SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g086300

Feature Type:gene_model
Chromosome:Gm04
Start:7319676
stop:7325090
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g086300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G25880.1AT ATNADP-ME3,NADP-ME3 JGI N/AIEA
1.1.1.40EC malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+) JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0004471GO-mf malate dehydrogenase (decarboxylating) (NAD+) activity JGI N/AIEA
GO:0051287GO-mf NAD binding JGI N/AIEA
K00029KEGG PPAR signaling pathway JGI N/AIEA
PTHR23406PantherFam MALIC ENZYME-RELATED JGI N/AIEA
PF00390Pfam Malic enzyme, N-terminal domain JGI N/AIEA
PF03949Pfam Malic enzyme, NAD binding domain JGI N/AIEA

Gene model name correspondences to Glyma.04g086300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g09110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g086300
>Glyma.04g086300.1 sequence-type=CDS polypeptide=Glyma.04g086300.1.p locus=Glyma.04g086300 id=Glyma.04g086300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGTAAGGGACTTGTATGGAGAGGATTGTGCCACAGAGGACCAGCTTATCACCCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTGCTGAGAGATCCACGCTACAACAAAGGACTGGCCTTTACTGAGGGAGAGAGAGATGCCCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAGCTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTTGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA

>Glyma.04g086300.2 sequence-type=CDS polypeptide=Glyma.04g086300.2.p locus=Glyma.04g086300 id=Glyma.04g086300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTGGCTCAATAGGCACAGGCACAACATTAATATTCTGCTACCACCTACAAAAGGACTAGTACAAAAGTTGTTGGCAGTGACCATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGTAAGGGACTTGTATGGAGAGGATTGTGCCACAGAGGACCAGCTTATCACCCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTGCTGAGAGATCCACGCTACAACAAAGGACTGGCCTTTACTGAGGGAGAGAGAGATGCCCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAGCTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTTGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA

>Glyma.04g086300.3 sequence-type=CDS polypeptide=Glyma.04g086300.3.p locus=Glyma.04g086300 id=Glyma.04g086300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGAGCACTTCGTTGAAGGAGATGAGGAACGGTGGTGAGGATTATAGCAATGGTCATGGTGGTGGTGTAAGGGACTTGTATGGAGAGGATTGTGCCACAGAGGACCAGCTTATCACCCCATGGACTTTCTCTGTGGCCAGTGGATGCAGTTTGCTGAGAGATCCACGCTACAACAAAGGACTGGCCTTTACTGAGGGAGAGAGAGATGCCCATTACTTGCGTGGCCTTTTGCCTCCAGCTGTCTTCAATCAAGAACTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAGCTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTTGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA

>Glyma.04g086300.4 sequence-type=CDS polypeptide=Glyma.04g086300.4.p locus=Glyma.04g086300 id=Glyma.04g086300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCACAATCTTCGCCAGTATGAGGTTCCTCTACATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTCTGATCGATAATGTTGAGGAACTGCTTCCTGTTGTTTACACTCCAACTGTTGGAGAAGCATGCCAGAAATACGGAAGTATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTTGAAGTACTGAAAAACTGGCCAGAAAAGAGTATTCAAGTTATTGTTGTGACTGATGGTGAGCGTATATTAGGACTTGGAGATCTTGGTTGCCAGGGTATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACGGCTTTAGGAGGTGTCCGCCCTTCATCTTGCTTGCCAATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGACTTAAACAAAAGCGGGCAGCTGGGCAGGAATATGCGGAGCTTCTAGAGGAGTTCATGCGCGCAGTTAAGCAGAATTATGGGGAGAAAGTTCTCGTACAGTTTGAGGATTTTGCCAATCATAATGCATTTGATCTGCTGGAAAAATACAGCTCATCTCATCTTGTTTTCAACGATGATATACAGGGTACAGCATCTGTGGTATTAGCAGGATTGCTTGCATCCCTGAAATTAGTTGGGGGGACCTTAGCTGACCATACCTTCTTATTCCTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACTAAAGCTCCAGTGGAAAAGACCCGCAAGAAGATATGGCTCGTGGACTCAAAGGGACTTATTGTTAGCTCTCGATTGGAATCACTTCAGCACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTTAAGACTCTTCTAGATGCCGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCATCTGGAGCAGGGAAGACATTTACCAAGGAGGTGGTTGAAACCATGGCATCCCTGAATGAGAAACCACTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACGGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATCTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTTCCTGGTTTTGGCTTGGGTTTGATCATTTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGGCTGATTTACCCTCCATTCTCAAACATCAGAAAGATATCAGCCCACATTGCTGCTAAAGTCGCAACTAAGGCATATGATCTAGGTCTGGCTTCTCATCTGCCTCGACCTAAGGATCTTGTCAAATATGCAGAAAGTTGCATGTACAGCCCAGGCTACCGTAGCTACCGTTGA
Predicted protein sequences of Glyma.04g086300
>Glyma.04g086300.1.p sequence-type=predicted peptide transcript=Glyma.04g086300.1 locus=Glyma.04g086300 id=Glyma.04g086300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSTSLKEMRNGGEDYSNGHGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRAAGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR*

>Glyma.04g086300.2.p sequence-type=predicted peptide transcript=Glyma.04g086300.2 locus=Glyma.04g086300 id=Glyma.04g086300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMWLNRHRHNINILLPPTKGLVQKLLAVTMSSTSLKEMRNGGEDYSNGHGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRAAGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR*

>Glyma.04g086300.3.p sequence-type=predicted peptide transcript=Glyma.04g086300.3 locus=Glyma.04g086300 id=Glyma.04g086300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSTSLKEMRNGGEDYSNGHGGGVRDLYGEDCATEDQLITPWTFSVASGCSLLRDPRYNKGLAFTEGERDAHYLRGLLPPAVFNQELQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRAAGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR*

>Glyma.04g086300.4.p sequence-type=predicted peptide transcript=Glyma.04g086300.4 locus=Glyma.04g086300 id=Glyma.04g086300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLKQKRAAGQEYAELLEEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEKTRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHEPVKTLLDAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAAKVATKAYDLGLASHLPRPKDLVKYAESCMYSPGYRSYR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo