SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g126400

Feature Type:gene_model
Chromosome:Gm04
Start:16143313
stop:16149078
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g126400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G65440.2AT GTB1 JGI N/AIEA
GO:0006357GO-bp regulation of transcription by RNA polymerase II JGI N/AIEA
GO:0032784GO-bp regulation of DNA-templated transcription, elongation JGI N/AIEA
PTHR10145PantherFam TRANSCRIPTION ELONGATION FACTOR SPT6 JGI N/AIEA
PTHR10145:SF6PantherFam TRANSCRIPTION ELONGATION FACTOR SPT6 JGI N/AIEA

Gene model name correspondences to Glyma.04g126400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.04g126400
>Glyma.04g126400.1 sequence-type=CDS polypeptide=Glyma.04g126400.1.p locus=Glyma.04g126400 id=Glyma.04g126400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATACTCTTCCGATGACAGAGTATCACTCTTTGATGATATTGCTGAAGATCAGACTAACGATGATGTAGAGGATGACATGGCAGATTTTATAGTGGATGATGAAGATGTCATCTACGGGATGGGAGATTCTCTCAACAAAAAACTTAAAGCCAGGAAACATTCGCCTGCATTTTCGAAAGGCAAACATAGTTTTGGCAAGGAAGGTCAGCTGGAAAACCACATTGGGATAGTTCAAATTCAGGCTACTAAGTCTGATGATCCTAACAAGTATAAATCATTCATCCCTACTGACATGCACATAGCTGGAGAGGATAACTGTGTAAATGATACAGACATACCTGAGAGGATGCAGATAATTCAGGACATTGTAGGATCTGCAATCGTCAGAATGAGTATAGAAGAAGAAAGTTCCTGGATACTATGTCAACTAGCATCCAACATAAATCCATTGTTCAATGAGGCTAAATCCTGCAGACTAGTCGATACAGCAAAAAGGGAAGATATTATTAGTTTCTTGGAATTGCGTCATACAATGAAATATGATATACCATTTATTGCAATGTACCGGAAGGAACAATGCCTTAGTCTTCTAGAAGATCTGAAACTGGAAGAATCAGAAAACATATTCAATGATATTGAAAGAAATCATATGTTGAAATGGCACCAGGCTGCAGTGATGTTAAGCAGTGAGATTCCTTTCAGGAAATATGTGAGCACCATATTTATGGATAAGGCATTAGTTTCAACTAGCCCTACAATAAAAGGAAATACAACAGTAGATTCCTTTCATGAATTTGCTGGTGTTAAGTGGCTGTGGGACAAACCTCTCTCGAAGTTTTTGGATTCCCAGGCTATTCATTCAGAAGGCTGA

>Glyma.04g126400.2 sequence-type=CDS polypeptide=Glyma.04g126400.2.p locus=Glyma.04g126400 id=Glyma.04g126400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAATACTCTTCCGATGACAGAGTATCACTCTTTGATGATATTGCTGAAGATCAGACTAACGATGATGTAGAGGATGACATGGCAGATTTTATAGTGGATGATGAAGATGTCATCTACGGGATGGGAGATTCTCTCAACAAAAAACTTAAAGCCAGGAAACATTCGCCTGCATTTTCGAAAGGCAAACATAGTTTTGGCAAGGAAGGTCAGCTGGAAAACCACATTGGGATAGTTCAAATTCAGGCTACTAAGTCTGATGATCCTAACAAGTATAAATCATTCATCCCTACTGACATGCACATAGCTGGAGAGGATAACTGTGTAAATGATACAGACATACCTGAGAGGATGCAGATAATTCAGGACATTGTAGGATCTGCAATCGTCAGAATGAGTATAGAAGAAGAAAGTTCCTGGATACTATGTCAACTAGCATCCAACATAAATCCATTGTTCAATGAGGCTAAATCCTGCAGACTAGTCGATACAGCAAAAAGGGAAGATATTATTAGTTTCTTGGAATTGCGTCATACAATGAAATATGATATACCATTTATTGCAATGTACCGGAAGGAACAATGCCTTAGTCTTCTAGAAGATCTGAAACTGGAAGAATCAGAAAACATATTCAATGATATTGAAAGAAATCATATGTTGAAATGGCACCAGATATTTGATTCAATCACCAATATGCTCAAGAAGGCTGAAACCGAGAGTGAGATTGATGATATTGATAGGAAGTTTAATTTGCATTTTCCACCAGCTGAGGAGTTTTTTGATAGTGGTTTTAAAAGGCCTCTGACAAAATCATAG
Predicted protein sequences of Glyma.04g126400
>Glyma.04g126400.1.p sequence-type=predicted peptide transcript=Glyma.04g126400.1 locus=Glyma.04g126400 id=Glyma.04g126400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEYSSDDRVSLFDDIAEDQTNDDVEDDMADFIVDDEDVIYGMGDSLNKKLKARKHSPAFSKGKHSFGKEGQLENHIGIVQIQATKSDDPNKYKSFIPTDMHIAGEDNCVNDTDIPERMQIIQDIVGSAIVRMSIEEESSWILCQLASNINPLFNEAKSCRLVDTAKREDIISFLELRHTMKYDIPFIAMYRKEQCLSLLEDLKLEESENIFNDIERNHMLKWHQAAVMLSSEIPFRKYVSTIFMDKALVSTSPTIKGNTTVDSFHEFAGVKWLWDKPLSKFLDSQAIHSEG*

>Glyma.04g126400.2.p sequence-type=predicted peptide transcript=Glyma.04g126400.2 locus=Glyma.04g126400 id=Glyma.04g126400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEYSSDDRVSLFDDIAEDQTNDDVEDDMADFIVDDEDVIYGMGDSLNKKLKARKHSPAFSKGKHSFGKEGQLENHIGIVQIQATKSDDPNKYKSFIPTDMHIAGEDNCVNDTDIPERMQIIQDIVGSAIVRMSIEEESSWILCQLASNINPLFNEAKSCRLVDTAKREDIISFLELRHTMKYDIPFIAMYRKEQCLSLLEDLKLEESENIFNDIERNHMLKWHQIFDSITNMLKKAETESEIDDIDRKFNLHFPPAEEFFDSGFKRPLTKS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo