SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g105500

Feature Type:gene_model
Chromosome:Gm04
Start:10422143
stop:10426911
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g105500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G55020.1AT ATLOX1,LOX1 JGI N/AIEA
1.13.11.58EC linoleate 9S-lipoxygenase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016702GO-mf oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen JGI N/AIEA
GO:0046872GO-mf metal ion binding JGI N/AIEA
PTHR11771PantherFam LIPOXYGENASE JGI N/AIEA
PF00305Pfam Lipoxygenase JGI N/AIEA

Gene model name correspondences to Glyma.04g105500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g11640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g105500
>Glyma.04g105500.1 sequence-type=CDS polypeptide=Glyma.04g105500.1.p locus=Glyma.04g105500 id=Glyma.04g105500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACTACCTCAAGCAAGGAGTTGTTGTTAAGGATCCATCTGCTCCCCATGGAGTTCGACTTTTGATCAAGGACTATCCTTATGCTTCTGATGGGCTAGAGATATGGGATGCTATCAAGTCTTGGGTGGAAGAATATGTCTCATTCTACTACAAGTTAGATGAGGAACTTCAAAAAGACCCCGAGCTCCAAGCTTGGTGGAAAGAACTTGTAGAGGTGGGTCATGGGGATTTGAAGGATAAGCCATGGTGGCAAAAGATGCAAACTCGTGAAGAGTTGGTTGAAGCTTACGCTACCCTCATATGGATTGCTTCAGCTCTTCATGTTGTTGTTAACTTTGGACAGTATCCACCATATGGAGGTTTAATCCTGAATAGGCCAACTATTAGCAGGAGATTCATGCCTGAGAAAGGGTCTCCTAAATATGATGCGTTGGCTAAGAACCATGAGAAGGAGTTTTTGAAGACTATTACTGGCAAGAAAGAGACCCTCATTGACCTTACAATTATAGAAATTTTATCAAGGCACGCATCTGATGAGTTCTACCTTGGGCAGAGAGATGGTGGTGACTACTGGACTTCTAATGCCGGTCCATTAAAGACCTTTAAGAGAAACCACTATGGGCCGGCTAAAATGCCTTACACTTTGCTCTATCCTTCTAGTGAGGAGGGATTGACTTTCAGAGGAATTCCCAACAGTATCTCTATCTAA
Predicted protein sequences of Glyma.04g105500
>Glyma.04g105500.1.p sequence-type=predicted peptide transcript=Glyma.04g105500.1 locus=Glyma.04g105500 id=Glyma.04g105500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHYLKQGVVVKDPSAPHGVRLLIKDYPYASDGLEIWDAIKSWVEEYVSFYYKLDEELQKDPELQAWWKELVEVGHGDLKDKPWWQKMQTREELVEAYATLIWIASALHVVVNFGQYPPYGGLILNRPTISRRFMPEKGSPKYDALAKNHEKEFLKTITGKKETLIDLTIIEILSRHASDEFYLGQRDGGDYWTSNAGPLKTFKRNHYGPAKMPYTLLYPSSEEGLTFRGIPNSISI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo