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Report for Sequence Feature Glyma.04g121500

Feature Type:gene_model
Chromosome:Gm04
Start:15253041
stop:15260588
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g121500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G66020.1AT Phosphoinositide phosphatase family protein JGI N/AIEA
GO:0016311GO-bp dephosphorylation EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0042578GO-mf phosphoric ester hydrolase activity EnsemblGenomesN/AIEA
GO:0042578GO-mf phosphoric ester hydrolase activity JGI N/AIEA
GO:0052866GO-mf phosphatidylinositol phosphate phosphatase activity EnsemblGenomesN/AIEA
KOG1889 KOG Putative phosphoinositide phosphatase JGI N/AIEA
PTHR11200Panther INOSITOL 5-PHOSPHATASE JGI N/AIEA
PF02383PFAM SacI homology domain JGI N/AIEA
GN7V-52183SoyCyc9-rxn phosphatidylinositol-3,4-bisphosphate 4-phosphatase Plant Metabolic Network ISS

Expression Patterns of Glyma.04g121500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g121500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g14320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g121500
>Glyma.04g121500.1 sequence-type=CDS polypeptide=Glyma.04g121500.1.p locus=Glyma.04g121500 ID=Glyma.04g121500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTCTGCAGTGCACAACGATTGAATGACCTGGGTGATGAGTCTAGATTGCTTCCTCTTTGGAGACAGGCAGAGCCTCGATTCCTATGGAACAATTATATGTTAGAAGTGCTTATAGATAACAAGCTTGAACCATACTTGCTCCCTGTAGTTCAAGGCTTTCATCACTTTCAAGCAGTCATTGGGAAAGATATTATTGATGTCAATTTGACTGCCAGGAGATGCACAGGAAGAAATGGAACTCGGATGTGGAGAAGAGGAGTTGATCCTGATGGCTATGTTGCCAATTTTGTGGAAATAGAACAAATTATGCAGTTTAATGGGTATACTGCTTCATTTGTTCAGGTCCGTGGTTCTATCCCACTCCTCTGGCAGCAAATTGTTGACTTAACTTATAAACCAAAGTTTGAGTTATTGAAACTTGAGGAAGCTCCACGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGGGCAGTATTGGCTGTTGATGTTGTTAACGAGCATGGCGGAGAAGGGCGACTGTGTGAAAAATTTGGTGATGCATCGCAGCATGTGGCTGGTAATGATATATCTGCACTTGGATTTCACCATGTCTGTGGGCATGTTCATTTTGATCGTCTCTCAATCCTGTATGATCAAATTCAAGATATCCTTGAGAGAAATGGATATCTTCTATTGAATGGAAAAGGAGAGAAAATGAAGGAGCAAGTTAGAGTTGTTAGGACCAATTGTATAGATTGTTTAGACCGTACAAATGTAACTCAGAGCATGATAGGCCGAAATATGTTGGAATATCAGCTTAGAAGGCTTGGTGTCTTTGGTGCTGAAGAAACCATTAGTTCACATCCAAATCTGGATGAAAACTTTAAGATCTTGTGGGCTAATCATGGGGATGATATAAGTATTCAATACTCAGGAACTCCTGCTCTTAAAGGAGACTTTGTCAGATTTGGGCACCGCACAATTCAAGGGATACTACAAGATGGTGTCAATGCTCTTCTACGATATTATTTCAATAATTTTGATGCAATTGATCTCTTGCAAGGACATTATATAGTTTCTGTTGGCCGAGATACAGCCGCCACTTCTCAGAAAGGATGCCTTGAAGCTTCATTTCCTCTGGCGTTGGGTCTGGTTTTGATTGGTTTCCTTTTTGCAGCCATGTCACTGAGGCAAGTTCAATATGATTTTCGGCACATCTTCTTTTCGCTAATGTGGGCGGGCATTAGCATCGGCATAGCAGCATTTGTGAGGGCTAATGGTCGTGTTTTCTGCAACAGGCCTCGCCTACACAACCCCCGGTGA
Predicted protein sequences of Glyma.04g121500
>Glyma.04g121500.1.p sequence-type=predicted peptide transcript=Glyma.04g121500.1 locus=Glyma.04g121500 ID=Glyma.04g121500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFCSAQRLNDLGDESRLLPLWRQAEPRFLWNNYMLEVLIDNKLEPYLLPVVQGFHHFQAVIGKDIIDVNLTARRCTGRNGTRMWRRGVDPDGYVANFVEIEQIMQFNGYTASFVQVRGSIPLLWQQIVDLTYKPKFELLKLEEAPRVLERHFLDLRKKYGAVLAVDVVNEHGGEGRLCEKFGDASQHVAGNDISALGFHHVCGHVHFDRLSILYDQIQDILERNGYLLLNGKGEKMKEQVRVVRTNCIDCLDRTNVTQSMIGRNMLEYQLRRLGVFGAEETISSHPNLDENFKILWANHGDDISIQYSGTPALKGDFVRFGHRTIQGILQDGVNALLRYYFNNFDAIDLLQGHYIVSVGRDTAATSQKGCLEASFPLALGLVLIGFLFAAMSLRQVQYDFRHIFFSLMWAGISIGIAAFVRANGRVFCNRPRLHNPR*






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