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Report for Sequence Feature Glyma.04g052700

Feature Type:gene_model
Chromosome:Gm04
Start:4263312
stop:4267854
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G11960.1AT JGI N/AIEA
GO:0015693GO-bp magnesium ion transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0015095GO-mf magnesium ion transmembrane transporter activity JGI N/AIEA
KOG2922 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR12570PantherFam UNCHARACTERIZED JGI N/AIEA
PF05653Pfam Magnesium transporter NIPA JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma04g05560 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.04g052700.1 sequence-type=CDS polypeptide=Glyma.04g052700.1.p locus=Glyma.04g052700 id=Glyma.04g052700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGGGAATCAATTGTTTTGACGGTGGTTGCCACCGCCGGCAACAACATCGGCAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCCCCTCTCTCTTTCAAGCTCAAGGTCATAAGGGCATATGCTTTGAACAAAACCTGGGTGATAGGTTTTCTAATGGATATATTTGGGGCACTGTTGATGTTAAGGGCATTAGCTCTTGCGCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTCTCAGTCTTTTCTCATTTTTATCTCAAAGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGAGGCTGCTGCTCTATCTATTTTCCACATACCATGGCTGGCATTTGTTGTTTTCATCTTGTTTATAATGCTTAATGGATGGCTTCGTATATTCAAACGTAATCGAAGAGAACAAGAGATGATGGAATATGATGTTGTTGAGGAAATTATTTACGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTTCTGTTCTTGGAGCAAGGCTTCCCCAAGCTGTTGGTTCCTATTTGCATCATCATAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACATGGGAGGGCTATTGTAGTTTCTACATGTGCCGCAGTGGCATCTATTTTGACTGGTGTACTTGCTGGGATGCTTGCTTTGGGTGAGCGACTCCCTTCGGCCCCAAAAGCTCGCTTTTTACTTCTTCTTGGATGGCTACTTATTATTGTTGGCGTGATTTTACTTGTTGGTTCAACAAAGCTAGTGAGATTCTTTCGATTTTCTTCACACCACTTTAAAAGAAGCAGCGTTGATAAGAATTATGGCCCTAGAAGATCTGGAACTTCCCGTGTTAGGGAACCTAGCCCAACTGCTGTCATTCAAGCGGCTACCTTAAATCATTTACTCTCATCATCTTCCAAAGAAAAAGCTTGA

>Glyma.04g052700.2 sequence-type=CDS polypeptide=Glyma.04g052700.2.p locus=Glyma.04g052700 id=Glyma.04g052700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACGAGGGATTTTGGGTGGAGGAAAATTGGGTCATAAGGGCATATGCTTTGAACAAAACCTGGGTGATAGGTTTTCTAATGGATATATTTGGGGCACTGTTGATGTTAAGGGCATTAGCTCTTGCGCCTGTCTCTGTCATCCAACCAGTTTCTGGCTGTGGACTGGCAATTCTCTCAGTCTTTTCTCATTTTTATCTCAAAGAAGTCATGAATGTTGTTGATTGGGTGGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGAGGCTGCTGCTCTATCTATTTTCCACATACCATGGCTGGCATTTGTTGTTTTCATCTTGTTTATAATGCTTAATGGATGGCTTCGTATATTCAAACGTAATCGAAGAGAACAAGAGATGATGGAATATGATGTTGTTGAGGAAATTATTTACGGCTTGGAATCTGGAATTTTGTTTGGGATGGCATCTGTAATATCAAAGATGGGGTTTCTGTTCTTGGAGCAAGGCTTCCCCAAGCTGTTGGTTCCTATTTGCATCATCATAAGTGTCTGTTCAAGTGGTACAGGCTTTTACTACCAGACACGTGGTCTAAAACATGGGAGGGCTATTGTAGTTTCTACATGTGCCGCAGTGGCATCTATTTTGACTGGTGTACTTGCTGGGATGCTTGCTTTGGGTGAGCGACTCCCTTCGGCCCCAAAAGCTCGCTTTTTACTTCTTCTTGGATGGCTACTTATTATTGTTGGCGTGATTTTACTTGTTGGTTCAACAAAGCTAGTGAGATTCTTTCGATTTTCTTCACACCACTTTAAAAGAAGCAGCGTTGATAAGAATTATGGCCCTAGAAGATCTGGAACTTCCCGTGTTAGGGAACCTAGCCCAACTGCTGTCATTCAAGCGGCTACCTTAAATCATTTACTCTCATCATCTTCCAAAGAAAAAGCTTGA

>Glyma.04g052700.1.p sequence-type=predicted peptide transcript=Glyma.04g052700.1 locus=Glyma.04g052700 id=Glyma.04g052700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MWESIVLTVVATAGNNIGKILQKKGTVILPPLSFKLKVIRAYALNKTWVIGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITLAGFGTIGVGAGGEEQEAAALSIFHIPWLAFVVFILFIMLNGWLRIFKRNRREQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIIISVCSSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPKARFLLLLGWLLIIVGVILLVGSTKLVRFFRFSSHHFKRSSVDKNYGPRRSGTSRVREPSPTAVIQAATLNHLLSSSSKEKA*

>Glyma.04g052700.2.p sequence-type=predicted peptide transcript=Glyma.04g052700.2 locus=Glyma.04g052700 id=Glyma.04g052700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNEGFWVEENWVIRAYALNKTWVIGFLMDIFGALLMLRALALAPVSVIQPVSGCGLAILSVFSHFYLKEVMNVVDWVGITLAGFGTIGVGAGGEEQEAAALSIFHIPWLAFVVFILFIMLNGWLRIFKRNRREQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLLVPICIIISVCSSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPKARFLLLLGWLLIIVGVILLVGSTKLVRFFRFSSHHFKRSSVDKNYGPRRSGTSRVREPSPTAVIQAATLNHLLSSSSKEKA*







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