SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g077400

Feature Type:gene_model
Chromosome:Gm04
Start:6475482
stop:6479353
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g077400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G31300.3AT PBA1 JGI N/AIEA
3.4.25.1EC proteasome endopeptidase complex JGI N/AIEA
GO:0051603GO-bp proteolysis involved in cellular protein catabolic process JGI N/AIEA
GO:0005839GO-cc proteasome core complex JGI N/AIEA
GO:0004298GO-mf threonine-type endopeptidase activity JGI N/AIEA
K02738KEGG Proteasome JGI N/AIEA
KOG0174 KOG 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3 JGI N/AIEA
PTHR11599PantherFam PROTEASOME SUBUNIT ALPHA/BETA JGI N/AIEA
PTHR11599:SF4PantherFam PROTEASOME SUBUNIT BETA JGI N/AIEA
PF00227Pfam Proteasome subunit JGI N/AIEA

Gene model name correspondences to Glyma.04g077400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g08200 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g077400
>Glyma.04g077400.1 sequence-type=CDS polypeptide=Glyma.04g077400.1.p locus=Glyma.04g077400 id=Glyma.04g077400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCAGAAGGTCGATTTCAGCGCTCCCCATTCCATGGGAACCACTATCATCGGCGTTACTTACAACGGCGGTGTCGTTCTCGGAGCCGACTCTCGAACCAGCACCGGAGTGTATGTTGCCAACCGAGCATCGGACAAAATCACTCAGCTCACTGATAATGTATACGTGTGTCGCTCTGGATCGGCTGCTGATTCTCAGATTGTCTCTGATTATGTGCGTTACTTCCTCCATCAACACACAATACAACTTGGACAACCTGCAACAGTTAAAGTTGCTGCAAACCTTGTCCGACTTCTCTCATATAACAATAAGAATTTCTTAGAGACCGGGTTAATTGTTGGTGGATGGGATAAATATGAAGGTGGACAAATTTATGGAGTTCCTCTGGGTGGAACAATAGTACAACAACCTTTTGCTATCGGAGGATCTGGCTCCAGTTACTTGTATGGTTTCTTTGACCAAGCCTGGAAAGAGGGAATGACCAAGGATGAAGCTGAGGATTTAGTAAAAAAGGCTGTTTCACTGGCTATTGCTCGTGATGGTGCAAGTGGTGGGGTTGTCCGAACAGTCATAATAAACTCAGAGGGAGTGACCAGGAATTTCTACCCTGGCGACCAACTTCCATTATGGCACGAGGAAATGGAGCCCCACAACTCCTTGCTAGACATTCTTGGTGCCCCAGAGCCGATGAGCATGTGA
Predicted protein sequences of Glyma.04g077400
>Glyma.04g077400.1.p sequence-type=predicted peptide transcript=Glyma.04g077400.1 locus=Glyma.04g077400 id=Glyma.04g077400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDQKVDFSAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDQLPLWHEEMEPHNSLLDILGAPEPMSM*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo