SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g072300

Feature Type:gene_model
Chromosome:Gm04
Start:6005003
stop:6009786
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g072300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11450.1AT JGI N/AIEA
1.10.3.9EC photosystem II JGI N/AIEA
GO:0015979GO-bp photosynthesis JGI N/AIEA
GO:0009523GO-cc photosystem II JGI N/AIEA
GO:0009654GO-cc photosystem II oxygen evolving complex JGI N/AIEA
GO:0019898GO-cc extrinsic component of membrane JGI N/AIEA
GO:0005509GO-mf calcium ion binding JGI N/AIEA
PTHR31407PantherFam FAMILY NOT NAMED JGI N/AIEA
PTHR31407:SF7PantherFam PSBP DOMAIN-CONTAINING PROTEIN 5, CHLOROPLASTIC JGI N/AIEA
PF01789Pfam PsbP JGI N/AIEA

Gene model name correspondences to Glyma.04g072300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g07610 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g072300
>Glyma.04g072300.1 sequence-type=CDS polypeptide=Glyma.04g072300.1.p locus=Glyma.04g072300 id=Glyma.04g072300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTTTTCCTTCTTCCTCCCTCTCCCTCCCCCTCTCGTTCTTCCCCATTCCCACTCTGCTACCTAATAACCTCATCTTCAGAAACAATAACTGGACAATCCTTAACCAACGCAAATGCCCATTGTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTGGGGCTTACTTCGCTCTCTCTACCAATGCCACTTTCAGTGACTCTTGCTGAAGAAGAACCGAAAATGGCTTCATTTCTTGATGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTGCCTTCCGATAATTTTTCCTTCAAATGGATTGAATCCAGAAAGCCTGAACGATATTCATCAGCAGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACTTTATTGATAATGTTATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTGAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACTTCAAGTCAGCGCTTAGAAGAGAGTTCAGTCCTTAATACTCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAGTACCTTGTTCGTAAAGCACCTTTGAGACTTACTGATGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCTCGGTGGGAAAAACTCGGTCCTTTCCTTGATAAAGCGGTGAGTTCGTTTCGTCTTCTTAGTCCAACAGAAAATTATGTTCCTCCGTACAAAGATCCCTGGAGATTTTGGTGA

>Glyma.04g072300.4 sequence-type=CDS polypeptide=Glyma.04g072300.4.p locus=Glyma.04g072300 id=Glyma.04g072300.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTTTTCCTTCTTCCTCCCTCTCCCTCCCCCTCTCGTTCTTCCCCATTCCCACTCTGCTACCTAATAACCTCATCTTCAGAAACAATAACTGGACAATCCTTAACCAACGCAAATGCCCATTGTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTGGGGCTTACTTCGCTCTCTCTACCAATGCCACTTTCAGTGACTCTTGCTGAAGAAGAACCGAAAATGGCTTCATTTCTTGATGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTGCCTTCCGATAATTTTTCCTTCAAATGGATTGAATCCAGAAAGCCTGAACGATATTCATCAGCAGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACTTTATTGATAATGTTATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTGAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACTTCAAGTCAGCGCTTAGAAGAGAGTTCAGTCCTTAATACTCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAGTACCTTGTTCGTAAAGCACCTTTGAGACTTACTGATGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTTATTTGTACTCTATCAGTGCTTCAACCGTCAGCCCTCGGTGGGAAAAACTCGGTCCTTTCCTTGATAAAGCGGCGTGA

>Glyma.04g072300.6 sequence-type=CDS polypeptide=Glyma.04g072300.6.p locus=Glyma.04g072300 id=Glyma.04g072300.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTTTTCCTTCTTCCTCCCTCTCCCTCCCCCTCTCGTTCTTCCCCATTCCCACTCTGCTACCTAATAACCTCATCTTCAGAAACAATAACTGGACAATCCTTAACCAACGCAAATGCCCATTGTCCGAGGAAAGACCACGCTTTTCATGTTGTGCTCTAAAACCCACTTCACAAAACAGGATTTTTAGAAGGGATTTGATGCTGTTGGGGCTTACTTCGCTCTCTCTACCAATGCCACTTTCAGTGACTCTTGCTGAAGAAGAACCGAAAATGGCTTCATTTCTTGATGAAATAAATGCCTATTCTTATATGTACCCTGTTGAGTTGCCTTCCGATAATTTTTCCTTCAAATGGATTGAATCCAGAAAGCCTGAACGATATTCATCAGCAGCACCACTTTCTCCTGATGCACGCCTGCGCATTGTGTCTGAGCGTGTTGACTTTATTGATAATGTTATCATTTCTGTCACGATAGGTCCACCAAATTCAAGCTATATAAAATCAAAGGATAAGAGTGAATGGACTGCAAAAGATGTTGCTGATTCAGTTTTAGCTGACAGATCTTCACTGCGAGTTACTTCAAGTCAGCGCTTAGAAGAGAGTTCAGTCCTTAATACTCATTCTAGTGAAATTGATGGTGAGATGTACTGGTATTATGAGTACCTTGTTCGTAAAGCACCTTTGAGACTTACTGATGAATCAAGCACTTACAGGCATTATCTTGCTTCAACAGCTGAAAGAGATGGTATATTTTCAATTTGTTTTTTCATTGGTATAGATTATTTCTACCTTTGCACATCTAATATGAGACTGTCTGCATATTGA
Predicted protein sequences of Glyma.04g072300
>Glyma.04g072300.1.p sequence-type=predicted peptide transcript=Glyma.04g072300.1 locus=Glyma.04g072300 id=Glyma.04g072300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVFPSSSLSLPLSFFPIPTLLPNNLIFRNNNWTILNQRKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAVSSFRLLSPTENYVPPYKDPWRFW*

>Glyma.04g072300.4.p sequence-type=predicted peptide transcript=Glyma.04g072300.4 locus=Glyma.04g072300 id=Glyma.04g072300.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVFPSSSLSLPLSFFPIPTLLPNNLIFRNNNWTILNQRKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGYLYSISASTVSPRWEKLGPFLDKAA*

>Glyma.04g072300.6.p sequence-type=predicted peptide transcript=Glyma.04g072300.6 locus=Glyma.04g072300 id=Glyma.04g072300.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVFPSSSLSLPLSFFPIPTLLPNNLIFRNNNWTILNQRKCPLSEERPRFSCCALKPTSQNRIFRRDLMLLGLTSLSLPMPLSVTLAEEEPKMASFLDEINAYSYMYPVELPSDNFSFKWIESRKPERYSSAAPLSPDARLRIVSERVDFIDNVIISVTIGPPNSSYIKSKDKSEWTAKDVADSVLADRSSLRVTSSQRLEESSVLNTHSSEIDGEMYWYYEYLVRKAPLRLTDESSTYRHYLASTAERDGIFSICFFIGIDYFYLCTSNMRLSAY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo