Report for Sequence Feature Glyma.04g098600
| Feature Type: | gene_model |
| Chromosome: | Gm04 |
| Start: | 8923033 |
| stop: | 8925354 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
|
Annotations for Glyma.04g098600
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT4G09040.1 | AT |
|
JGI | N/A | IEA |
| GO:0003676 | GO-mf |
nucleic acid binding |
JGI | N/A | IEA |
| KOG0105 |
KOG |
Alternative splicing factor ASF/SF2 (RRM superfamily) |
JGI | N/A | IEA |
| KOG0106 |
KOG |
Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) |
JGI | N/A | IEA |
| KOG0114 |
KOG |
Predicted RNA-binding protein (RRM superfamily) |
JGI | N/A | IEA |
| KOG0130 |
KOG |
RNA-binding protein RBM8/Tsunagi (RRM superfamily) |
JGI | N/A | IEA |
| KOG0131 |
KOG |
Splicing factor 3b, subunit 4 |
JGI | N/A | IEA |
| KOG0144 |
KOG |
RNA-binding protein CUGBP1/BRUNO (RRM superfamily) |
JGI | N/A | IEA |
| PTHR24012 | PantherFam |
RNA BINDING PROTEIN |
JGI | N/A | IEA |
| PF00076 | Pfam |
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
JGI | N/A | IEA |
| PF14259 | Pfam |
|
JGI | N/A | IEA |
Gene model name correspondences to Glyma.04g098600 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma04g10650 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.04g098600
>Glyma.04g098600.1 sequence-type=CDS polypeptide=Glyma.04g098600.1.p locus=Glyma.04g098600 id=Glyma.04g098600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCTACTACGTCTTGTTTGCTTAACTTCAACAAATCAGTTATCAACTCAATCCACCTCTTTCTCTTTTCTTCGCAAAACACCCCATTCTCAATCCATCCATATCGATCCCTCTTCCTTTCACTTTCCACGCCTATCCCTTATCACAACCACTCTCACACACGCCCAACAAGCCAACCCTGTTGTCGCCGAAGAAGAATTTTCTCGCACCAGGTTACTCGCTCAGAACGTGCCCTGGACAAGCACCCCCGAAGATATTCGCTCTTTGTTCGAAAAACATGGAAAAGTCCTCCAAGTCGAGCTTTCTATGTATAAGAAAAACAGAAACCGGGGTTTGGCCTTTGTCGAAATGGGTTCCCCAGAAGAAGCACTTGAAGCTCTCAATAATCTCGAATCGTATGAGTTTGAGGGTCGTGTAATCAAAGTCAATTATGCTCGGCCGAAAAAGGAGAAAACGCCGCCCCCTGTGAAACCAAAGGTGGTGACGTTTAACTTGTTTGTTGCCAACTTGTCCTATGAAGCGAGCGCCAAAGATCTCAAGGAGTTTTTTGATTCTGGAACTGGTAAAGTTGTGTCTGCTGAGGTTGTGTATCGTGATAATCCTAGAAGGCCGTCTGGTTATGGATTTGTGTCCTACAAGTCCAAGAAAGAAGCTGAGGCTGCTCTTGCTGAGTTCCAAGGAAAGATTTTTATGGGAAGGCCAATCAGGGTGGATCGGGGTCGGCGATTTGTTCAACAACCTGGGGACGGGAGTGCAAAGTCTGAAGATACACCTTCTGATTTGAGTGTGAATGGGGCAGAAGCTCAACAACCTGCAGAGGGCAGTGCAAAGTCTGAAGATACTCCTTCTGAGTTGAGCGTGAATGGGGAAGAAGCTGACAAAGTTGATTGA
>Glyma.04g098600.4 sequence-type=CDS polypeptide=Glyma.04g098600.4.p locus=Glyma.04g098600 id=Glyma.04g098600.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGCTACTACGTCTTGTTTGCTTAACTTCAACAAATCAGTTATCAACTCAATCCACCTCTTTCTCTTTTCTTCGCAAAACACCCCATTCTCAATCCATCCATATCGATCCCTCTTCCTTTCACTTTCCACGCCTATCCCTTATCACAACCACTCTCACACACGCCCAACAAGCCAACCCTGTTGTCGCCGAAGAAGAATTTTCTCGCACCAGGTTACTCGCTCAGAACGTGCCCTGGACAAGCACCCCCGAAGATATTCGCTCTTTGTTCGAAAAACATGGAAAAGTCCTCCAAGTCGAGCTTTCTATGTATAAGAAAAACAGAAACCGGGGTTTGGCCTTTGTCGAAATGGGTTCCCCAGAAGAAGCACTTGAAGCTCTCAATAATCTCGAATCGTATGAGTTTGAGGGTCGTGTAATCAAAGTCAATTATGCTCGGCCGAAAAAGGAGAAAACGCCGCCCCCTGTGAAACCAAAGGTGGTGACGTTTAACTTGTTTGTTGCCAACTTGTCCTATGAAGCGAGCGCCAAAGATCTCAAGGAGTTTTTTGATTCTGGAACTGGTAAAGTTGTGTCTGCTGAGGTTGTGTATCGTGATAATCCTAGAAGGCCGTCTGGTTATGGATTTGTGTCCTACAAGTCCAAGAAAGAAGCTGAGGCTGCTCTTGCTGAGTTCCAAGGAAAGATTTTTATGGGAAGGCCAATCAGGGTGGATCGGGGTCGGCGATTTGTTCAACAACCTGGGGACGGGAGTGCAAAGTCTGAAGATACACCTTCTGATTTGAGTGTGAATGGGGCAGAAGCTCAACAACCTGCAGAGGGCAGTGCAAAGTCTGAAGATACTCCTTCTGAGTTGAGCGTGAATGGGGAAGAAGCTGACAAAGTTGATTGA
Predicted protein sequences of Glyma.04g098600
>Glyma.04g098600.1.p sequence-type=predicted peptide transcript=Glyma.04g098600.1 locus=Glyma.04g098600 id=Glyma.04g098600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALLRLVCLTSTNQLSTQSTSFSFLRKTPHSQSIHIDPSSFHFPRLSLITTTLTHAQQANPVVAEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVTFNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSDLSVNGAEAQQPAEGSAKSEDTPSELSVNGEEADKVD*
>Glyma.04g098600.4.p sequence-type=predicted peptide transcript=Glyma.04g098600.4 locus=Glyma.04g098600 id=Glyma.04g098600.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MALLRLVCLTSTNQLSTQSTSFSFLRKTPHSQSIHIDPSSFHFPRLSLITTTLTHAQQANPVVAEEEFSRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKKEKTPPPVKPKVVTFNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGYGFVSYKSKKEAEAALAEFQGKIFMGRPIRVDRGRRFVQQPGDGSAKSEDTPSDLSVNGAEAQQPAEGSAKSEDTPSELSVNGEEADKVD*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
