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Report for Sequence Feature Glyma.04g054000

Feature Type:gene_model
Chromosome:Gm04
Start:4375156
stop:4378289
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g054000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G21320.1AT JGI N/AIEA
GO:0000398GO-bp mRNA splicing, via spliceosome JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0017069GO-mf snRNA binding JGI N/AIEA
PTHR10501PantherFam U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.04g054000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g05680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g054000
>Glyma.04g054000.1 sequence-type=CDS polypeptide=Glyma.04g054000.1.p locus=Glyma.04g054000 id=Glyma.04g054000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGACCCCTACTACTCATACGGTGCTCCGGTAGGCGCTGACGGAGCTAGCATTGCAAGGAGCAGCTTTGCTGGTTATATCCCCTCTGAGCCTTCAAATTCCACTGAATTGAGGGGCATTGGATCAGATTACCTGCAGAGAGATATAGGCTTGTTTTACAGTGCTGATGATACCTTGGGCTCCAGAGTTCATTCTGAGCCTGTTAAGGGTTATTCGCCTCTTGCAGATCCTTGTCTGAGTAAAAAACGAGATACAACACCATTGGGCATTAATAATGGTGTTCCTGATGTAAGCAGTGAAAGACCAGCTTCTAAAAGCAGTTATGACGGTCTACCAATTTCGGCGGCAGACTCAAACATTCTGTTTGTGGGTGGACTTCCAAAAGACTGCACTAGAAGGGAAGTTGGGCATCTTTTCCGTCCCTTTATTGGCTATAAGGATATCAGAGTTGTTCACAAGGAGCCTAGACGTAGTGGAGACAAAGCTATGACTTTGTGTTTTGTGGAGTTTGTTGACTCCAATTGTGCTCTCACTGCCCTGGAAACCCTGCAAGGCTACAAGTTTGATGATAAAAAGCCTGACTCACCAACTTTAAAAATACAGCCTGCACACTTTCCTTTCCGGCTACCATCTGATCATGGCAACAGCTTATCAACATGA
Predicted protein sequences of Glyma.04g054000
>Glyma.04g054000.1.p sequence-type=predicted peptide transcript=Glyma.04g054000.1 locus=Glyma.04g054000 id=Glyma.04g054000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADPYYSYGAPVGADGASIARSSFAGYIPSEPSNSTELRGIGSDYLQRDIGLFYSADDTLGSRVHSEPVKGYSPLADPCLSKKRDTTPLGINNGVPDVSSERPASKSSYDGLPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALTALETLQGYKFDDKKPDSPTLKIQPAHFPFRLPSDHGNSLST*






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