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Report for Sequence Feature Glyma.04g040700

Feature Type:gene_model
Chromosome:Gm04
Start:3236041
stop:3240646
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g040700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G23350.1AT PAB4,PABP4 JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
K13126KEGG Spliceosome JGI N/AIEA
KOG0123 KOG Polyadenylate-binding protein (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00658Pfam Poly-adenylate binding protein, unique domain JGI N/AIEA

Gene model name correspondences to Glyma.04g040700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g04300 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g040700
>Glyma.04g040700.1 sequence-type=CDS polypeptide=Glyma.04g040700.1.p locus=Glyma.04g040700 id=Glyma.04g040700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCAAGTTCTTGAGAACCCCACCATTGACGCGGCGGCTTCCGGCGCGAACCCCTCGCTGACGACCATCTCGTTGTACGTCGGGGATCTTCACCACGACGTCAACGATCCGCAGCTGTATGATCTCTTCAACCAGGTTGCCCAAGTCGTTTCCGTTCGAATTTGCAGGGACGTGGCCACCCAACAATCCCTTGGTTACGGCTACGTCAATTTCAGCAACGCTCACGATGCCGCAAAAGCAATTGATGTGCTGAATTTCACTCCACTGAACGGCAAAATCATTAGGATAATGTACTCTATTCGGGACCCTAGTGCTCGGAAGAGTGGTGCAGCTAATGTTTTCATAAAGAATTTGGACAAGGCGATTGATCACAAGGCTTTGTACGATACATTTTCGGCTTTTGGGAATATTCTATCTTGCAAGGTTGCGACAGATGCTTCTGGCCAGTCTAAAGGCCATGGTTTTGTGCAGTTTGAGAGTGAAGAATCTGCACAAAATGCAATTGACAAGTTAAACGGCATGCTGATCAATGATAAGCAGGTCTTTGTGGGTCCTTTCCTGCGGAAGCAGGATAGAGAGAGTGCTCTCAGTGGCACAAAGTTTAATAACGTTTTCGTGAAAAACCTGTTGGATTCAATGACTGAGGCTGACTTGGAGAGAATTTTTGGAGAATATGGAGCTATTACTAGCGCTGTAGTGATGAGAGATGTAGATGGTAAATCAAAAGGTTTTGGTTTTGTCAATTTTGCAAATGTAGACGATGCTGCTAAAGCTGTGGAGGCTCTTAATGGAAAGAATTTTGATGGTAAGGAGTGGTATGTTGGAAAAGCCCAGAAAAAGTCTGAAAGGGAGCTTGAACTGAAAGGGCAACATGAACAGATTACAAAGGAGACTGTTGATAAATATCATGGTACAAACTTGTATATCAAGAACTTGGATGATAGTGTTGGTGATGAAGAACTCATGGAACTGTTCTCTGAGTTTGGTACGATAACCTCATGCAAGGTTATGCGAGATCCAAATGGAATTAGTAGAGGATCTGGATTTGTTTCATTTTCAATTGCTGAGGGAGCAACTCGGGCTCTTGGTGAGATGAATGGTAAAATGGTTGCTGGCAAACCTCTCTATGTTGCCCTTGCACAGAGAAAAGAAGATAGAAGAGCAAGGTTACAGGCACAATTTTCACAATCGAGGCCTGCTGCAATAACCCCTAATGTTTCACCTCGAATGCCTCTATACCCTCTAGGGGCTCCTGCGATAGGACAACAATTTTTGTATGGGCAAGCAGCTCCAGCCACGATACCTCAAGCTGCATTTGGTTACCAGCAGCATTTTGTTCCTGGAATGAGGCCAGGTGGTGCTCCAAACTTCTATGTTCCACTGGTTCAGCAGGGTCAACAGGGACAGCGCCCAGGAGGACACCGAGGATCAGGTCCTATGCAACAGCTCCAGCAGCCATTGCCATTGATGCACCAACAGATGCTTCCAAGGGGACATGTCTATCGATATCCTTCTGGCTCCAATATGCAAAATATTCAACTGGCAGGAGTACCTGGAGGAATGGTCACTTATGGCATTGGTCAACAAATGCCCACGCAGGCCCTGGCCTCGGCCCTTGCCAATGCTACTCCTGAACAGCAGAGGACTATGCTTGGTGAAGCTTTATACCCGTTAGTAGATAAGCTGGAGCATGAAGCAGCAGCAAAGGTTACTGGTATGCTCTTAGAGATGGATCAGCCTGAGGTATTACATCTGATTGAGTCACCGGATGCTCTCAAGGCTAAAGTTGTTGAGGCCATGGATGTGTTGAAGAAAGTTACACAGCAGCAATCAAACAGCCCAGCCGATCAACTGGCTTCACTCTCTCTGAATGATAATGTCGAGTCTTAA

>Glyma.04g040700.3 sequence-type=CDS polypeptide=Glyma.04g040700.3.p locus=Glyma.04g040700 id=Glyma.04g040700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCAAGTTCTTGAGAACCCCACCATTGACGCGGCGGCTTCCGGCGCGAACCCCTCGCTGACGACCATCTCGTTGTACGTCGGGGATCTTCACCACGACGTCAACGATCCGCAGCTGTATGATCTCTTCAACCAGGTTGCCCAAGTCGTTTCCGTTCGAATTTGCAGGGACGTGGCCACCCAACAATCCCTTGGTTACGGCTACGTCAATTTCAGCAACGCTCACGATGCCGCAAAAGCAATTGATGTGCTGAATTTCACTCCACTGAACGGCAAAATCATTAGGATAATGTACTCTATTCGGGACCCTAGTGCTCGGAAGAGTGGTGCAGCTAATGTTTTCATAAAGAATTTGGACAAGGCGATTGATCACAAGGCTTTGTACGATACATTTTCGGCTTTTGGGAATATTCTATCTTGCAAGGTTGCGACAGATGCTTCTGGCCAGTCTAAAGGCCATGGTTTTGTGCAGTTTGAGAGTGAAGAATCTGCACAAAATGCAATTGACAAGTTAAACGGCATGCTGATCAATGATAAGCAGGTCTTTGTGGGTCCTTTCCTGCGGAAGCAGGATAGAGAGAGTGCTCTCAGTGGCACAAAGTTTAATAACGTTTTCGTGAAAAACCTGTTGGATTCAATGACTGAGGCTGACTTGGAGAGAATTTTTGGAGAATATGGAGCTATTACTAGCGCTGTAGTGATGAGAGATGTAGATGGTAAATCAAAAGGTTTTGGTTTTGTCAATTTTGCAAATGTAGACGATGCTGCTAAAGCTGTGGAGGCTCTTAATGGAAAGAATTTTGATGGTAAGGAGTGGTATGTTGGAAAAGCCCAGAAAAAGTCTGAAAGGGAGCTTGAACTGAAAGGGCAACATGAACAGATTACAAAGGAGACTGTTGATAAATATCATGGTACAAACTTGTATATCAAGAACTTGGATGATAGTGTTGGTGATGAAGAACTCATGGAACTGTTCTCTGAGTTTGGTACGATAACCTCATGCAAGGTTATGCGAGATCCAAATGGAATTAGTAGAGGATCTGGATTTGTTTCATTTTCAATTGCTGAGGGAGCAACTCGGGCTCTTGGTGAGATGAATGGTAAAATGGTTGCTGGCAAACCTCTCTATGTTGCCCTTGCACAGAGAAAAGAAGATAGAAGAGCAAGGTTACAGGCACAATTTTCACAATCGAGGCCTGCTGCAATAACCCCTAATGTTTCACCTCGAATGCCTCTATACCCTCTAGGGGCTCCTGCGATAGGACAACAATTTTTGTATGGGCAAGCAGCTCCAGCCACGATACCTCAACAGCATTTTGTTCCTGGAATGAGGCCAGGTGGTGCTCCAAACTTCTATGTTCCACTGGTTCAGCAGGGTCAACAGGGACAGCGCCCAGGAGGACACCGAGGATCAGGTCCTATGCAACAGCTCCAGCAGCCATTGCCATTGATGCACCAACAGATGCTTCCAAGGGGACATGTCTATCGATATCCTTCTGGCTCCAATATGCAAAATATTCAACTGGCAGGAGTACCTGGAGGAATGGTCACTTATGGCATTGGTCAACAAATGCCCACGCAGGCCCTGGCCTCGGCCCTTGCCAATGCTACTCCTGAACAGCAGAGGACTATGCTTGGTGAAGCTTTATACCCGTTAGTAGATAAGCTGGAGCATGAAGCAGCAGCAAAGGTTACTGGTATGCTCTTAGAGATGGATCAGCCTGAGGTATTACATCTGATTGAGTCACCGGATGCTCTCAAGGCTAAAGTTGTTGAGGCCATGGATGTGTTGAAGAAAGTTACACAGCAGCAATCAAACAGCCCAGCCGATCAACTGGCTTCACTCTCTCTGAATGATAATGTCGAGTCTTAA
Predicted protein sequences of Glyma.04g040700
>Glyma.04g040700.1.p sequence-type=predicted peptide transcript=Glyma.04g040700.1 locus=Glyma.04g040700 id=Glyma.04g040700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQVLENPTIDAAASGANPSLTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYVALAQRKEDRRARLQAQFSQSRPAAITPNVSPRMPLYPLGAPAIGQQFLYGQAAPATIPQAAFGYQQHFVPGMRPGGAPNFYVPLVQQGQQGQRPGGHRGSGPMQQLQQPLPLMHQQMLPRGHVYRYPSGSNMQNIQLAGVPGGMVTYGIGQQMPTQALASALANATPEQQRTMLGEALYPLVDKLEHEAAAKVTGMLLEMDQPEVLHLIESPDALKAKVVEAMDVLKKVTQQQSNSPADQLASLSLNDNVES*

>Glyma.04g040700.3.p sequence-type=predicted peptide transcript=Glyma.04g040700.3 locus=Glyma.04g040700 id=Glyma.04g040700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQVLENPTIDAAASGANPSLTTISLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFLRKQDRESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFANVDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVAGKPLYVALAQRKEDRRARLQAQFSQSRPAAITPNVSPRMPLYPLGAPAIGQQFLYGQAAPATIPQQHFVPGMRPGGAPNFYVPLVQQGQQGQRPGGHRGSGPMQQLQQPLPLMHQQMLPRGHVYRYPSGSNMQNIQLAGVPGGMVTYGIGQQMPTQALASALANATPEQQRTMLGEALYPLVDKLEHEAAAKVTGMLLEMDQPEVLHLIESPDALKAKVVEAMDVLKKVTQQQSNSPADQLASLSLNDNVES*






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