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Report for Sequence Feature Glyma.04g034400

Feature Type:gene_model
Chromosome:Gm04
Start:2751147
stop:2752368
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g034400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G36830.1AT GNS1/SUR4 membrane protein family JGI N/AIEA
GO:0019367GO-bp fatty acid elongation, saturated fatty acid EnsemblGenomesN/AIEA
GO:0030148GO-bp sphingolipid biosynthetic process EnsemblGenomesN/AIEA
GO:0034625GO-bp fatty acid elongation, monounsaturated fatty acid EnsemblGenomesN/AIEA
GO:0034626GO-bp fatty acid elongation, polyunsaturated fatty acid EnsemblGenomesN/AIEA
GO:0042761GO-bp very long-chain fatty acid biosynthetic process EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
GO:0030176GO-cc integral component of endoplasmic reticulum membrane EnsemblGenomesN/AIEA
GO:0009922GO-mf fatty acid elongase activity EnsemblGenomesN/AIEA
KOG3071 KOG Fatty acyl-CoA elongase/Polyunsaturated fatty acid specific elongation enzyme JGI N/AIEA
PTHR11157Panther FATTY ACID ACYL TRANSFERASE-RELATED JGI N/AIEA
PTHR11157:SF3Panther JGI N/AIEA
PF01151PFAM GNS1/SUR4 family JGI N/AIEA
PWY-5080SoyCyc9 very long chain fatty acid biosynthesis I Plant Metabolic Network ISS
GN7V-66836SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.04g034400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04g034400 not represented in the dataset
Glyma.04g034400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g034400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g03670 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g034400
>Glyma.04g034400.1 sequence-type=CDS polypeptide=Glyma.04g034400.1.p locus=Glyma.04g034400 ID=Glyma.04g034400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGCATGAAATATTGGCTAATAGAGCACCCAGCCATGGTCTCTTTCCGGTGGAGTCCCACCCAATCATACGGCGGCACGTGGTGGTTCCTAATCTCCGCCACCAGCTTTTACGTCGCGGCCGCCGTAACCCTTCACCTACTCCTCAAATTTTTCCGTCGCCGCCGCGCCGTGCCGTTGGGTCCCATCCCCGCCCTCCACAGCCTCGCCATGTCGTTGATCTCCGCCGCCATATTCACCGGCATGTTCTTCTCCGCCGAAGCCGAAGCCCGCGACACGCGGTGGCTGTGGCGGCGCTCCCGAACCACCTCGTTTGAGTGGCTGCTCTGTTTCCCACTCGGCACTCGCCCTTCTGGTCGTGTCTTCTTCTGGTCCTACGTTTTCTACCTCTCACGCTTCCTCCACCTGCTTCGCACCTTCTTCGTCGTTTTGCGTCACCGAAGGTTGTCGTTTTTCAGGCTGTTCAACAACTCCGTCCTTTTAATCATGTCGTTTCTGTGGCTCGAGTTTTCGCAGTCGCTTCAGGTGCTGGCGATTCTTTTTTACACGGCGGTTTATTCCGTCGTTTACGCGTTTCGGTTCTGGACGGAAATCGGGTTGCCTACCAAAACGCCGTTAGCGTTGTCGTTCACCGCGAATTTTCAGATAGTGCTGTTGGGTTTTAACTTAATGTGCCACGTTGGAGTGCTCTCGTTGCATTACTTGAGAGGAGGGTGTAATGGAATCGGGGCTTGGGTTTTTAACTCCGTGTTAAACGCTGCTTTTCTCGTTCAGTTCTTGAAGTCCTATGTGAAAACGCATTGTCATAGCCAAAGAGGTAAGAGAAAGAGATTGTCCCTTTCTTCTCATTAG
Predicted protein sequences of Glyma.04g034400
>Glyma.04g034400.1.p sequence-type=predicted peptide transcript=Glyma.04g034400.1 locus=Glyma.04g034400 ID=Glyma.04g034400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MESMKYWLIEHPAMVSFRWSPTQSYGGTWWFLISATSFYVAAAVTLHLLLKFFRRRRAVPLGPIPALHSLAMSLISAAIFTGMFFSAEAEARDTRWLWRRSRTTSFEWLLCFPLGTRPSGRVFFWSYVFYLSRFLHLLRTFFVVLRHRRLSFFRLFNNSVLLIMSFLWLEFSQSLQVLAILFYTAVYSVVYAFRFWTEIGLPTKTPLALSFTANFQIVLLGFNLMCHVGVLSLHYLRGGCNGIGAWVFNSVLNAAFLVQFLKSYVKTHCHSQRGKRKRLSLSSH*






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