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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT4G08150.1 | AT | KNOTTED-like from Arabidopsis thaliana | JGI | N/A | IEA |
GO:0001708 | GO-bp | cell fate specification | EnsemblGenomes | N/A | IEA |
GO:0006355 | GO-bp | regulation of transcription, DNA-templated | EnsemblGenomes | N/A | IEA |
GO:0006355 | GO-bp | regulation of transcription, DNA-templated | JGI | N/A | IEA |
GO:0010051 | GO-bp | xylem and phloem pattern formation | EnsemblGenomes | N/A | IEA |
GO:0010089 | GO-bp | xylem development | EnsemblGenomes | N/A | IEA |
GO:0045165 | GO-bp | cell fate commitment | EnsemblGenomes | N/A | IEA |
GO:0005634 | GO-cc | nucleus | EnsemblGenomes | N/A | IEA |
GO:0005634 | GO-cc | nucleus | JGI | N/A | IEA |
GO:0003677 | GO-mf | DNA binding | EnsemblGenomes | N/A | IEA |
GO:0003677 | GO-mf | DNA binding | JGI | N/A | IEA |
GO:0003700 | GO-mf | sequence-specific DNA binding transcription factor activity | JGI | N/A | IEA |
GO:0043565 | GO-mf | sequence-specific DNA binding | EnsemblGenomes | N/A | IEA |
GO:0043565 | GO-mf | sequence-specific DNA binding | JGI | N/A | IEA |
KOG0773 | KOG | Transcription factor MEIS1 and related HOX domain proteins | JGI | N/A | IEA |
PTHR11850 | Panther | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | JGI | N/A | IEA |
PTHR11850:SF50 | Panther | PRE-B-CELL LEUKEMIA TRANSCRIPTION FACTOR 2 | JGI | N/A | IEA |
PF00046 | PFAM | Homeobox domain | JGI | N/A | IEA |
PF03789 | PFAM | ELK domain | JGI | N/A | IEA |
PF03790 | PFAM | KNOX1 domain | JGI | N/A | IEA |
PF03791 | PFAM | KNOX2 domain | JGI | N/A | IEA |
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Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma04g05210 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.04g049500.2 sequence-type=transcript locus=Glyma.04g049500 ID=Glyma.04g049500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 AAAATGAAAGAGGCTTTTGTCAACTGCGTCCTAGACACAGTGCCATTGCCGGATTTAATTGCACCACTCCTCTCTCTCTCTCTCACCTCCTATACAACTAATCTTGTAAGATTTTCTCTCTCTCTACCCTGTCTTTGCCCAAAATTTGGTGGTGCAAATCATCACACTTACTTTTCCATTAAAATCCTCCCAAAAACCGTATACCCTTTCCACTTGGATACCTTAGATTTCAACATAAATTGAATCTGACTTACGCAGTTGATGGTGTGGTCCATATCATAAGATTTTTTCATCACCAATCTCTTACTCTTTTAGGGTTTTAAGCTGTACACCTCATCAATTAAGTAGGGTTTGTGGCCATCGCTTCTTCTTGATATTGAGAAGTTGTACATAGTTGTACCTATTGGTTGAAGTTCTAGTTCAGCTGGGTCATATAGCTGATTAATTAAGTTCTTAATGTTTTTTTTTAATTGAATAAATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGATGATAAGTGGGAAAACATTGGTTCATCATCGGAAGAGGATAAAGACAACAGTGGTCGAGAAACAGAATTGATCGAGATTGATCCCCAAGCGGAAGACCGTGAACTCAAAAGCCACTTGCTCAAGAAGTACAGTGGCTACTTAGGTACCCTTAAGAAAGAACTTTCTAAGAAAAAGAAAAAAGGAAAACTGCCTAAAGATGCTAGGCAAAAGCTACTTAGCTGGTGGGAATTACATTACAAATGGCCATATCCTTCGATCTTCTGAATAAATTGTTCCGCGATTAACCTTAGGAATCAGAGAAGGTGGCGCTGGCTGAAGCAACTGGTTTGGATCAGAAGCAAATAAATAACTGGTTCATAAATCAAAGGAAACGGCACTGGAAACCATCGGAAGACATGCAATTTATGGTTATGGATGGCTTGCATGCGCAGAATGCAACTCTCTATATGGATGGCCACTACATGGCTAATGACCATTACCGTTTATGGCCATAACCGCCCAATATTATTGTTGACGGTTTGAAACAAATTTTATAAGTTGTTGCTATTTTTTAGgaccattattatattttttttagtttatcttctaggcaactatccc >Glyma.04g049500.3 sequence-type=transcript locus=Glyma.04g049500 ID=Glyma.04g049500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 AAAATGAAAGAGGCTTTTGTCAACTGCGTCCTAGACACAGTGCCATTGCCGGATTTAATTGCACCACTCCTCTCTCTCTCTCTCACCTCCTATACAACTAATCTTGTAAGATTTTCTCTCTCTCTACCCTGTCTTTGCCCAAAATTTGGTGGTGCAAATCATCACACTTACTTTTCCATTAAAATCCTCCCAAAAACCGTATACCCTTTCCACTTGGATACCTTAGATTTCAACATAAATTGAATCTGACTTACGCAGTTGATGGTGTGGTCCATATCATAAGATTTTTTCATCACCAATCTCTTACTCTTTTAGGGTTTTAAGCTGTACACCTCATCAATTAAGTAGGGTTTGTGGCCATCGCTTCTTCTTGATATTGAGAAGTTGTACATAGTTGTACCTATTGGTTGAAGTTCTAGTTCAGCTGGGTCATATAGCTGATTAATTAAGTTCTTAATGTTTTTTTTTAATTGAATAAATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGATGTCAACTCCATCCATCACGTGACAGAGGATCTCGTCTGCCAAACACAAGCATATGGTTGCCACAATCCTCTCTTGCAACTCATCTCTCAATCCAAAGCCTCCATCTTATCAAGTTCTAAGTCGTGTAAGGCCTTCAAAAGACCTTGCTATACAACATATCCTTAACTCACCTATGCCACCACAATCCAAAATCTCCAGTTCCATCGAACTTTCCTACTTCGAATTTGATCCTGGAGTTAAGCATCATTTATACTAGTTGTTAATAATAACAATCAGAATTCTAAAGAGATGAGAGGACATAGGCACAGAGTTTGTCAGATAGTTAGAATAAGTGGAATGAGATATTTTTCAATATATATATTTTTTATAAGAAAAAACAAAATTTTATTAATGAACCTGCCTAAACAC >Glyma.04g049500.4 sequence-type=transcript locus=Glyma.04g049500 ID=Glyma.04g049500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1 AAAATGAAAGAGGCTTTTGTCAACTGCGTCCTAGACACAGTGCCATTGCCGGATTTAATTGCACCACTCCTCTCTCTCTCTCTCACCTCCTATACAACTAATCTTGTAAGATTTTCTCTCTCTCTACCCTGTCTTTGCCCAAAATTTGGTGGTGCAAATCATCACACTTACTTTTCCATTAAAATCCTCCCAAAAACCGTATACCCTTTCCACTTGGATACCTTAGATTTCAACATAAATTGAATCTGACTTACGCAGTTGATGGTGTGGTCCATATCATAAGATTTTTTCATCACCAATCTCTTACTCTTTTAGGGTTTTAAGCTGTACACCTCATCAATTAAGTAGGGTTTGTGGCCATCGCTTCTTCTTGATATTGAGAAGTTGTACATAGTTGTACCTATTGGTTGAAGTTCTAGTTCAGCTGGGTCATATAGCTGATTAATTAAGTTCTTAATGTTTTTTTTTAATTGAATAAATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGGTATTTTATCTTTCTATTTGTGGGAGTAGTGGAGGACACTGTTCCACTGTACTTTCGTTGCCTATATCTTTCAATTTCTGCAACACAAATTTTCATTATTTAAACTAAATAATTATAAAATATACAATAATCAGCTATATAT
>Glyma.04g049500.1 sequence-type=CDS polypeptide=Glyma.04g049500.1.p locus=Glyma.04g049500 ID=Glyma.04g049500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGATGATAAGTGGGAAAACATTGGTTCATCATCGGAAGAGGATAAAGACAACAGTGGTCGAGAAACAGAATTGATCGAGATTGATCCCCAAGCGGAAGACCGTGAACTCAAAAGCCACTTGCTCAAGAAGTACAGTGGCTACTTAGGTACCCTTAAGAAAGAACTTTCTAAGAAAAAGAAAAAAGGAAAACTGCCTAAAGATGCTAGGCAAAAGCTACTTAGCTGGTGGGAATTACATTACAAATGGCCATATCCTTCGGAATCAGAGAAGGTGGCGCTGGCTGAAGCAACTGGTTTGGATCAGAAGCAAATAAATAACTGGTTCATAAATCAAAGGAAACGGCACTGGAAACCATCGGAAGACATGCAATTTATGGTTATGGATGGCTTGCATGCGCAGAATGCAACTCTCTATATGGATGGCCACTACATGGCTAATGACCATTACCGTTTATGGCCATAA >Glyma.04g049500.2 sequence-type=CDS polypeptide=Glyma.04g049500.2.p locus=Glyma.04g049500 ID=Glyma.04g049500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGATGATAAGTGGGAAAACATTGGTTCATCATCGGAAGAGGATAAAGACAACAGTGGTCGAGAAACAGAATTGATCGAGATTGATCCCCAAGCGGAAGACCGTGAACTCAAAAGCCACTTGCTCAAGAAGTACAGTGGCTACTTAGGTACCCTTAAGAAAGAACTTTCTAAGAAAAAGAAAAAAGGAAAACTGCCTAAAGATGCTAGGCAAAAGCTACTTAGCTGGTGGGAATTACATTACAAATGGCCATATCCTTCGATCTTCTGA >Glyma.04g049500.3 sequence-type=CDS polypeptide=Glyma.04g049500.3.p locus=Glyma.04g049500 ID=Glyma.04g049500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGATGTCAACTCCATCCATCACGTGACAGAGGATCTCGTCTGCCAAACACAAGCATATGGTTGCCACAATCCTCTCTTGCAACTCATCTCTCAATCCAAAGCCTCCATCTTATCAAGTTCTAAGTCGTGTAAGGCCTTCAAAAGACCTTGCTATACAACATATCCTTAA >Glyma.04g049500.4 sequence-type=CDS polypeptide=Glyma.04g049500.4.p locus=Glyma.04g049500 ID=Glyma.04g049500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAGGAATACACCAATAATCACCTGAGCCAAAACACAAGTCCAAGGGCAAATTTGTTGTATTCTTTGGCTGGTGGTTCAAGCGTAGGAAACCGCCACCACCAACTAATTCCATTTAACACCTTTCATCTTCAAACGGGTAGATCGGATCACTGTTTTCAACCGGATCAAGCACCACACCCTAGTGTGAAAACCGAGTCCAACAATTCCCATCTTCACTATCCTCTAATGAGATCAAATCTTCACCACATGCTGCATCCTCAGCAAGGAGGGAGCCAGAGCTCTAACGAACTTGAAGCCATAAAAGCCAAAATCATTGACCATCCTCACTACTCAAATCTTTTACAAGTTTACATGGATTGCCAAAAGGTAGGAGCTCCGCCAGAAGTGGCGGCGCGTTTTGCTACGGTTAAAGAGAATTTTGAGGCACGGCAGCGATCTTTGGTTAGGTCAATGGAAACTTGCAAGGACCCAGAACTTGATCAATTCATGGAAGCTTACTATGACATGCTAGTGAAGTATCGAGAGGAATTAACGAGGCCTATAGAAGAGGCTAAGGATTTCATGCAGAGGATAGAATCTCAGCTGAACACGCTTTGCAATGGAACCGTGCGGATCTTCTCTGGTATTTTATCTTTCTATTTGTGGGAGTAG
>Glyma.04g049500.1.p sequence-type=predicted peptide transcript=Glyma.04g049500.1 locus=Glyma.04g049500 ID=Glyma.04g049500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEEYTNNHLSQNTSPRANLLYSLAGGSSVGNRHHQLIPFNTFHLQTGRSDHCFQPDQAPHPSVKTESNNSHLHYPLMRSNLHHMLHPQQGGSQSSNELEAIKAKIIDHPHYSNLLQVYMDCQKVGAPPEVAARFATVKENFEARQRSLVRSMETCKDPELDQFMEAYYDMLVKYREELTRPIEEAKDFMQRIESQLNTLCNGTVRIFSDDKWENIGSSSEEDKDNSGRETELIEIDPQAEDRELKSHLLKKYSGYLGTLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVALAEATGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLHAQNATLYMDGHYMANDHYRLWP* >Glyma.04g049500.2.p sequence-type=predicted peptide transcript=Glyma.04g049500.2 locus=Glyma.04g049500 ID=Glyma.04g049500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEEYTNNHLSQNTSPRANLLYSLAGGSSVGNRHHQLIPFNTFHLQTGRSDHCFQPDQAPHPSVKTESNNSHLHYPLMRSNLHHMLHPQQGGSQSSNELEAIKAKIIDHPHYSNLLQVYMDCQKVGAPPEVAARFATVKENFEARQRSLVRSMETCKDPELDQFMEAYYDMLVKYREELTRPIEEAKDFMQRIESQLNTLCNGTVRIFSDDKWENIGSSSEEDKDNSGRETELIEIDPQAEDRELKSHLLKKYSGYLGTLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSIF* >Glyma.04g049500.3.p sequence-type=predicted peptide transcript=Glyma.04g049500.3 locus=Glyma.04g049500 ID=Glyma.04g049500.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEEYTNNHLSQNTSPRANLLYSLAGGSSVGNRHHQLIPFNTFHLQTGRSDHCFQPDQAPHPSVKTESNNSHLHYPLMRSNLHHMLHPQQGGSQSSNELEAIKAKIIDHPHYSNLLQVYMDCQKVGAPPEVAARFATVKENFEARQRSLVRSMETCKDPELDQFMEAYYDMLVKYREELTRPIEEAKDFMQRIESQLNTLCNGTVRIFSDVNSIHHVTEDLVCQTQAYGCHNPLLQLISQSKASILSSSKSCKAFKRPCYTTYP* >Glyma.04g049500.4.p sequence-type=predicted peptide transcript=Glyma.04g049500.4 locus=Glyma.04g049500 ID=Glyma.04g049500.4.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEEYTNNHLSQNTSPRANLLYSLAGGSSVGNRHHQLIPFNTFHLQTGRSDHCFQPDQAPHPSVKTESNNSHLHYPLMRSNLHHMLHPQQGGSQSSNELEAIKAKIIDHPHYSNLLQVYMDCQKVGAPPEVAARFATVKENFEARQRSLVRSMETCKDPELDQFMEAYYDMLVKYREELTRPIEEAKDFMQRIESQLNTLCNGTVRIFSGILSFYLWE*
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