SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g054400

Feature Type:gene_model
Chromosome:Gm04
Start:4408158
stop:4408876
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g054400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G12020.1AT HSP17.6II JGI N/AIEA
K13993KEGG Chaperones and folding catalysts JGI N/AIEA
PTHR11527PantherFam HEAT-SHOCK PROTEIN 20 FAMILY MEMBER JGI N/AIEA
PF00011Pfam Hsp20/alpha crystallin family JGI N/AIEA

Gene model name correspondences to Glyma.04g054400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g05720 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g054400
>Glyma.04g054400.1 sequence-type=CDS polypeptide=Glyma.04g054400.1.p locus=Glyma.04g054400 id=Glyma.04g054400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATATCAGGTTGATGGATTTGGACTCTCCATTGTTCAACACTCTGCACCGAATCATGGATCTGACAGAGGACGCAGAGAAGAACTTGAACGCTCCGACGCGGACATACGTGCGCGACGCGAAGGCAATGGCTGCGACTCCTGCGGACGTGAAGGAGTACCCTAACTACTACGTGTTCGTGATCGACATGCCAGGCCTGAAATCCGGGGACATTAAGGTGCAGGTGGAGGATGATAACGTGCTTCTGATAAGCGGCGAGAGGAAGAGGGAGGAGGATAAAGAGAAAGAAGGGGCTAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGAGGAAGTTCACGCTTCCCGAGAATGCCAACACCGATGCTATCTCTGCCGTCTGCCAAGACGGTGTGCTCACTGTCACTGTCAACAAGCTGCCTCCTCCTCAGCCCAAAAAGCCCAAGACCATAGAGGTTAAGATCGCCTGA
Predicted protein sequences of Glyma.04g054400
>Glyma.04g054400.1.p sequence-type=predicted peptide transcript=Glyma.04g054400.1 locus=Glyma.04g054400 id=Glyma.04g054400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDIRLMDLDSPLFNTLHRIMDLTEDAEKNLNAPTRTYVRDAKAMAATPADVKEYPNYYVFVIDMPGLKSGDIKVQVEDDNVLLISGERKREEDKEKEGAKYLRMERRVGKFMRKFTLPENANTDAISAVCQDGVLTVTVNKLPPPQPKKPKTIEVKIA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo