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Report for Sequence Feature Glyma.04g039400

Feature Type:gene_model
Chromosome:Gm04
Start:3107200
stop:3112819
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g039400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42920.2AT AtTHO5,THO5 JGI N/AIEA
K13174KEGG Spliceosome JGI N/AIEA
KOG2216 KOG Conserved coiled/coiled coil protein JGI N/AIEA
PTHR13375PantherFam FMS INTERACTING PROTEIN JGI N/AIEA
PTHR13375:SF3PantherFam THO COMPLEX SUBUNIT 5 HOMOLOG JGI N/AIEA
PF09766Pfam Fms-interacting protein/Thoc5 JGI N/AIEA

Gene model name correspondences to Glyma.04g039400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g04180 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g039400
>Glyma.04g039400.1 sequence-type=CDS polypeptide=Glyma.04g039400.1.p locus=Glyma.04g039400 id=Glyma.04g039400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGACGGTGAGATTGAAGAGGGATCAATAGGCGGTGTAGAGGAAGAGGAACAATCACCAGAGCCTCACAAGTCGGAGGAATCGCCCTACCAAATGTTGCGCAACAGCAAGGCCTCCGTACAGAACATTGTCGCCGATATGCTCTCCATTAAAAAAGAGGGTAAACCCAAGCAACTACTTCGAGATCTCGTTACTCAGATGTTCCTACATTTCATCACTCTCCGCCAGGCAAATCGCAGTATTTTGCTGGAGGAAGACCGCGTGAAAACCGAAACGGAGCGTGCCAAGGCGCCGGTGGATTTCACCACGCTGCAGCTTCACAACCTCATGTACGAGAAAAGCCACTACGTTAAGGCGATCAAGGCCTGCAAAGACTTCAAGTCCAAATATCCTGACATTGACCTTGTTCCTGAGGAGGACTTTTTCCGCGACGCTCCTCAAGATATCCAGGACTGCTTCTTGTCCAACGACGCCGCGCACAATCTCATGCTCAGAAGGCTCAATTTCGAGCTATTCCAGCGCAAAGAACTCTGCAAACTTCATGAGAAATTGGAACAACAAAAGAAAATCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACCAGTCTCCCTTCACATCTAAAGTCTCTCAAGAAAGCCTCCTTGCCTGTACAAAACCAGCTAGGGCTTCATCATACAAAGAGATTAAAGCAGCATCATTCAGCAGAGTTGCTTCCTCCAGCTCTTTATGTGATTTACTCACAGCTGTTGGCTCAAAAGGAGGCCTTTGGAGAACCCATTGATCTGGAGATTATAGGAAGCCTGAAGGATGCTCAAGCTTTTGCTCGTCAACAAGCTCACAAGGACACTGACATTTCCACTACCGTGGAGAGTTCCAAATTGGAAGATGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGAAAAAGGCCAAGGAGGGTTCAAGCCAAGGAGAGCCTTGACCAGGGGGGAATATATCAAGTTCACCCACTAAAAATCATTATCCATGTGTATGAAGATGAGGCTTCGGGTCCTAAATCTGCAAAACTCATTACTCTAAGGTTCGAGTACTTGGTGAAGTTGAATGTTGTATGTGTTGGAATAGAAGGATCTAATGATGCTCCAGAGAATGACCTCTTATGCAATTTATTCCCTAATGATACGGGACTTGAGCTTCCTCACCAGTCAGCCAAACTCTTTGTTCAAGATGCTATAACATTCAATACTCAAAGAACCTCACGTCCTTATAGATGGGCTCAGCACCTGGCAGGGATTGATTTCTTGCCTGAGATGTCTCCCTTGCTTCTTACTGACAACAGTGGAGCAGCCAAGAATGAAAATGTTATATCTGGTCTTTCACTATATCGCCAGCAGAACCGAGTACCGACAGTTCTGCAGAGAATTCGTGCAAGAAGAAAAGCTCAATTGGCCCTTCTGGAACAGCTAGAATCTCTCACTAAGCTAGAGTGGCCTCGTTTGCCCTGCAAAAGTGTTCCATGGGCTTTACACACTCCTTTGTGCAATTTGGACAGTTGGTCACCTGTAAAACTTCCACCTGTACCTAGAGAGTCCTCATCTCCTGCTGTCATAGATAAAGAAGAGCATATTCAGGAAGCAATGGATGCTGATGTAATTGAACGATCTGGTGCCACAAAAGCAGAACCAGAGAGTATAACAGAAGATGGGGAGCTTCCAACGTTGCTTCCTAAAGTGTCTAAGCTTGGCCTTTCCGCACAACTGAACTTAATTTCAAAAAGTATCGTTCCTCCACTCAATAAAATCAGGTCACAAAGTTTCAAAAAGATTGATGATAGTTCTGATTTCTTGCTGGATACTGAAAGTGATCTTGATGAGCCGGCACAGATTGAACAAGAACATGAAAAATCCAATTATCATGCCAGAAAGTCTGTTTCATGGATGAATTACGGGCTCAAGGAATTTCACTTAGTTATTTGCAGAAAAATCGGTACAGATGAGAGCAATTTGAATTTAGAAGCCAAGATCCAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTCTATTGAGCATTAGTTGTATATCGTCTGGGGAAAACCATGATGAGACAGGATTGGAGTGGTACAATGAACTTCGTGCAATGGAAGCAGAGGTCAATCTACACTTACTAAAGATGTTAACTGTCAATCAAAAAAATTTTGTATTGGCTCATCAAGTGAGTTGTCTTGCTATGTTGTTTGACTATTATTTGGATGAGGCATCCCCATCATCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGCTTATGCAAGCCTGTTTCTGGTAGATTCCTGGGTAGATCTTTTAGAGGAAGGGATCGCAGGAAGATGATCTCATGGAAAGACATGAAACTTAATTCCAGCTGTATCTAA

>Glyma.04g039400.3 sequence-type=CDS polypeptide=Glyma.04g039400.3.p locus=Glyma.04g039400 id=Glyma.04g039400.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGACGGTGAGATTGAAGAGGGATCAATAGGCGGTGTAGAGGAAGAGGAACAATCACCAGAGCCTCACAAGTCGGAGGAATCGCCCTACCAAATGTTGCGCAACAGCAAGGCCTCCGTACAGAACATTGTCGCCGATATGCTCTCCATTAAAAAAGAGGGTAAACCCAAGCAACTACTTCGAGATCTCGTTACTCAGATGTTCCTACATTTCATCACTCTCCGCCAGGCAAATCGCAGTATTTTGCTGGAGGAAGACCGCGTGAAAACCGAAACGGAGCGTGCCAAGGCGCCGGTGGATTTCACCACGCTGCAGCTTCACAACCTCATGTACGAGAAAAGCCACTACGTTAAGGCGATCAAGGCCTGCAAAGACTTCAAGTCCAAATATCCTGACATTGACCTTGTTCCTGAGGAGGACTTTTTCCGCGACGCTCCTCAAGATATCCAGGACTGCTTCTTGTCCAACGACGCCGCGCACAATCTCATGCTCAGAAGGCTCAATTTCGAGCTATTCCAGCGCAAAGAACTCTGCAAACTTCATGAGAAATTGGAACAACAAAAGAAAATCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACCAGTCTCCCTTCACATCTAAAGTCTCTCAAGAAAGCCTCCTTGCCTGTACAAAACCAGCTAGGGCTTCATCATACAAAGAGATTAAAGCAGCATCATTCAGCAGAGTTGCTTCCTCCAGCTCTTTATGTGATTTACTCACAGCTGTTGGCTCAAAAGGAGGCCTTTGGAGAACCCATTGATCTGGAGATTATAGGAAGCCTGAAGGATGCTCAAGCTTTTGCTCGTCAACAAGCTCACAAGGACACTGACATTTCCACTACCGTGGAGAGTTCCAAATTGGAAGATGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGAAAAAGGCCAAGGAGGGTTCAAGCCAAGGAGAGCCTTGACCAGGGGGGAATATATCAAGTTCACCCACTAAAAATCATTATCCATGTGTATGAAGATGAGGCTTCGGGTCCTAAATCTGCAAAACTCATTACTCTAAGGTTCGAGTACTTGGTGAAGTTGAATGTTGTATGTGTTGGAATAGAAGGATCTAATGATGCTCCAGAGAATGACCTCTTATGCAATTTATTCCCTAATGATACGGGACTTGAGCTTCCTCACCAGTCAGCCAAACTCTTTGTTCAAGATGCTATAACATTCAATACTCAAAGAACCTCACGTCCTTATAGATGGGCTCAGCACCTGGCAGGGATTGATTTCTTGCCTGAGATGTCTCCCTTGCTTCTTACTGACAACAGTGGAGCAGCCAAGAATGAAAATGTTATATCTGGTCTTTCACTATATCGCCAGCAGAACCGAGTACCGACAGTTCTGCAGAGAATTCGTGCAAGAAGAAAAGCTCAATTGGCCCTTCTGGAACAGCTAGAATCTCTCACTAAGCTAGAGTGGCCTCGTTTGCCCTGCAAAAGTGTTCCATGGGCTTTACACACTCCTTTGTGCAATTTGGACAGTTGGTCACCTGTAAAACTTCCACCTGTACCTAGAGAGTCCTCATCTCCTGCTGTCATAGATAAAGAAGAGCATATTCAGGAAGCAATGGATGCTGATGTAATTGAACGATCTGGTGCCACAAAAGCAGAACCAGAGAGTATAACAGAAGATGGGGAGCTTCCAACGTTGCTTCCTAAAGTGTCTAAGCTTGGCCTTTCCGCACAACTGAACTTAATTTCAAAAAGTATCGTTCCTCCACTCAATAAAATCAGGTCACAAAGTTTCAAAAAGATTGATGATAGTTCTGATTTCTTGCTGGATACTGAAAGTGATCTTGATGAGCCGGCACAGATTGAACAAGAACATGAAAAATCCAATTATCATGCCAGAAAGTCTGTTTCATGGATGAATTACGGGCTCAAGGAATTTCACTTAGTTATTTGCAGAAAAATCGGTACAGATGAGAGCAATTTGAATTTAGAAGCCAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTCTATTGAGCATTAGTTGTATATCGTCTGGGGAAAACCATGATGAGACAGGATTGGAGTGGTACAATGAACTTCGTGCAATGGAAGCAGAGGTCAATCTACACTTACTAAAGATGTTAACTGTCAATCAAAAAAATTTTGTATTGGCTCATCAAGTGAGTTGTCTTGCTATGTTGTTTGACTATTATTTGGATGAGGCATCCCCATCATCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGCTTATGCAAGCCTGTTTCTGGTAGATTCCTGGGTAGATCTTTTAGAGGAAGGGATCGCAGGAAGATGATCTCATGGAAAGACATGAAACTTAATTCCAGCTGTATCTAA
Predicted protein sequences of Glyma.04g039400
>Glyma.04g039400.1.p sequence-type=predicted peptide transcript=Glyma.04g039400.1 locus=Glyma.04g039400 id=Glyma.04g039400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEDGEIEEGSIGGVEEEEQSPEPHKSEESPYQMLRNSKASVQNIVADMLSIKKEGKPKQLLRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACKDFKSKYPDIDLVPEEDFFRDAPQDIQDCFLSNDAAHNLMLRRLNFELFQRKELCKLHEKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDTDISTTVESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIYQVHPLKIIIHVYEDEASGPKSAKLITLRFEYLVKLNVVCVGIEGSNDAPENDLLCNLFPNDTGLELPHQSAKLFVQDAITFNTQRTSRPYRWAQHLAGIDFLPEMSPLLLTDNSGAAKNENVISGLSLYRQQNRVPTVLQRIRARRKAQLALLEQLESLTKLEWPRLPCKSVPWALHTPLCNLDSWSPVKLPPVPRESSSPAVIDKEEHIQEAMDADVIERSGATKAEPESITEDGELPTLLPKVSKLGLSAQLNLISKSIVPPLNKIRSQSFKKIDDSSDFLLDTESDLDEPAQIEQEHEKSNYHARKSVSWMNYGLKEFHLVICRKIGTDESNLNLEAKIQISMEYPLRPPLFLLSISCISSGENHDETGLEWYNELRAMEAEVNLHLLKMLTVNQKNFVLAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVSGRFLGRSFRGRDRRKMISWKDMKLNSSCI*

>Glyma.04g039400.3.p sequence-type=predicted peptide transcript=Glyma.04g039400.3 locus=Glyma.04g039400 id=Glyma.04g039400.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEDGEIEEGSIGGVEEEEQSPEPHKSEESPYQMLRNSKASVQNIVADMLSIKKEGKPKQLLRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKSHYVKAIKACKDFKSKYPDIDLVPEEDFFRDAPQDIQDCFLSNDAAHNLMLRRLNFELFQRKELCKLHEKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDTDISTTVESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIYQVHPLKIIIHVYEDEASGPKSAKLITLRFEYLVKLNVVCVGIEGSNDAPENDLLCNLFPNDTGLELPHQSAKLFVQDAITFNTQRTSRPYRWAQHLAGIDFLPEMSPLLLTDNSGAAKNENVISGLSLYRQQNRVPTVLQRIRARRKAQLALLEQLESLTKLEWPRLPCKSVPWALHTPLCNLDSWSPVKLPPVPRESSSPAVIDKEEHIQEAMDADVIERSGATKAEPESITEDGELPTLLPKVSKLGLSAQLNLISKSIVPPLNKIRSQSFKKIDDSSDFLLDTESDLDEPAQIEQEHEKSNYHARKSVSWMNYGLKEFHLVICRKIGTDESNLNLEAKISMEYPLRPPLFLLSISCISSGENHDETGLEWYNELRAMEAEVNLHLLKMLTVNQKNFVLAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVSGRFLGRSFRGRDRRKMISWKDMKLNSSCI*






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