Glyma.04g099900

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Report for Sequence Feature Glyma.04g099900

Feature Type:	gene_model
Chromosome:	Gm04
Start:	9132954
stop:	9135203
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.04g099900

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G35160.2	AT	GF14 protein phi chain	JGI	N/A	IEA
AT1G78300.1	AT	general regulatory factor 2	JGI	N/A	IEA
GO:0019904	GO-mf	protein domain specific binding	EnsemblGenomes	N/A	IEA
KOG0841	KOG	Multifunctional chaperone (14-3-3 family)	JGI	N/A	IEA
PTHR18860	Panther	14-3-3 PROTEIN	JGI	N/A	IEA
PF00244	PFAM	14-3-3 protein	JGI	N/A	IEA

Proteins Associated with Glyma.04g099900

Locus	Gene Symbol	Protein Name
	SGF14h	14-3-3 protein SGF14h
	GF14e	GF14 gene family gene e

Expression Patterns of Glyma.04g099900

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.04g099900

Paralog	Evidence	Comments
Glyma.06g101500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.04g099900 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma04g10820	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.04g099900

Limit To All Plant Sequences

>Glyma.04g099900.2 sequence-type=transcript locus=Glyma.04g099900 ID=Glyma.04g099900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACCCTTCCCTTTCGTCGTTCTCCGTCTCCCTCATTTGTTCACTTTCTCTCTCTAAATCCCTAAACCAGATCTCGCACTCGCGCTTTCTCTCTCTAGGATTCGACAATGGCGGCCGCTCCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCCGACAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCTGCCGAGAGCACTCTCTCTGCATACAAAGCCGCTCAGGTTAACCGTTTATTTCTCTTCTTTCTTTTCTGATTTTGCGATTCAGATCTGTTCGGTTTTTGCTCCAGATTTGCGATTGTGCTTTACTGTTTTCCGATTTTTGTTATTCTGACTGTGAAATCTATGTGATTATTTACTCGATGCAGTTCTTTGGAGCGGTTATGCGTTATTCTTTTTCTTGTTTAAAATGTTTTGGCTTAATATGGATTTTAACTGCTGATATTTTCCCATTGCAAATGAAATAATAAAATATCTGCGTGCTTTTATTCTGTACGAATTGGTATGAACGATTTTCGTTGTGGTGCTTTTGTTACTCTATTGGTTTAACGAATGAACATGTTACTTTGTTTTTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTTGGCCTTGCACTTAACTTCTCTGTATTTTACTACGAAATCCTTAACTCTCCCGATCGTGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCTATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATAGCACTCTGATCATGCAACTCCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACAGGATGACCAGTAAAAATATTTTACTGCTAATTAGAATTGAACTTCTCCTCCATATCTTTTTGAAGGGAGAAGGTGTTTGTTGCTAATATCTCTTTGGTACTGAGATTTTAGGCATTCATGTTTGTTATGATTGTGGATGTACTGGGCCGTTTTTAGTTTGTCCTTCCATTTTCAAGTGTTTTGCCAAATTGCCTATTTTATTAAGGACGCTGAAGTTTTTATTATATGGAATTGGAATTTTAAGATTCTTCTCTTCTATCTAGTAAACTTGATGTCACCCGCTTATATTGTGAGGATTAGATATATTTGTATTCTTTTTGAAGCCTCGATATTTAAATTTAGTTTGATTGGAATTGGGTTTGTTCTCGTT

>Glyma.04g099900.3 sequence-type=transcript locus=Glyma.04g099900 ID=Glyma.04g099900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACCCTTCCCTTTCGTCGTTCTCCGTCTCCCTCATTTGTTCACTTTCTCTCTCTAAATCCCTAAACCAGATCTCGCACTCGCGCTTTCTCTCTCTAGGATTCGACAATGGCGGCCGCTCCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCCGACAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCTGCCGAGAGCACTCTCTCTGCATACAAAGCCGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTTGGCCTTGCACTTAACTTCTCTGTATTTTACTACGAAATCCTTAACTCTCCCGATCGTGCCTGCAACCTTGCAAAACAGGTTAGATTCAGATATAGTGAATATCTTGGCCtttgttttgctctgtttatttttgttttACAACATTTTGAGCAATGTTTTGGATGTTTCCCGTGAAAAGAGGAAGGAATTGGGCCCCATACAGTGAAATTTGCAGCTATTATTGTCCATTAATTCGAATAACTTTATGGCTACTCCCATAATGCATTTCGTTAATGTCGAAGCAACAATGATAGCTACTCGTTGGATTCTGGCGGCTAAATATGGAGTTCGCTTTGTACAGTTGTTGCTTACTTTACCTGTAGCTAAAATGAGTTGTCAAATATTTGGTGGATTTCACAGTAGGTGTTTGGAAGTCTAATAATTATAAGCTAGCAAACAACAATCGATCAATTTTTGACTACTTAATCTAGGTACTGGTATAGATGGGAATCTGACCTTAGTAATACCGGTGGAATATATTCTTTTAGTTTTTGATGTGAAAATGTT

Coding sequences of Glyma.04g099900

Limit To All Plant Sequences

>Glyma.04g099900.1 sequence-type=CDS polypeptide=Glyma.04g099900.1.p locus=Glyma.04g099900 ID=Glyma.04g099900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCCGCTCCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCCGACAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCTGCCGAGAGCACTCTCTCTGCATACAAAGCCGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTTGGCCTTGCACTTAACTTCTCTGTATTTTACTACGAAATCCTTAACTCTCCCGATCGTGCCTGCAACCTTGCAAAACAGGCTTTTGATGAAGCTATTGCTGAATTGGATACACTGGGAGAGGAGTCATACAAGGATAGCACTCTGATCATGCAACTCCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGTATTGATTTTAGGTTGCCATAGCTCATCCATCACTTCTTTTTTTATTTCCCTTTTTTGTGTTGTCGACTTATTATTGTGGTTTCAGGATGATGGAGCAGATGAAATTAAAGAAGCAGCACCGAAACAGGATGACCAGTAA

>Glyma.04g099900.2 sequence-type=CDS polypeptide=Glyma.04g099900.2.p locus=Glyma.04g099900 ID=Glyma.04g099900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCCGCTCCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCCGACAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCTGCCGAGAGCACTCTCTCTGCATACAAAGCCGCTCAGGTTAACCGTTTATTTCTCTTCTTTCTTTTCTGA

>Glyma.04g099900.3 sequence-type=CDS polypeptide=Glyma.04g099900.3.p locus=Glyma.04g099900 ID=Glyma.04g099900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCCGCTCCCTCGCCTCGCGAAGAGAACGTGTACATGGCGAAGCTCGCCGAGCAGGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTCTCCGCCGCCGCCGACAACGAGGAGCTCACCGTCGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTGATCGGAGCGCGCCGCGCCTCGTGGCGCATCATCTCCTCGATCGAGCAGAAGGAGGAGAGCCGCGGCAACGAGGACCACGTCTCCGTCATCCGCGACTACCGATCCAAGATCGAGTCCGAGCTCTCCAACATCTGCGACGGTATTCTCAAGCTCCTCGACTCTCGCCTCATTCCCTCCGCTTCCTCCGGCGATTCCAAGGTCTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGTAAGGAGGCTGCCGAGAGCACTCTCTCTGCATACAAAGCCGCTCAGGACATTGCAAATGCCGAACTGCCTCCAACTCATCCAATTAGGCTTGGCCTTGCACTTAACTTCTCTGTATTTTACTACGAAATCCTTAACTCTCCCGATCGTGCCTGCAACCTTGCAAAACAGGTTAGATTCAGATATAGTGAATATCTTGGCCTTTGTTTTGCTCTGTTTATTTTTGTTTTACAACATTTTGAGCAATGTTTTGGATGTTTCCCGTGA

Predicted protein sequences of Glyma.04g099900

Limit To All Plant Sequences

>Glyma.04g099900.1.p sequence-type=predicted peptide transcript=Glyma.04g099900.1 locus=Glyma.04g099900 ID=Glyma.04g099900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVLILGCHSSSITSFFISLFCVVDLLLWFQDDGADEIKEAAPKQDDQ*

>Glyma.04g099900.2.p sequence-type=predicted peptide transcript=Glyma.04g099900.2 locus=Glyma.04g099900 ID=Glyma.04g099900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQVNRLFLFFLF*

>Glyma.04g099900.3.p sequence-type=predicted peptide transcript=Glyma.04g099900.3 locus=Glyma.04g099900 ID=Glyma.04g099900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAAPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQVRFRYSEYLGLCFALFIFVLQHFEQCFGCFP*

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