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Report for Sequence Feature Glyma.04g115900

Feature Type:gene_model
Chromosome:Gm04
Start:12455635
stop:12466223
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g115900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G56280.1AT CSN6A JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12179KEGG Ubiquitin system JGI N/AIEA
KOG3050 KOG COP9 signalosome, subunit CSN6 JGI N/AIEA
PTHR10540PantherFam EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED JGI N/AIEA
PTHR10540:SF8PantherFam COP9 SIGNALOSOME COMPLEX SUBUNIT 6 JGI N/AIEA
PF01398Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease JGI N/AIEA
PF13012Pfam Maintenance of mitochondrial structure and function JGI N/AIEA

Gene model name correspondences to Glyma.04g115900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g12890 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g115900
>Glyma.04g115900.1 sequence-type=CDS polypeptide=Glyma.04g115900.1.p locus=Glyma.04g115900 id=Glyma.04g115900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCTTCATCGAGTAGCGGATTGACGTTCAAGCTGCACCCTCTGGTGATCGTAAACATCTCGGACCACTACACCAGGGTCAAGTCTCAGATGAACCCAACCCACGCGCCACCGCACAACAACAACAACGCCAACGGCGGCGACGGCGTCGTTTCGCCGCTCTCCCCGCGGGTCTATGGCTGCGTCATAGGGGTCCAGAAGGGCCGCACCGTGGAGATCTTCAACAGCTTCGAACTCCTCTACGATCCTTCCTCCCACTCCCTCGATCGCACCTTCCTCGAGAAGAAGCAAGAACTCTATAAGAAGGTGTTCCCGCACTTCTATATACTGGGGTGGTATTCGACTGGGAGTGATGCAGAGGAATCAGACATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCAGTTTATGTTCTTCTCAATCCTTCTATCAATCATTCTCAGAAGGATCTACCTGTCAGTATTTTTGAAAGTGAACTGCATGTCATAGATGGGATTCCACAACTTATCTTTGTTCGCTCAAGCTATACTATTGAGACTGTTGAAGCAGAACGAATATCAGTTGATCATGTTGCTCATCTTAAGCCATCTGATGGTGGTTCAGCTGCTACACAATTGGCTGCTCACCTTACTGGAATACACAGTGCCATCAAAATGCTTCATAGCAGAATAAAGGTGCTACATCACTATCTTCTTGCAATGCAAAAAGGTGATGTTCCTTGCGAGAATTCACTATTAAGACAAGTGTCAAGTCTCCTGAGAAGATTGCCTGCTATTGAATCTGGCAAATTTCAAGATGATTTCTTGATGGAGTACAATGACACCTTATTGATTAGTTACCTGGCAATGCTGACCAACTGCTCAAGTGCTATGAATGAACTGGTGGACAAATTTAATATTGCGTATGATAGGCATAGCAGAAGGGGTGGACGAACTGCTTTTATGTGA
Predicted protein sequences of Glyma.04g115900
>Glyma.04g115900.1.p sequence-type=predicted peptide transcript=Glyma.04g115900.1 locus=Glyma.04g115900 id=Glyma.04g115900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHNNNNANGGDGVVSPLSPRVYGCVIGVQKGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVDKFNIAYDRHSRRGGRTAFM*






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