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Report for Sequence Feature Glyma.04g048500

Feature Type:gene_model
Chromosome:Gm04
Start:3910077
stop:3911721
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g048500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G22830.1AT SQE2 JGI N/AIEA
1.14.13.132EC JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0004506GO-mf squalene monooxygenase activity JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
PTHR10835PantherFam SQUALENE MONOOXYGENASE JGI N/AIEA
PF08491Pfam Squalene epoxidase JGI N/AIEA

Gene model name correspondences to Glyma.04g048500 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g05131 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g048500
>Glyma.04g048500.3 sequence-type=CDS polypeptide=Glyma.04g048500.3.p locus=Glyma.04g048500 id=Glyma.04g048500.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGTGCGACTGGAGCAGGAACAGCTACTTCCCTAATTGAAGAGAAGGGGATAATTAAAGGCATGCGCTACAAAACGAAGGATAATAAGGAATTTTCAGCTTGTGCACCCCTTACCATTGTCTGTGATGGCAGTTCCTCAAATTTGCGTCGTTCTCTGTGTAATCCTAAGGCTTCTTGCTGGCATTTTATAATGCTTTGTTTTCAGGTAGACGTTCCCTCTCGTTTTGTTGGCTTAGTTTTGGAGAATTGTCCTTGTGCAAATCATAGCCATCTCATATTGGGAGATCCTTCGCCAGTTGTGTTCTATCCTATAAGTAGTTCAGAAGTCCGTTGTCTTGTTGATGTTCCTGGTCAGAAAGTTCCATCCATTTCCAATGGTGAAATGGCAAAGTATTTGAAGACAGTGATAGCTCCACAGATTCCTCTTGAGCTTCATGACGCTTTCATAGCCGCAGTGGACAAAGGCAACATAAGGACAATGCGAAACAGAAGCAAGCCAGCAGCTTCTTATCCTACTCCTGGAGCCCAGCTGATGGGAGATGCATTCAACATGGGGTGGAATGACCGTGGCATTATCTGA
Predicted protein sequences of Glyma.04g048500
>Glyma.04g048500.3.p sequence-type=predicted peptide transcript=Glyma.04g048500.3 locus=Glyma.04g048500 id=Glyma.04g048500.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MCATGAGTATSLIEEKGIIKGMRYKTKDNKEFSACAPLTIVCDGSSSNLRRSLCNPKASCWHFIMLCFQVDVPSRFVGLVLENCPCANHSHLILGDPSPVVFYPISSSEVRCLVDVPGQKVPSISNGEMAKYLKTVIAPQIPLELHDAFIAAVDKGNIRTMRNRSKPAASYPTPGAQLMGDAFNMGWNDRGII*






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