SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g053700

Feature Type:gene_model
Chromosome:Gm04
Start:4347820
stop:4351659
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g053700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G01790.1AT JGI N/AIEA
3.1.26.5EC ribonuclease P JGI N/AIEA
KOG3387 KOG 60S ribosomal protein 15.5kD/SNU13, NHP2/L7A family (includes ribonuclease P subunit p38), involved in splicing JGI N/AIEA
PTHR21596PantherFam RIBONUCLEASE P SUBUNIT P38 JGI N/AIEA
PF01248Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JGI N/AIEA

Gene model name correspondences to Glyma.04g053700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g05650 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g053700
>Glyma.04g053700.2 sequence-type=CDS polypeptide=Glyma.04g053700.2.p locus=Glyma.04g053700 id=Glyma.04g053700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGAGTAGGAATAGTGCCAAAACTCCAAAGAATGATGGAAACAACTCAAATTCCAGTCTTGCTTCTCTAGAAAATAATTGCTATGAAGGAGAACGTCTCACCAGTCTGCTCCAATCAATCCGTAGGGGGATCCAATCTGCTAGACATTTGGATGGAAGTTCCTTGCCAGAGAAGATATGGTTAAAGCAACAATTTTCTATTGGGGTCAACGATGTAACTCGTGTCCTTGAGCGCATGAAACCATGCACGGAGTTAGAAAGCTCTACTGAACTCATCTCTTTGAGAAGCAACCATACAGCATCTTCAGTTAAGCTTCAGGCTGTGCTTGTAGCTTCTGACTGTAACCCACGTTGGCTGACGAAACATCTCCTAAGTTTGGCTTCATCAAGGAATGTGCCCCTGGTATTTGTTAGAGATACTAAACAAGGTTCTTTGAGACTAGGTGAACTTGTGCAATTAAAAACGGCCATTGCTATCGGAATTAAGGTTAAAGGAAGCACCATAAATAAAATTATTCAGCAAGTTATTCAAGGCGATAGATTTGAACTTTCACCTGAAGGGCAAAATTCAGCAAGAATATTTGATGCGCAAAGTAACTTTCAGGACCCTGACAAAAAAATGCTATCAAATGTAATTTAA
Predicted protein sequences of Glyma.04g053700
>Glyma.04g053700.2.p sequence-type=predicted peptide transcript=Glyma.04g053700.2 locus=Glyma.04g053700 id=Glyma.04g053700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPSRNSAKTPKNDGNNSNSSLASLENNCYEGERLTSLLQSIRRGIQSARHLDGSSLPEKIWLKQQFSIGVNDVTRVLERMKPCTELESSTELISLRSNHTASSVKLQAVLVASDCNPRWLTKHLLSLASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQGDRFELSPEGQNSARIFDAQSNFQDPDKKMLSNVI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo