SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g074500

Feature Type:gene_model
Chromosome:Gm04
Start:6184970
stop:6190378
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g074500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G24850.1AT CRY3 JGI N/AIEA
4.1.99.13EC (6-4)DNA photolyase JGI N/AIEA
K01669KEGG DNA repair and recombination proteins JGI N/AIEA
KOG0133 KOG Deoxyribodipyrimidine photolyase/cryptochrome JGI N/AIEA
PTHR11455PantherFam CRYPTOCHROME JGI N/AIEA
PTHR11455:SF22PantherFam CRYPTOCHROME DASH JGI N/AIEA
PF00875Pfam DNA photolyase JGI N/AIEA
PF03441Pfam FAD binding domain of DNA photolyase JGI N/AIEA

Gene model name correspondences to Glyma.04g074500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g07870 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g074500
>Glyma.04g074500.1 sequence-type=CDS polypeptide=Glyma.04g074500.1.p locus=Glyma.04g074500 id=Glyma.04g074500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCATTCTCCACTGCACGTCACTGCCATTTCTTTCTCTGAGAACCACCATCAGTTCCTCCAAGTCCACGTTAACCTCAACGAGAATTCCGTTGTTCCTAGCGATGAACTCGTTCGCCAAATCAGAACCCGTGTCATCCTCAGCCTCTTCATCATCATCAACGTACCAGCAGGTGCCGGAGCAAGATGCTAATAACGACTTGGACCGCGTAGCAGACAACACGTTTCGCAGGTACACGTCCAACGTTACCAAGGGGAGTGGCAAAGGAACAGCCATTGTCTGGTTCAGGAACGATCTCAGAGTTTTGGATAACGAGGCTCTCTATAAGGCATGGCTTTCCTCCGAAACCGTGTTACCTGTCTATTGTGTTGATCCTCGACTCTTTGCCACTACTTATCATTTCGGCTTTCCGAAAACCGGTGCATTGAGAGCGCAATTTCTCCTTGAATGCTTGGCTGACTTGAGGAAGAATTTGATGAAAAGAGGACTAAATTTGCTTGTACAACATGGGAAGCCTGAGGAAATCCTTCCTTCTCTTGCAAAATCTTTTCAAGCTCATACAGTGTATGCACAGAAAGAAACTTGCAGTGAGGAGCTGAATGTTGAAAGGTTAGTCATGAGAGGTCTTAAACAAGTTGTGACATCACCTGAGGAGTCCAGTGGTATCACAGTTTCAAACAACATCCCTAAGCTGCAACTAGTTTGGGGCACCACCATGTACCACCTTGATGACCTTCCTTTTGATGCTACTAGTTTGCCAGATGTGTATACTCAATTTCGTAAGCTTGTTGAAACCAAATGTACTATACGCTCATGCATCAAACTACCAGCATCTCTTGGACCACCTCCCACAGTTCAGGATTGGGGATGCCTTCCTTCATTAGAGCAGCTGGGACTTAGCTCACAGAGTGTTAACAAAGGGATGAAGTTTGTGGGGGGTGAAACTGCAGCATTGAGCAGAGTATATGAATACTTTTGGAAGAAGGACTTGCTGAGGGTATATAAAGAGACCAGGAATGGGATGTTGGGGCCTGATTATTCTACCAAATTCTCACCATGGCTTGCCTCAGGAAGTTTGTCTCCTCGTTTCATATATGAAGAGGTGAAGAGATATGAGAATGATAGACTAGCAAATAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTACTTTAGGTTTTTGTCAGTGAAATATGGGAATTCGCTTTTCCATTTAGGTGGTCCTAGGAAAGTTCAGCGCAACTGGAGCCAAGACAAGAATTTGTTTGAATCCTGGAGAGATGGTTGTACTGGGTATCCTCTGATAGATGCCAATATGAAAGAATTATCAACTACAGGATTTATGTCAAATCGAGGACGGCAGATTGTGTGTTCATTTCTTGTTCGTGATATGGGCATTGATTGGCGCATGGGAGCAGAATGGTTTGAGACATGTCTTTTGGATTATGATCCATGTTCTAATTATGGAAACTGGACTTATGGATCAGGAGTTGGGAATGATCCCAGAGAAGATCGTTATTTCAGCATCCCAAAACAAGCACAAACGTATGACCCTGAAGGTGAGTATGTTGCATACTGGTTGCCGCAGTTGCGAAAAATCCCAAAGGAGAAAAGAAACTTTCCTGGAAATTTAATATACATTCCTCAAATTGTGCCTCTCAAGTTTGGAACAACTAGTGGACACAATAAGGACAAGTTCTTTGGTGCAAGAAGAACCAACGATAGAGGAAGTAAAAGAAGATAG
Predicted protein sequences of Glyma.04g074500
>Glyma.04g074500.1.p sequence-type=predicted peptide transcript=Glyma.04g074500.1 locus=Glyma.04g074500 id=Glyma.04g074500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAILHCTSLPFLSLRTTISSSKSTLTSTRIPLFLAMNSFAKSEPVSSSASSSSSTYQQVPEQDANNDLDRVADNTFRRYTSNVTKGSGKGTAIVWFRNDLRVLDNEALYKAWLSSETVLPVYCVDPRLFATTYHFGFPKTGALRAQFLLECLADLRKNLMKRGLNLLVQHGKPEEILPSLAKSFQAHTVYAQKETCSEELNVERLVMRGLKQVVTSPEESSGITVSNNIPKLQLVWGTTMYHLDDLPFDATSLPDVYTQFRKLVETKCTIRSCIKLPASLGPPPTVQDWGCLPSLEQLGLSSQSVNKGMKFVGGETAALSRVYEYFWKKDLLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIYEEVKRYENDRLANSSTYWVLFELIWRDYFRFLSVKYGNSLFHLGGPRKVQRNWSQDKNLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPQLRKIPKEKRNFPGNLIYIPQIVPLKFGTTSGHNKDKFFGARRTNDRGSKRR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo