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Report for Sequence Feature Glyma.04g030600

Feature Type:gene_model
Chromosome:Gm04
Start:2489501
stop:2492469
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04g030600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G19600.1AT pfkB-like carbohydrate kinase family protein JGI N/AIEA
KOG2854 KOG Possible pfkB family carbohydrate kinase JGI N/AIEA
PTHR10584Panther SUGAR KINASE JGI N/AIEA
PTHR10584:SF26Panther JGI N/AIEA
PF00294PFAM pfkB family carbohydrate kinase JGI N/AIEA
GLYCOLYSISSoyCyc9 glycolysis I (from glucose 6-phosphate) Plant Metabolic Network ISS
PWY-1042SoyCyc9 glycolysis IV (plant cytosol) Plant Metabolic Network ISS
PWY-5464SoyCyc9 superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle Plant Metabolic Network ISS
PWY-5484SoyCyc9 glycolysis II (from fructose 6-phosphate) Plant Metabolic Network ISS
PWY-7345SoyCyc9 superpathway of anaerobic sucrose degradation Plant Metabolic Network ISS
GN7V-66538SoyCyc9-rxn 6-phosphofructokinase Plant Metabolic Network ISS

Expression Patterns of Glyma.04g030600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04g030600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g03290 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g030600
>Glyma.04g030600.1 sequence-type=CDS polypeptide=Glyma.04g030600.1.p locus=Glyma.04g030600 ID=Glyma.04g030600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGCGGAGAGGTTTTCCCACGACCATGCTCCCTTGATTCTGGGTCTCCAGCCATCCGCCCTGGTCGACAACGTTGCCACCGTCGATTGGTCCTTGCTCCATCGCATTCCCGGCGAGCGCGGTGGCTCCATCCCTGTCCAAATTGAAGAACTGGAATCCATACTGAGAGAGGTTAAATCCAAATCCCACGATGACATCAAAACTCTCGCTGGTGGCAGCGTTGCCAACACAATTCGCGGTCTCAGTCGCGGTTTTGGAATTTCCACCGGAATTATTGGAGCTTATGGAGATGACCACCAAGGCCAGCTTTTTCTCACCAACATGACCTTCAACTCTGTCGACCTCTCAAGACTCCGTCAAAAGAAAGGACACACTGCACAGTGTGTTTGCTTGGTAGATGACATGGGTAACCGTACAATGCGGCCCTGTCTCTCAAATGCTGTCAAAGTTCAGGCACAAGAATTGGTGAAAGAGGATTTCAAGGGCTCCAAGTGGTTGGTATTGAGATATGCGGTACTCAACTTGGAGGTTATTCAAGCAGCAATTCATTTAGCCAAACAGGAAGGCCTTCTTGTTTCCTTGGATTTGGCCAGTTTTGAGATGGTGAGGAACTTTAAACTACCGCTTCTCAAGCTACTGGAATCTGGGAACATAGACCTCTGCTTTGCCAATGAGGATGAAGCAGCTGAACTTTTAAGGGATGAACAGAAAGATGATCCTATAGCTGCTGTAGAATTTCTTTCCAAATACTGCCAATGGGCTGTTGTAACATTGGGTGCTAATGGGTGCATTGCCAAACATGGAAAGGAGATGATACAAGTCCCGGCCATTGGGGAAACAAAGGCAACCGATGCTACAGGAGCAGGGGACCTTTTTGCAAGTGGATTTTTGTATGGAGTGGTCAAGGGTTTGTCACTAGAAGAATGCTGCAAAGTAGGCACATGCAGTGGTGGATCTGTTATCCGGTCTCTTGGTGGTGAGGTAACGTTGGAGAATTGGCAATGGATGTACAAGCAGATGCAGATAAACGGTCTGCCCACGCCTTCCGGTTTATGCAAATGA
Predicted protein sequences of Glyma.04g030600
>Glyma.04g030600.1.p sequence-type=predicted peptide transcript=Glyma.04g030600.1 locus=Glyma.04g030600 ID=Glyma.04g030600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGAERFSHDHAPLILGLQPSALVDNVATVDWSLLHRIPGERGGSIPVQIEELESILREVKSKSHDDIKTLAGGSVANTIRGLSRGFGISTGIIGAYGDDHQGQLFLTNMTFNSVDLSRLRQKKGHTAQCVCLVDDMGNRTMRPCLSNAVKVQAQELVKEDFKGSKWLVLRYAVLNLEVIQAAIHLAKQEGLLVSLDLASFEMVRNFKLPLLKLLESGNIDLCFANEDEAAELLRDEQKDDPIAAVEFLSKYCQWAVVTLGANGCIAKHGKEMIQVPAIGETKATDATGAGDLFASGFLYGVVKGLSLEECCKVGTCSGGSVIRSLGGEVTLENWQWMYKQMQINGLPTPSGLCK*






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