mf nuclear localization sequence binding EnsemblGenomesN/AIEA
GO:0008565GO-mf protein transporter activity EnsemblGenomesN/AIEA
PTHR12363Panther TRANSPORTIN 3 AND IMPORTIN 13 JGI N/AIEA
PTHR12363:SF4Panther JGI N/AIEA

Expression Patterns of Glyma.04g126700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g126700 not represented in the dataset
Glyma.04g126700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g126700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g15361 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.04g126700
>Glyma.04g126700.2 sequence-type=transcript locus=Glyma.04g126700 ID=Glyma.04g126700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
atgcacaatttgaaggagGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

>Glyma.04g126700.3 sequence-type=transcript locus=Glyma.04g126700 ID=Glyma.04g126700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA
Coding sequences of Glyma.04g126700
>Glyma.04g126700.1 sequence-type=CDS polypeptide=Glyma.04g126700.1.p locus=Glyma.04g126700 ID=Glyma.04g126700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTGGATCAACGAGAACCGCTTTGGCATCATGCGCTAGCTCGGGGAAGGTGGCTTCGCCTACGTCTACCTCGTCAAGGAGGCTCCCAACGACTCTGCCACTGCCGACCTCGCCAAGAAGCTCAAAGGATCCTCTCATCTCTCCGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

>Glyma.04g126700.2 sequence-type=CDS polypeptide=Glyma.04g126700.2.p locus=Glyma.04g126700 ID=Glyma.04g126700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCACAATTTGAAGGAGGTTGATCCAGATATCAGCCTTTCTCTTAAACAGAACCCTGCTTCTTATACACAAGTTTTGAATGCTTCCTCTAGAGGGTTGCACAGAATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA

>Glyma.04g126700.3 sequence-type=CDS polypeptide=Glyma.04g126700.3.p locus=Glyma.04g126700 ID=Glyma.04g126700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAGAACTGTATTCAGTTATCTTCCCATATCCATGGCAACTGAACCTGCTGCAGATGACTTAATACTTTCACTGCTAAGGGTTTTCTGGCCCATCTTGGAGAAACTTTTTGGCTCTGAGCATATGGAGAATGGGAATTTATCCGTAGCAGCTTGCCGAGCTCTTTCACTAGCTGTTCGATCTTCAAGTCAGCATTTTGTGACATTACTGCCCAAGGTGCTGGACTGGCTTTCAAAAAATTTTGTTTTATTCCAAAGTCATGAATGCTATATAAGAATCGCTTCCATTGTCATTGAAGAATTTGGTCATCTAGAGGAGTACGGACCTTTATTTGTCACTTCTGACGACATTCCAGACATTGATAAGAAAAAGTAA
Predicted protein sequences of Glyma.04g126700
>Glyma.04g126700.1.p sequence-type=predicted peptide transcript=Glyma.04g126700.1 locus=Glyma.04g126700 ID=Glyma.04g126700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFGSTRTALASCASSGKVASPTSTSSRRLPTTLPLPTSPRSSKDPLISPVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*

>Glyma.04g126700.2.p sequence-type=predicted peptide transcript=Glyma.04g126700.2 locus=Glyma.04g126700 ID=Glyma.04g126700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MHNLKEVDPDISLSLKQNPASYTQVLNASSRGLHRMRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*

>Glyma.04g126700.3.p sequence-type=predicted peptide transcript=Glyma.04g126700.3 locus=Glyma.04g126700 ID=Glyma.04g126700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRTVFSYLPISMATEPAADDLILSLLRVFWPILEKLFGSEHMENGNLSVAACRALSLAVRSSSQHFVTLLPKVLDWLSKNFVLFQSHECYIRIASIVIEEFGHLEEYGPLFVTSDDIPDIDKKK*






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