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Report for Sequence Feature Glyma.04g045600

Feature Type:gene_model
Chromosome:Gm04
Start:3636794
stop:3641871
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G27760.3AT ATSAT32,SAT32 JGI N/AIEA
KOG2842 KOG Interferon-related protein PC4 like JGI N/AIEA
PTHR12354PantherFam INTERFERON-RELATED DEVELOPMENTAL REGULATOR JGI N/AIEA
PTHR12354:SF1PantherFam LP04564P JGI N/AIEA
PF04836Pfam Interferon-related protein conserved region JGI N/AIEA
PF05004Pfam Interferon-related developmental regulator (IFRD) JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma04g04830 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.04g045600.1 sequence-type=CDS polypeptide=Glyma.04g045600.1.p locus=Glyma.04g045600 id=Glyma.04g045600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGAAAACGTAATTCTCAACGCAAAAGTGCTGCGATGTTCGATAGCGATGACGATAGTAGCGTGACTTCGTCGTCAACTGCTCTTTCTGATTTGATGTCGGTGTCTGGGGCTGAAGATGTTCAATTTGTTCAAGATTCCTTTCTCGACCAAGCTCTCGATGCATTAGATGAGAAAAGGGGTTCCACGAGGGAGAAAGCTTTGTCATCGATCATTGACGCTTTCAATAGCAACATGCAGCATGAGTTTGTGGAGAAGAAATTTGCTACCTTACTACATCAATGTCTTGCTTCAATAAAAAAGGGATCTAAAAAGGCATCTGCTAAGGAGATAGCTTTGGCATCTCATGCCATTGGTTGTTTGGCCTTGACTGTTGGATGCGGTGACAATGCCCGCGAGATATTTGAGGAATCCATTCGTCCTTTGGATGAATCTCTCACATCTAGGATAGATGTTTCAAAGACACCATCATTACTGGAGTGTTTGGCTATAATCACTTTTGTTGGAGGGAACGATCAAGAAGAAACAGAACGATCAATGGACATGATGTGGCGAGTGATTAATCCCAAATTAGGTTCCAATGTAGTTGCTGTCAAACCTTCTGCTTCATTAATTGCCAATGTGGTGTCTGCGTGGTCCTTCCTCCTCTCTACTGTGAGCAATTTGAAGCTAAATACAAAAAATTGGCAAAATTCAATATCCTATTTATCTAGTCTTCTAGACAAGGAAGATAGGTCTGTACGAATTGCTGCTGGTGAAGCACTGGCTCTAATTTTTGAAATTGGAGTTATAGATAAATTTTCTGCCAAGTCAGACAGTGCAAGTGATACAACGCAAGAAGGGAGTAAACCACTTGAAAGCTACATATTTTTACAAGGATTGAAAGGAAAGGTGATAAATCAATGCAAAAATCTTTCTATAGAGGCTGGTGGAAAAGGTTCTGCCAAGAAAGATCTTAATAGTCAGAGGAACTTGTTTCGAGATATCTTGGATTTTTTTGAGTATGGTTACTCCCCGGATATTTCAATGAAGATTGGTGGTGATTCCCTGCAGGCATCATCATGGTCTGAAATGATACAGTTGAATTTTATCAAGCATTTTCTTGGGGGAGGATTCATTAAGCATATGCAGGAAAATGAGTTCTTACATGAAGTCTTTGGTTTCTCACCGAAGAGAAAGTATCTTAATACCAACGAACACAGAATGTCTGGTGGTGAAAAGAGAATGTTTAAGTCTCCAAATTCGGTTTTGAACAAGGCTAGGACACAATCACTTAATAAGCAGCGGATATTATCTGAGGGCAGAAACTTCGGCCACTACGCTGTCGGTATGGTTGACGAGGAGGCATGA

>Glyma.04g045600.2 sequence-type=CDS polypeptide=Glyma.04g045600.2.p locus=Glyma.04g045600 id=Glyma.04g045600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTCGATAGCGATGACGATAGTAGCGTGACTTCGTCGTCAACTGCTCTTTCTGATTTGATGTCGGTGTCTGGGGCTGAAGATGTTCAATTTGTTCAAGATTCCTTTCTCGACCAAGCTCTCGATGCATTAGATGAGAAAAGGGGTTCCACGAGGGAGAAAGCTTTGTCATCGATCATTGACGCTTTCAATAGCAACATGCAGCATGAGTTTGTGGAGAAGAAATTTGCTACCTTACTACATCAATGTCTTGCTTCAATAAAAAAGGGATCTAAAAAGGCATCTGCTAAGGAGATAGCTTTGGCATCTCATGCCATTGGTTGTTTGGCCTTGACTGTTGGATGCGGTGACAATGCCCGCGAGATATTTGAGGAATCCATTCGTCCTTTGGATGAATCTCTCACATCTAGGATAGATGTTTCAAAGACACCATCATTACTGGAGTGTTTGGCTATAATCACTTTTGTTGGAGGGAACGATCAAGAAGAAACAGAACGATCAATGGACATGATGTGGCGAGTGATTAATCCCAAATTAGGTTCCAATGTAGTTGCTGTCAAACCTTCTGCTTCATTAATTGCCAATGTGGTGTCTGCGTGGTCCTTCCTCCTCTCTACTGTGAGCAATTTGAAGCTAAATACAAAAAATTGGCAAAATTCAATATCCTATTTATCTAGTCTTCTAGACAAGGAAGATAGGTCTGTACGAATTGCTGCTGGTGAAGCACTGGCTCTAATTTTTGAAATTGGAGTTATAGATAAATTTTCTGCCAAGTCAGACAGTGCAAGTGATACAACGCAAGAAGGGAGTAAACCACTTGAAAGCTACATATTTTTACAAGGATTGAAAGGAAAGGTGATAAATCAATGCAAAAATCTTTCTATAGAGGCTGGTGGAAAAGGTTCTGCCAAGAAAGATCTTAATAGTCAGAGGAACTTGTTTCGAGATATCTTGGATTTTTTTGAGTATGGTTACTCCCCGGATATTTCAATGAAGATTGGTGGTGATTCCCTGCAGGCATCATCATGGTCTGAAATGATACAGTTGAATTTTATCAAGCATTTTCTTGGGGGAGGATTCATTAAGCATATGCAGGAAAATGAGTTCTTACATGAAGTCTTTGGTTTCTCACCGAAGAGAAAGTATCTTAATACCAACGAACACAGAATGTCTGGTGGTGAAAAGAGAATGTTTAAGTCTCCAAATTCGGTTTTGAACAAGGCTAGGACACAATCACTTAATAAGCAGCGGATATTATCTGAGGGCAGAAACTTCGGCCACTACGCTGTCGGTATGGTTGACGAGGAGGCATGA

>Glyma.04g045600.1.p sequence-type=predicted peptide transcript=Glyma.04g045600.1 locus=Glyma.04g045600 id=Glyma.04g045600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGKRNSQRKSAAMFDSDDDSSVTSSSTALSDLMSVSGAEDVQFVQDSFLDQALDALDEKRGSTREKALSSIIDAFNSNMQHEFVEKKFATLLHQCLASIKKGSKKASAKEIALASHAIGCLALTVGCGDNAREIFEESIRPLDESLTSRIDVSKTPSLLECLAIITFVGGNDQEETERSMDMMWRVINPKLGSNVVAVKPSASLIANVVSAWSFLLSTVSNLKLNTKNWQNSISYLSSLLDKEDRSVRIAAGEALALIFEIGVIDKFSAKSDSASDTTQEGSKPLESYIFLQGLKGKVINQCKNLSIEAGGKGSAKKDLNSQRNLFRDILDFFEYGYSPDISMKIGGDSLQASSWSEMIQLNFIKHFLGGGFIKHMQENEFLHEVFGFSPKRKYLNTNEHRMSGGEKRMFKSPNSVLNKARTQSLNKQRILSEGRNFGHYAVGMVDEEA*

>Glyma.04g045600.2.p sequence-type=predicted peptide transcript=Glyma.04g045600.2 locus=Glyma.04g045600 id=Glyma.04g045600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MFDSDDDSSVTSSSTALSDLMSVSGAEDVQFVQDSFLDQALDALDEKRGSTREKALSSIIDAFNSNMQHEFVEKKFATLLHQCLASIKKGSKKASAKEIALASHAIGCLALTVGCGDNAREIFEESIRPLDESLTSRIDVSKTPSLLECLAIITFVGGNDQEETERSMDMMWRVINPKLGSNVVAVKPSASLIANVVSAWSFLLSTVSNLKLNTKNWQNSISYLSSLLDKEDRSVRIAAGEALALIFEIGVIDKFSAKSDSASDTTQEGSKPLESYIFLQGLKGKVINQCKNLSIEAGGKGSAKKDLNSQRNLFRDILDFFEYGYSPDISMKIGGDSLQASSWSEMIQLNFIKHFLGGGFIKHMQENEFLHEVFGFSPKRKYLNTNEHRMSGGEKRMFKSPNSVLNKARTQSLNKQRILSEGRNFGHYAVGMVDEEA*







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