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Report for Sequence Feature Glyma.04g083500

Feature Type:gene_model
Chromosome:Gm04
Start:7017029
stop:7023020
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g083500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G63520.1AT ATCCD1,ATNCED1,CCD1,NCED1 JGI N/AIEA
1.13.11.51EC 9-cis-epoxycarotenoid dioxygenase JGI N/AIEA
K11159KEGG Enzymes with EC numbers JGI N/AIEA
KOG1285 KOG Beta, beta-carotene 15,15'-dioxygenase and related enzymes JGI N/AIEA
PTHR10543PantherFam BETA-CAROTENE DIOXYGENASE JGI N/AIEA
PTHR10543:SF30PantherFam OS09G0321200 PROTEIN JGI N/AIEA
PF03055Pfam Retinal pigment epithelial membrane protein JGI N/AIEA

Gene model name correspondences to Glyma.04g083500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g08854 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g083500
>Glyma.04g083500.1 sequence-type=CDS polypeptide=Glyma.04g083500.1.p locus=Glyma.04g083500 id=Glyma.04g083500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAACGCATATGGCATTGGCAGCTTCATACATGACTCTTGCACCTAAATACTGCTGCGTTCAGAAACGACCCTTTATCATAACTTCAGGACTTTCCTCCGCCTTCAAGCCGATCTTAAGAGCGTTGCCTCAAATTCCACTGCAAATTGATGCTTCCAAAACCTTCACAGACATCAAATCGAAATTTCTTAACGCCGTTGTGGATTCAGCATTTGAGTTTGTCGACCAGCTTGTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTAGGGGAAGCCGTGGCTATCACTAACATTGAAGGTGACATACCAGATCACTTTCCAGAGGGTGTCTTCATTAGAAATGGACCAAACCCACTCTTTGGAGGATTGAAATCATCCAAGTCTATCTTGGGGAGGACAAATAGCGTGTGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAGGGAAAGTGACGGGTGCTACACCATCGTCTACAACAACAGATATGTTGAAACTGAAACTTACAAGCTTGAGAAACAAAGTGCCAAGCCTTTGTTTCTCCCTGCCGTAAAAGGAGATTCATTGGCCGTTTTGTCTTCTATGCTTCTAAACGGGTTGAGATTTGGACAACTGAATAAAGATTATAGCAACACCAATGTGTTTGAGCATTCGGGCAAGTTCTACTCGGTTTCGGAGAATCACATGCCGCAAGAAATTGACATCTACACACTAAGTACATTGAAATACTGGGATGTCAATGGAGCATGCAATCGTCCTTTCGCCAGTCACCCCAAGAAAGTTCCAGGCACAGGAGAGCTGGTTATTTTTGGCGTAGATGCAACTAAACCTTATCTTGAAATTGGAATAGTTTCTGCTGATGGAAAGGAATTAGTTCATAAAGAAGACATAAAACTAGACAGATGCTCTTTATGCCATGATATAGGTATCACAAGCAGGTATATAGCGATATTGGATCTTCCACTGATTGTAGATTCAAACAGACTACTTAAAAGAGGCCCATTAATCAAGTACGAGAAGGAAAAATATGCCAGGATTGGGATAATGCCACTCTATGGTGATGAAAAATCAACCCAGTGGTTTGAGGTGGAACCTAATAGCACATTTCATATCATCAATTCCTTTGAGGATGGTCATGAGGTTGTGTTGTGGGGTTGTAGAGCATTAGATTCAATAATTCCAGGACCTGAAGATGGTCTAAATGAATCTACGATGTTCTCTCGGTGTTATGAATGGCGATTAAACATAAAAAGTGGGGAGGTTAAGGAAAAATATATCACTGGACCAGAACAGTTTATGGATTTTCCCGTAATTAATGCAAGTTTTACAGGAATTAAGAATAGATACGGATACACACAAGTGGTTGATCCCGCTGCAAGTTATGCTGCAGATATTCCTAAATATGGAGCTTTAGCGAAGCTATACTTTAGAGAACCATGTTCAGAATTTCCAAAGGGAGATACACAACAAAAGCCTATAAGGGTGGAATACCATAGGTTTGAAAGAAACGTATTTTGCACTGGATCTGCCTTTGTCCCTAAAGAAGGTGGTATTGAAGAAGATGATGGTTGGATAATCACTTTTGTTCACAATGAAGATACCGGCATATCTCAAGTTCATATAATTGAAACAAAGAAGTTTTCTGGTGAGGCAGTTGCCAAAATTACCATGCCTTTCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCACTCTCATTGTAG
Predicted protein sequences of Glyma.04g083500
>Glyma.04g083500.1.p sequence-type=predicted peptide transcript=Glyma.04g083500.1 locus=Glyma.04g083500 id=Glyma.04g083500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METHMALAASYMTLAPKYCCVQKRPFIITSGLSSAFKPILRALPQIPLQIDASKTFTDIKSKFLNAVVDSAFEFVDQLVLPSQSNFAPVEELGEAVAITNIEGDIPDHFPEGVFIRNGPNPLFGGLKSSKSILGRTNSVWVEGEGMLHALYFKRESDGCYTIVYNNRYVETETYKLEKQSAKPLFLPAVKGDSLAVLSSMLLNGLRFGQLNKDYSNTNVFEHSGKFYSVSENHMPQEIDIYTLSTLKYWDVNGACNRPFASHPKKVPGTGELVIFGVDATKPYLEIGIVSADGKELVHKEDIKLDRCSLCHDIGITSRYIAILDLPLIVDSNRLLKRGPLIKYEKEKYARIGIMPLYGDEKSTQWFEVEPNSTFHIINSFEDGHEVVLWGCRALDSIIPGPEDGLNESTMFSRCYEWRLNIKSGEVKEKYITGPEQFMDFPVINASFTGIKNRYGYTQVVDPAASYAADIPKYGALAKLYFREPCSEFPKGDTQQKPIRVEYHRFERNVFCTGSAFVPKEGGIEEDDGWIITFVHNEDTGISQVHIIETKKFSGEAVAKITMPFRVPYGFHGAFMPLSL*






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