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Report for Sequence Feature Glyma.04g032600

Feature Type:gene_model
Chromosome:Gm04
Start:2589457
stop:2598211
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g032600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42740.1AT Sugar isomerase (SIS) family protein JGI N/AIEA
GO:0006094GO-bp gluconeogenesis EnsemblGenomesN/AIEA
GO:0006094GO-bp gluconeogenesis JGI N/AIEA
GO:0006096GO-bp glycolytic process EnsemblGenomesN/AIEA
GO:0006096GO-bp glycolysis JGI N/AIEA
GO:0004347GO-mf glucose-6-phosphate isomerase activity EnsemblGenomesN/AIEA
GO:0004347GO-mf glucose-6-phosphate isomerase activity JGI N/AIEA
GO:0016853GO-mf isomerase activity EnsemblGenomesN/AIEA
KOG2446 KOG Glucose-6-phosphate isomerase JGI N/AIEA
PTHR11469Panther GLUCOSE-6-PHOSPHATE ISOMERASE JGI N/AIEA
PF00342PFAM Phosphoglucose isomerase JGI N/AIEA
GLUCONEO-PWYSoyCyc9 gluconeogenesis I Plant Metabolic Network ISS
GLYCOLYSISSoyCyc9 glycolysis I (from glucose 6-phosphate) Plant Metabolic Network ISS
PWY-3801SoyCyc9 sucrose degradation II (sucrose synthase) Plant Metabolic Network ISS
PWY-5659SoyCyc9 GDP-mannose biosynthesis Plant Metabolic Network ISS
PWY-621SoyCyc9 sucrose degradation III (sucrose invertase) Plant Metabolic Network ISS
PWY-622SoyCyc9 starch biosynthesis Plant Metabolic Network ISS
PWY-7238SoyCyc9 sucrose biosynthesis II Plant Metabolic Network ISS
PWY-7345SoyCyc9 superpathway of anaerobic sucrose degradation Plant Metabolic Network ISS
PWYQT-4466SoyCyc9 superpathway of sucrose and starch metabolism I (non-photosynthetic tissue) Plant Metabolic Network ISS
SUCSYN-PWYSoyCyc9 sucrose biosynthesis I (from photosynthesis) Plant Metabolic Network ISS
GN7V-61950SoyCyc9-rxn glucose-6-phosphate isomerase Plant Metabolic Network ISS

Expression Patterns of Glyma.04g032600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g032600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g03490 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.04g032600
>Glyma.04g032600.2 sequence-type=transcript locus=Glyma.04g032600 ID=Glyma.04g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CTCCCGCTTATCCCAGTGTTTCCCTTCTTTTTGTTTTGAAAAAAGTACTAGAATATTTTAAAAATAAATGTGAAATAATTTTTATATTTTTAACAAATATTTTGTACTTTTATTCCGTCAAGGTGTAAGTTGTAACCTTTGCCACTGGGCTCCGACTTACATCCAACGCACAAAGCGAGTCACTCACTCATGGCATCCTCCGCTCTCATCTCCGACACCCAGCAATGGAAGGACCTCAAGGCACATGTGGAGGACATCAATAAAACACATCTTCGCGATCTATTGAGCGATGATAAGCGGTGCCAGTCCATGCTCGTTGAATTCGATGACATTCTGTTGGACTATTCAAGGCAACAAGCCACTCCTGAAACTATCCAGAAGCTATTTGAATTAGCGGAGGCTGCATCGCTCAAAGAAAAGATTATCCGCATGTACAGTGGGGAACATATAAATAGCACAGAAAATAGATCAGTGCTTCATGTCGCTCTTCGAGCTTCAAGGGATGCTGTCATACAGAGTGATGGGCAGAATGTTGTCCCTGAAGTTTGGAAAGTTCTTGACAAGATCCAGGAGTTCTCTGAGCAGATTCGCAATGGTTCTTGGGTTGGTGCTACAGGAAAGGCTTTGAAGGACGTTGTTGCAATTGGTATTGGGGGAAGCTTCTTAGGTCCACTGTTTGTACACACTGCACTTCAAACAGACCCCGAAGCTGTTGAATCTGCAAGGGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCTATTGACGTGGCTAGAAATATCACAGGATTAAATCCTGAAACAACACTTGTTGTGGTTGTTTCAAAGACTTTTACAACTGCTGAGACTATGCTGAATGCTCGAACTCTTAGAGAATGGATTTCATCAGCACTTGGGCCCTCTGCAGTTGCAAAGCATATGGTGGCTGTTAGCACAAATCTCACGCTTGTGGAAAAGTTTGGTATTGATCCTAAAAATGCTTTTGCATTTTGGGATTGGGTCGGTGGTCGGTATAGTGTTTGCAGTGCTGTTGGAATTTTGCCATTATCTCTACAATACGGTTTCTCTGTGATAGAGAAGTTCTTAAGGGGGGCTTCAAGCATTGATCAACATTTCTATTCGCAGCCATTTGAAAGCAATATACCTGTGCTTCTGGGTTTGTTGAGCATATGGAATGTTACATTTCTTGGATATCCTGCCAGAGCCATCTTACCTTATAGTCAAGCTCTGGAGAAGTTTGCCCCACACATTCAACAGGTTAGCATGGAGAGTAATGGAAAGGGTGTCTCGATTGATGGCGTCCCTCTACCATTTGAGGCTGGTGAAATTGATTTTGGTGAACCTGGAACTAATGGGCAGCATAGCTTTTATCAGCTCATACATCAGGGGCGTGTAATTCCTTGTGATTTTATTGGAGTTGTGAAAAGTCAGCAACCTGTCTTTCTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTAATGTCCAACTATTTTGCACAGTCTGATGCCCTTGCATATGGGAAGACAGCTGAGCAGCTACAAAAGGAGAATGTTTCCCCACACCTTATTCCTCACAAGACATTCAGCGGCAATCGACCTTCTCTCAGCCTACTGCTTCCATCATTGAATGCTTATAATATTGGGCAGGTATGAAGTTCACAAGGTTGTAATTAGTAATTAGAGGGAAATGGTTAATTCCTGTTTGCGGAAGTTTTAATTGTGTCAGTTACTTGTTTTCTTCAGCATGTTTGGCTGGAAAATTAG
Coding sequences of Glyma.04g032600
>Glyma.04g032600.1 sequence-type=CDS polypeptide=Glyma.04g032600.1.p locus=Glyma.04g032600 ID=Glyma.04g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCCTCCGCTCTCATCTCCGACACCCAGCAATGGAAGGACCTCAAGGCACATGTGGAGGACATCAATAAAACACATCTTCGCGATCTATTGAGCGATGATAAGCGGTGCCAGTCCATGCTCGTTGAATTCGATGACATTCTGTTGGACTATTCAAGGCAACAAGCCACTCCTGAAACTATCCAGAAGCTATTTGAATTAGCGGAGGCTGCATCGCTCAAAGAAAAGATTATCCGCATGTACAGTGGGGAACATATAAATAGCACAGAAAATAGATCAGTGCTTCATGTCGCTCTTCGAGCTTCAAGGGATGCTGTCATACAGAGTGATGGGCAGAATGTTGTCCCTGAAGTTTGGAAAGTTCTTGACAAGATCCAGGAGTTCTCTGAGCAGATTCGCAATGGTTCTTGGGTTGGTGCTACAGGAAAGGCTTTGAAGGACGTTGTTGCAATTGGTATTGGGGGAAGCTTCTTAGGTCCACTGTTTGTACACACTGCACTTCAAACAGACCCCGAAGCTGTTGAATCTGCAAGGGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCTATTGACGTGGCTAGAAATATCACAGGATTAAATCCTGAAACAACACTTGTTGTGGTTGTTTCAAAGACTTTTACAACTGCTGAGACTATGCTGAATGCTCGAACTCTTAGAGAATGGATTTCATCAGCACTTGGGCCCTCTGCAGTTGCAAAGCATATGGTGGCTGTTAGCACAAATCTCACGCTTGTGGAAAAGTTTGGTATTGATCCTAAAAATGCTTTTGCATTTTGGGATTGGGTCGGTGGTCGGTATAGTGTTTGCAGTGCTGTTGGAATTTTGCCATTATCTCTACAATACGGTTTCTCTGTGATAGAGAAGTTCTTAAGGGGGGCTTCAAGCATTGATCAACATTTCTATTCGCAGCCATTTGAAAGCAATATACCTGTGCTTCTGGGTTTGTTGAGCATATGGAATGTTACATTTCTTGGATATCCTGCCAGAGCCATCTTACCTTATAGTCAAGCTCTGGAGAAGTTTGCCCCACACATTCAACAGGTTAGCATGGAGAGTAATGGAAAGGGTGTCTCGATTGATGGCGTCCCTCTACCATTTGAGGCTGGTGAAATTGATTTTGGTGAACCTGGAACTAATGGGCAGCATAGCTTTTATCAGCTCATACATCAGGGGCGTGTAATTCCTTGTGATTTTATTGGAGTTGTGAAAAGTCAGCAACCTGTCTTTCTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTAATGTCCAACTATTTTGCACAGTCTGATGCCCTTGCATATGGGAAGACAGCTGAGCAGCTACAAAAGGAGAATGTTTCCCCACACCTTATTCCTCACAAGACATTCAGCGGCAATCGACCTTCTCTCAGCCTACTGCTTCCATCATTGAATGCTTATAATATTGGGCAGTTGTTGGCAATCTATGAACACAGAATTGCTGTAGAGGGTTTCATTTGGGGAATCAATTCTTTTGATCAGTGGGGAGTAGAGCTGGGGAAGTCACTGGCTACTCAAGTCAGAAAGCAACTTAATGCATCTCGTACTAAAGGAGAACCAGTTCAGGGCTTTAATTTCAGTACTACAACAATGTTGACAAGATATCTTCAGGCAAGTTCAGATGTCCCAGCGGATCTGCCAACTGTTTTACCGAAGATCTAA

>Glyma.04g032600.2 sequence-type=CDS polypeptide=Glyma.04g032600.2.p locus=Glyma.04g032600 ID=Glyma.04g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCATCCTCCGCTCTCATCTCCGACACCCAGCAATGGAAGGACCTCAAGGCACATGTGGAGGACATCAATAAAACACATCTTCGCGATCTATTGAGCGATGATAAGCGGTGCCAGTCCATGCTCGTTGAATTCGATGACATTCTGTTGGACTATTCAAGGCAACAAGCCACTCCTGAAACTATCCAGAAGCTATTTGAATTAGCGGAGGCTGCATCGCTCAAAGAAAAGATTATCCGCATGTACAGTGGGGAACATATAAATAGCACAGAAAATAGATCAGTGCTTCATGTCGCTCTTCGAGCTTCAAGGGATGCTGTCATACAGAGTGATGGGCAGAATGTTGTCCCTGAAGTTTGGAAAGTTCTTGACAAGATCCAGGAGTTCTCTGAGCAGATTCGCAATGGTTCTTGGGTTGGTGCTACAGGAAAGGCTTTGAAGGACGTTGTTGCAATTGGTATTGGGGGAAGCTTCTTAGGTCCACTGTTTGTACACACTGCACTTCAAACAGACCCCGAAGCTGTTGAATCTGCAAGGGGTCGTCAGCTGCGCTTTCTTGCAAATGTTGATCCTATTGACGTGGCTAGAAATATCACAGGATTAAATCCTGAAACAACACTTGTTGTGGTTGTTTCAAAGACTTTTACAACTGCTGAGACTATGCTGAATGCTCGAACTCTTAGAGAATGGATTTCATCAGCACTTGGGCCCTCTGCAGTTGCAAAGCATATGGTGGCTGTTAGCACAAATCTCACGCTTGTGGAAAAGTTTGGTATTGATCCTAAAAATGCTTTTGCATTTTGGGATTGGGTCGGTGGTCGGTATAGTGTTTGCAGTGCTGTTGGAATTTTGCCATTATCTCTACAATACGGTTTCTCTGTGATAGAGAAGTTCTTAAGGGGGGCTTCAAGCATTGATCAACATTTCTATTCGCAGCCATTTGAAAGCAATATACCTGTGCTTCTGGGTTTGTTGAGCATATGGAATGTTACATTTCTTGGATATCCTGCCAGAGCCATCTTACCTTATAGTCAAGCTCTGGAGAAGTTTGCCCCACACATTCAACAGGTTAGCATGGAGAGTAATGGAAAGGGTGTCTCGATTGATGGCGTCCCTCTACCATTTGAGGCTGGTGAAATTGATTTTGGTGAACCTGGAACTAATGGGCAGCATAGCTTTTATCAGCTCATACATCAGGGGCGTGTAATTCCTTGTGATTTTATTGGAGTTGTGAAAAGTCAGCAACCTGTCTTTCTAAAAGGTGAAGTGGTGAGTAACCATGATGAGCTAATGTCCAACTATTTTGCACAGTCTGATGCCCTTGCATATGGGAAGACAGCTGAGCAGCTACAAAAGGAGAATGTTTCCCCACACCTTATTCCTCACAAGACATTCAGCGGCAATCGACCTTCTCTCAGCCTACTGCTTCCATCATTGAATGCTTATAATATTGGGCAGGTATGA
Predicted protein sequences of Glyma.04g032600
>Glyma.04g032600.1.p sequence-type=predicted peptide transcript=Glyma.04g032600.1 locus=Glyma.04g032600 ID=Glyma.04g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASSALISDTQQWKDLKAHVEDINKTHLRDLLSDDKRCQSMLVEFDDILLDYSRQQATPETIQKLFELAEAASLKEKIIRMYSGEHINSTENRSVLHVALRASRDAVIQSDGQNVVPEVWKVLDKIQEFSEQIRNGSWVGATGKALKDVVAIGIGGSFLGPLFVHTALQTDPEAVESARGRQLRFLANVDPIDVARNITGLNPETTLVVVVSKTFTTAETMLNARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPKNAFAFWDWVGGRYSVCSAVGILPLSLQYGFSVIEKFLRGASSIDQHFYSQPFESNIPVLLGLLSIWNVTFLGYPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVFLKGEVVSNHDELMSNYFAQSDALAYGKTAEQLQKENVSPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQLLAIYEHRIAVEGFIWGINSFDQWGVELGKSLATQVRKQLNASRTKGEPVQGFNFSTTTMLTRYLQASSDVPADLPTVLPKI*

>Glyma.04g032600.2.p sequence-type=predicted peptide transcript=Glyma.04g032600.2 locus=Glyma.04g032600 ID=Glyma.04g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MASSALISDTQQWKDLKAHVEDINKTHLRDLLSDDKRCQSMLVEFDDILLDYSRQQATPETIQKLFELAEAASLKEKIIRMYSGEHINSTENRSVLHVALRASRDAVIQSDGQNVVPEVWKVLDKIQEFSEQIRNGSWVGATGKALKDVVAIGIGGSFLGPLFVHTALQTDPEAVESARGRQLRFLANVDPIDVARNITGLNPETTLVVVVSKTFTTAETMLNARTLREWISSALGPSAVAKHMVAVSTNLTLVEKFGIDPKNAFAFWDWVGGRYSVCSAVGILPLSLQYGFSVIEKFLRGASSIDQHFYSQPFESNIPVLLGLLSIWNVTFLGYPARAILPYSQALEKFAPHIQQVSMESNGKGVSIDGVPLPFEAGEIDFGEPGTNGQHSFYQLIHQGRVIPCDFIGVVKSQQPVFLKGEVVSNHDELMSNYFAQSDALAYGKTAEQLQKENVSPHLIPHKTFSGNRPSLSLLLPSLNAYNIGQV*






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