SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g093600

Feature Type:gene_model
Chromosome:Gm04
Start:8291940
stop:8299431
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g093600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G49970.1AT ATPPOX,PDX3,PPOX JGI N/AIEA
1.4.3.5EC pyridoxal 5'-phosphate synthase JGI N/AIEA
5.1.99.6EC NAD(P)H-hydrate epimerase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0010181GO-mf FMN binding JGI N/AIEA
GO:0016638GO-mf oxidoreductase activity, acting on the CH-NH2 group of donors JGI N/AIEA
K00275KEGG Vitamin B6 metabolism JGI N/AIEA
K17759KEGG Enzymes with EC numbers JGI N/AIEA
KOG2586 KOG Pyridoxamine-phosphate oxidase JGI N/AIEA
PTHR13232PantherFam NAD(P)H-HYDRATE EPIMERASE JGI N/AIEA
PTHR13232:SF10PantherFam NAD(P)H-HYDRATE EPIMERASE JGI N/AIEA
PF03853Pfam YjeF-related protein N-terminus JGI N/AIEA
PF10590Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JGI N/AIEA
PF12766Pfam Pyridoxamine 5'-phosphate oxidase JGI N/AIEA

Gene model name correspondences to Glyma.04g093600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g09950 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g093600
>Glyma.04g093600.1 sequence-type=CDS polypeptide=Glyma.04g093600.1.p locus=Glyma.04g093600 id=Glyma.04g093600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCGTTCATTGGTGCCGAAGGGAAGCAGCAGAAGCATGACATGTCTATGCCTTACCCATTCACTCACTCAAACCCATAGCCATAACCTACTGGCTACTACCTTCTCTTCTTCTCTCTATAATAGTAACAACCGTAACCCCCTCTTTCAATTATTCTCCGGTATTCTCCGGCCTCGAATTCGAGCATTTTCCACCGACTTCAGGAGCGCCCCCACACCAACTGCTTCTTCTTCTGCCTTTGCCCAAAGCATGGCGAATTTCGACGCTGATTCCGTCACTTACCTTAAGCAGCGAGATGCCGCGGAGATCGACGAGACACTCATGGGTCCACTTGGCTTCAGCGTTGACCAGCTCATGGAGTTGGCTGGTTTGAGTGTCGCCACTTCCATTTCTGAGGTTTACAAACCGAGTGAGTATAGTCGTGTTCTTACTATATGTGGTCCCGGTAACAATGGTGGTGACGGTCTCGTAGCTGCTCGGCACCTGCATCACTTCGGTTATAAGCCATTTGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCACTGTCAATCCCATTCTTCTCAGTGGAAGAACTACCATCAGATCTTTCAAATGGTTTTGACGTTGTCATAGATGCAATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTCTCTTTACATAATAATAATAATCAAATTGGCCAAAAAAGATCAGTTATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTACAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTAGGTGCAAAGAAGTTTGGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTATACTTCCACCATATCCTGGAACTTCCATGTGTGTTCGAATTGGAAAGCCTCCACGTATTGATATCTCAGCTCTAAGAGAGAACTATATCTCTCCAGAATTTCTTGAAGAGCAGGTGGAGGCTGACCCTTTTAATCAGTTTCATAAATGGTTTAATGATGCATTGGCTGCTGGTTTGAAGGAACCAAATGCTATGTCCTTGTCAACTGTAGGGAAGGACGGAAAACCCTCATCAAGAATGGTATTGCTAAAAGGCTTGGATAAGGAAGGATTTGTGTGGTACACAAACTATGAAAGTCAAAAGGCACGTGAATTATCTGAAAATCCACGTGCATCACTTCTTTTTTACTGGGATGGTTTAAACCGGCAGGTACGGGTGGAAGGGCCTGTTCAGAAAGTCTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGCCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTGCCGGGTAGGCATGTTCTTTATCAGGAGTACAAAGAGCTGGAAGAAAAATACTCTGATGGAAGTTTAATCCCTAAACCTAAGAACTGGGGTGGATATAGGCTAACACCACAACTTTTCGAGTTTTGGCAAGGGCAGAAATCTCGCTTGCATGACAGGTTGCAATATACTCCCCATGAGATCAATGGACAACGGCTGTGGAAGGTTGACCGGTTGGCTCCTTGA

>Glyma.04g093600.2 sequence-type=CDS polypeptide=Glyma.04g093600.2.p locus=Glyma.04g093600 id=Glyma.04g093600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTTCTCTCCGAAATTTTGGCGTTTCTATCTCGCGTTTTGTTTCAGGGTATTCTCCGGCCTCGAATTCGAGCATTTTCCACCGACTTCAGGAGCGCCCCCACACCAACTGCTTCTTCTTCTGCCTTTGCCCAAAGCATGGCGAATTTCGACGCTGATTCCGTCACTTACCTTAAGCAGCGAGATGCCGCGGAGATCGACGAGACACTCATGGGTCCACTTGGCTTCAGCGTTGACCAGCTCATGGAGTTGGCTGGTTTGAGTGTCGCCACTTCCATTTCTGAGGTTTACAAACCGAGTGAGTATAGTCGTGTTCTTACTATATGTGGTCCCGGTAACAATGGTGGTGACGGTCTCGTAGCTGCTCGGCACCTGCATCACTTCGGTTATAAGCCATTTGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCACTGTCAATCCCATTCTTCTCAGTGGAAGAACTACCATCAGATCTTTCAAATGGTTTTGACGTTGTCATAGATGCAATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTCTCTTTACATAATAATAATAATCAAATTGGCCAAAAAAGATCAGTTATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTACAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTAGGTGCAAAGAAGTTTGGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTATACTTCCACCATATCCTGGAACTTCCATGTGTGTTCGAATTGGAAAGCCTCCACGTATTGATATCTCAGCTCTAAGAGAGAACTATATCTCTCCAGAATTTCTTGAAGAGCAGGTGGAGGCTGACCCTTTTAATCAGTTTCATAAATGGTTTAATGATGCATTGGCTGCTGGTTTGAAGGAACCAAATGCTATGTCCTTGTCAACTGTAGGGAAGGACGGAAAACCCTCATCAAGAATGGTATTGCTAAAAGGCTTGGATAAGGAAGGATTTGTGTGGTACACAAACTATGAAAGTCAAAAGGCACGTGAATTATCTGAAAATCCACGTGCATCACTTCTTTTTTACTGGGATGGTTTAAACCGGCAGGTACGGGTGGAAGGGCCTGTTCAGAAAGTCTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGCCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTGCCGGGTAGGCATGTTCTTTATCAGGAGTACAAAGAGCTGGAAGAAAAATACTCTGATGGAAGTTTAATCCCTAAACCTAAGAACTGGGGTGGATATAGGCTAACACCACAACTTTTCGAGTTTTGGCAAGGGCAGAAATCTCGCTTGCATGACAGGTTGCAATATACTCCCCATGAGATCAATGGACAACGGCTGTGGAAGGTTGACCGGTTGGCTCCTTGA

>Glyma.04g093600.3 sequence-type=CDS polypeptide=Glyma.04g093600.3.p locus=Glyma.04g093600 id=Glyma.04g093600.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCGTTCATTGGTGCCGAAGGGAAGCAGCAGAAGCATGACATGTCTATGCCTTACCCATTCACTCACTCAAACCCATAGCCATAACCTACTGGCTACTACCTTCTCTTCTTCTCTCTATAATAGTAACAACCGTAACCCCCTCTTTCAATTATTCTCCGGTATTCTCCGGCCTCGAATTCGAGCATTTTCCACCGACTTCAGGAGCGCCCCCACACCAACTGCTTCTTCTTCTGCCTTTGCCCAAAGCATGGCGAATTTCGACGCTGATTCCGTCACTTACCTTAAGCAGCGAGATGCCGCGGAGATCGACGAGACACTCATGGGTCCACTTGGCTTCAGCGTTGACCAGCTCATGGAGTTGGCTGGTTTGAGTGTCGCCACTTCCATTTCTGAGGTTTACAAACCGAGTGAGTATAGTCGTGTTCTTACTATATGTGGTCCCGGTAACAATGGTGGTGACGGTCTCGTAGCTGCTCGGCACCTGCATCACTTCGGTTATAAGCCATTTGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCACTGTCAATCCCATTCTTCTCAGTGGAAGAACTACCATCAGATCTTTCAAATGGTTTTGACGTTGTCATAGATGCAATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCTTTTGATGATTTGATCCAGAGACTTGTCTCTTTACATAATAATAATAATCAAATTGGCCAAAAAAGATCAGTTATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTACAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTAGGTGCAAAGAAGTTTGGTGGTCCTCACCACTTTCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTATACTTCCACCATATCCTGGAACTTCCATGTGTGTTCGAATTGGAAAGCCTCCACGTATTGATATCTCAGCTCTAAGAGAGAACTATATCTCTCCAGAATTTCTTGAAGAGCAGGTGGAGGCTGACCCTTTTAATCAGTTTCATAAATGGTTTAATGATGCATTGGCTGCTGGTTTGAAGGAACCAAATGCTATGTCCTTGTCAACTGTAGGGAAGGACGGAAAACCCTCATCAAGAATGGTATTGCTAAAAGGCTTGGATAAGGAAGGATTTGTGTGGTACACAAACTATGAAAGTCAAAAGGCACGTGAATTATCTGAAAATCCACGTGCATCACTTCTTTTTTACTGGGATGGTTTAAACCGGCAGGTACGGGTGGAAGGGCCTGTTCAGAAAGTCTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGCCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTGCCGGGTAGGCATGTTCTTTATCAGGAGTACAAAGAGCTGGAAGAAAAATACTCTGATGGGTTGCAATATACTCCCCATGAGATCAATGGACAACGGCTGTGGAAGGTTGACCGGTTGGCTCCTTGA
Predicted protein sequences of Glyma.04g093600
>Glyma.04g093600.1.p sequence-type=predicted peptide transcript=Glyma.04g093600.1 locus=Glyma.04g093600 id=Glyma.04g093600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRSLVPKGSSRSMTCLCLTHSLTQTHSHNLLATTFSSSLYNSNNRNPLFQLFSGILRPRIRAFSTDFRSAPTPTASSSAFAQSMANFDADSVTYLKQRDAAEIDETLMGPLGFSVDQLMELAGLSVATSISEVYKPSEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFFSVEELPSDLSNGFDVVIDAMFGFSFHGSPRPPFDDLIQRLVSLHNNNNQIGQKRSVIVSVDIPSGWHVEEGDVDGTGIKPDMLVSLTAPKLGAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPRIDISALRENYISPEFLEEQVEADPFNQFHKWFNDALAAGLKEPNAMSLSTVGKDGKPSSRMVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQVRVEGPVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLYQEYKELEEKYSDGSLIPKPKNWGGYRLTPQLFEFWQGQKSRLHDRLQYTPHEINGQRLWKVDRLAP*

>Glyma.04g093600.2.p sequence-type=predicted peptide transcript=Glyma.04g093600.2 locus=Glyma.04g093600 id=Glyma.04g093600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLLSEILAFLSRVLFQGILRPRIRAFSTDFRSAPTPTASSSAFAQSMANFDADSVTYLKQRDAAEIDETLMGPLGFSVDQLMELAGLSVATSISEVYKPSEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFFSVEELPSDLSNGFDVVIDAMFGFSFHGSPRPPFDDLIQRLVSLHNNNNQIGQKRSVIVSVDIPSGWHVEEGDVDGTGIKPDMLVSLTAPKLGAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPRIDISALRENYISPEFLEEQVEADPFNQFHKWFNDALAAGLKEPNAMSLSTVGKDGKPSSRMVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQVRVEGPVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLYQEYKELEEKYSDGSLIPKPKNWGGYRLTPQLFEFWQGQKSRLHDRLQYTPHEINGQRLWKVDRLAP*

>Glyma.04g093600.3.p sequence-type=predicted peptide transcript=Glyma.04g093600.3 locus=Glyma.04g093600 id=Glyma.04g093600.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRSLVPKGSSRSMTCLCLTHSLTQTHSHNLLATTFSSSLYNSNNRNPLFQLFSGILRPRIRAFSTDFRSAPTPTASSSAFAQSMANFDADSVTYLKQRDAAEIDETLMGPLGFSVDQLMELAGLSVATSISEVYKPSEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFFSVEELPSDLSNGFDVVIDAMFGFSFHGSPRPPFDDLIQRLVSLHNNNNQIGQKRSVIVSVDIPSGWHVEEGDVDGTGIKPDMLVSLTAPKLGAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPRIDISALRENYISPEFLEEQVEADPFNQFHKWFNDALAAGLKEPNAMSLSTVGKDGKPSSRMVLLKGLDKEGFVWYTNYESQKARELSENPRASLLFYWDGLNRQVRVEGPVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVPGRHVLYQEYKELEEKYSDGLQYTPHEINGQRLWKVDRLAP*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo