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Report for Sequence Feature Glyma.04g123700

Feature Type:gene_model
Chromosome:Gm04
Start:16002630
stop:16006606
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g123700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G45380.1AT solute:sodium symporters;urea transmembrane transporters JGI N/AIEA
GO:0006810GO-bp transport EnsemblGenomesN/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0071918GO-bp urea transmembrane transport EnsemblGenomesN/AIEA
GO:0005887GO-cc integral component of plasma membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0005215GO-mf transporter activity EnsemblGenomesN/AIEA
GO:0005215GO-mf transporter activity JGI N/AIEA
GO:0015204GO-mf urea transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0015293GO-mf symporter activity EnsemblGenomesN/AIEA
GO:0022857GO-mf transmembrane transporter activity EnsemblGenomesN/AIEA
KOG2348 KOG Urea transporter JGI N/AIEA
PTHR11819Panther SODIUM/SOLUTE SYMPORTER JGI N/AIEA
PTHR11819:SF15Panther UREA ACTIVE TRANSPORTER JGI N/AIEA
PF00474PFAM Sodium:solute symporter family JGI N/AIEA

Expression Patterns of Glyma.04g123700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g123700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g14790 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g123700
>Glyma.04g123700.1 sequence-type=CDS polypeptide=Glyma.04g123700.1.p locus=Glyma.04g123700 ID=Glyma.04g123700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTTCTGCATTAGTAGAGTGTCCACCATTTGAATTTTCTAGCAAGTACTATCATGTGTCTGAAAATGGAGGTGTGTGTGTGAGGCAGACCAGTTTCTTTGAAGGCAAACCAGTGCTTAATCAGGGTGTTGGTTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCCGTCTTCACCTCTTTCTTGGTGTGGCTGGAGAAGCGTTATGTTGGGTCACGTCACACATCTGAATGGTTCAATACAGCAGGAAGAAATGTTAAGACGGGGCTTATTGCAAGTGTCATTGTGTCTCAGTGGACATGGGCTGCTACAATCCTGCAAAGCTCTAATGTTGCATGGGAGTATGGAGTTAGTGGACCTTTCTGGTATGCTAGTGGGGCCACCATCCAGGTATTGTTGTTTGGAATCATGGCTATAGAGATTAAAAGAAAGGCTCCTCATGCTCATACTGTGTGTGAAATTGTCAAGGCCCGTTGGGGGACTTCTGCGCACATTGTTTTCCTCATTTTCTGCTTCTTGACGAATATAATTGTGACGGCTATGTTGCTCCTCGGTGGTTCTGCGGTTGTAAATGCATTAACTGGAGTGAACCTTTATGCTGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACACTAGCGGGTGGACTGAAGGCCACATTCTTAGCAAGCTATATCCATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTACCTTGTCTACACGGCTAGCAGCGAGCTTGGTAGCCCTTCTGTTGTTTACAATCGCCTGCTAGAGGTTGCAAGCAAATCAAGAACATGTCAGGATCCTATATCACACCAAGGACAATCTTGTGGTCCAGTTAGTGGTAATCACAAAGGTTCTTACCTAACAATGCTAAGTTCCGGTGGCTTAGTTTTTGGGATTATAAACATTGTTGGAAATTTTGGCACTGTGTTTGTTGACAATGGATATTGGGTGAGTGCCATTGCTGCAAGACCTTCATCTACTCATAAGGGGTACTTGTTGGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCATTAGGTCTAGGAGCCCTGGCCCTTGATTTACCAATAAATGAAAATGAAGCAGGCCGTGGACTTGTTCCCCCTGCTACGGCTGTAGCTTTGATGGGGAAAGGAGGATCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTAACTTCTGCTGGTTCATCAGAACTCATTGCGGTGTCCTCATTATGCACATATGATATCTACCGAACTTACATAAATCCTAATGCAAGTGGAAAGCAAATCCTCAAAGTGTCAAGGGGTGTCGTCCTAGGATTCGGGTGTTTCATGGGGTTGTTAGCAGTTATACTGAACAAGGCTGAAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCCATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAATTGGAGCCATTCTTGGAACAGTGTTAGGTTGTGTTTTAGGAATTATCACTTGGCTGTCTGTTACAAAAATACAATATGGCCGGGTAAACCTCAATACAACTGGCAGAAATGCACCAATGCTTGCTGGAAACCTTGTCTCTATACTAACTGGAGGAGTTGCTCATGCTGTCTGCAGCATGTTGAGACCTCAGAACTATGACTGGAGTACCACCAAGCAAATCACAGTGGTTGAAAAGGAAAAATCTAATCTTCCAGCAGAAGAGTTTAAAGAAGAAAAACTAATCAGAGCTAAATCATGGGTGGTGAAGTGGGGTGTTGGTTTCACTCTTTTGATTGTCATTCTATGGCCTATTCTCTCCCTCCCAGCAGGGGAGTTTAGTAAGGGCTACTTCTATTTCTGGGCAGTGATTGCTATAGGATGGGGTACTGTTGGTTCTGCTGTGATAATTGTTTTACCACTAATAGAGAGCTGGGAAACCATTCAGACAGTTATTATGGGCATGTTTACAAATGACAGGCTCATGGAAAAGGTAGAGGAGTTAAATTTCAAGTTGCAGACCATCATGCAGGCAATGCCAGAAGCTGAGAGACTTTACTTGCTTGAGAAGGGGAAGGCCAAAAAGTTAGACTCCTCGGAACAGCAGGCTAGTTCTCTTCCTGCATAA
Predicted protein sequences of Glyma.04g123700
>Glyma.04g123700.1.p sequence-type=predicted peptide transcript=Glyma.04g123700.1 locus=Glyma.04g123700 ID=Glyma.04g123700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASALVECPPFEFSSKYYHVSENGGVCVRQTSFFEGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRNVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPHAHTVCEIVKARWGTSAHIVFLIFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLEVASKSRTCQDPISHQGQSCGPVSGNHKGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINENEAGRGLVPPATAVALMGKGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKQILKVSRGVVLGFGCFMGLLAVILNKAEVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAILGTVLGCVLGIITWLSVTKIQYGRVNLNTTGRNAPMLAGNLVSILTGGVAHAVCSMLRPQNYDWSTTKQITVVEKEKSNLPAEEFKEEKLIRAKSWVVKWGVGFTLLIVILWPILSLPAGEFSKGYFYFWAVIAIGWGTVGSAVIIVLPLIESWETIQTVIMGMFTNDRLMEKVEELNFKLQTIMQAMPEAERLYLLEKGKAKKLDSSEQQASSLPA*






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