Report for Sequence Feature Glyma.04g077300
Feature Type: gene_model
Chromosome: Gm04
Start: 6495029
stop: 6497573
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.04g077300
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G31290.1 AT
ChaC-like family protein
JGI N/A IEA
GO:0006751 GO-bp
glutathione catabolic process
EnsemblGenomes N/A IEA
GO:0005737 GO-cc
cytoplasm
EnsemblGenomes N/A IEA
GO:0003839 GO-mf
gamma-glutamylcyclotransferase activity
EnsemblGenomes N/A IEA
KOG3182
KOG
Predicted cation transporter
JGI N/A IEA
PTHR12192 Panther
CATION TRANSPORT PROTEIN CHAC-RELATED
JGI N/A IEA
PF04752 PFAM
ChaC-like protein
JGI N/A IEA
Expression Patterns of Glyma.04g077300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.04g077300
Paralog Evidence Comments
Glyma.06g078400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.04g077300 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma04g08190 Wm82.a1.v1.1 IGC As supplied by JGI
Coding sequences of Glyma.04g077300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.04g077300.1 sequence-type=CDS polypeptide=Glyma.04g077300.1.p locus=Glyma.04g077300 ID=Glyma.04g077300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTTTCTGGGTTTTTGGCTACGGTTCACTGGTGTGGAACCCTGGATTCGATTACGACGAGAAGATTATTGGTTTCATCAAGGACTACAGACGCGTGTTTGATTTAGCGTGCATTGATCACCGGGGAACGCCTGAAAACCCAGCGAGAACTTGCACATTGGAGGAGAAAGAAGGGGCTATTTGCTGGGGAGCTGCTTATTGTGTTCGAGGAGGCCCTGAAAAGGAAAAATTGGCTATGCAGTATTTGGAGCGACGGGAATGTGAATATGACAGAAAGACTCTTGTAAACTTCTTCAAGGAAGGAGATTCACTGCATCCTACTTTAACTGATGTAATAGTATTCACATCTACTCCAGACAAAGTGAACAACAAATACTACCTGGGACCTGCTCCACTTGAAGACATGGCTAGGCAAATAGCAACTGCATACGGCCCTTGCGGAAACAACAGGGATTACATTTTCCTTCTAGAAAAGGCCATGCATGATATTGGCCATGAGGATGACTTGGTGATAGAGCTTGCCAATGAAGTGAAGAAAGTACTTGGAGTGGGAAATGTAGTACCAAAGGAGAAGAAACAGGTTGGAGCAGCACAACTTCCACACCCTCCTCATGTGCCAATCCCTACCCTTCAACTGCTCCCGCTGCCAGAACCTATTGCTTTGGATAGCTGA
Predicted protein sequences of Glyma.04g077300
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.04g077300.1.p sequence-type=predicted peptide transcript=Glyma.04g077300.1 locus=Glyma.04g077300 ID=Glyma.04g077300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVFWVFGYGSLVWNPGFDYDEKIIGFIKDYRRVFDLACIDHRGTPENPARTCTLEEKEGAICWGAAYCVRGGPEKEKLAMQYLERRECEYDRKTLVNFFKEGDSLHPTLTDVIVFTSTPDKVNNKYYLGPAPLEDMARQIATAYGPCGNNRDYIFLLEKAMHDIGHEDDLVIELANEVKKVLGVGNVVPKEKKQVGAAQLPHPPHVPIPTLQLLPLPEPIALDS*