SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g048300

Feature Type:gene_model
Chromosome:Gm04
Start:3897602
stop:3899291
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g048300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G58440.1AT SQE1,XF1 JGI N/AIEA
1.14.99.7EC JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0004506GO-mf squalene monooxygenase activity JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
PTHR10835PantherFam SQUALENE MONOOXYGENASE JGI N/AIEA
PF08491Pfam Squalene epoxidase JGI N/AIEA

Gene model name correspondences to Glyma.04g048300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.04g048300
>Glyma.04g048300.1 sequence-type=CDS polypeptide=Glyma.04g048300.1.p locus=Glyma.04g048300 id=Glyma.04g048300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACTGTAGCATTATCCGATATAGTAGTGTTGCGAAATCTTCTCAGACCTTTGCGTGACCTGAACGATGCACCCAGCCTTTGCAAATACCTAGAATCCTTTTATACCTTGTGCAAGCCTGTGGCATCCACAATAAATACGTTGGCAAGAGCCCTTTACAAGGTTTTTTGCGCATCACTTGACCCAGCAAGGAAGGAAATGCGCCAAGCTTGCTTCGATTATCTTAGTCTTGGAGGTCTATTCTCCGAAGGGCAAGTCTCTTTGCTTTCAGGATTAAACCCTCGGCCCTTGAGCCTGGTTCTCCATTTCTTTGCTGTTGCAATATACAGTGTTGGCCGTTTACTGCTCCCATTTCCTTCACCTAAACGGATGTGGATTGGAGTTCGATTAATTTCTAGTGCATCTGGAATCATCTTGCCAATAATTAAGGCAGAAGGAGTCCGTCAGATGTTCTTCACTGCAACTGTACCAACTTACTACAGAATCCCCCCGGCGGATGCATAA
Predicted protein sequences of Glyma.04g048300
>Glyma.04g048300.1.p sequence-type=predicted peptide transcript=Glyma.04g048300.1 locus=Glyma.04g048300 id=Glyma.04g048300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTVALSDIVVLRNLLRPLRDLNDAPSLCKYLESFYTLCKPVASTINTLARALYKVFCASLDPARKEMRQACFDYLSLGGLFSEGQVSLLSGLNPRPLSLVLHFFAVAIYSVGRLLLPFPSPKRMWIGVRLISSASGIILPIIKAEGVRQMFFTATVPTYYRIPPADA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo