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Report for Sequence Feature Glyma.04g020900

Feature Type:gene_model
Chromosome:Gm04
Start:1641431
stop:1647395
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g020900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G76050.2AT JGI N/AIEA
5.4.99.23EC 23S rRNA pseudouridine1911/1915/1917 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K15452KEGG Mitochondrial biogenesis JGI N/AIEA
KOG1919 KOG RNA pseudouridylate synthases JGI N/AIEA
PTHR11079PantherFam CYTOSINE DEAMINASE FAMILY MEMBER JGI N/AIEA
PF00849Pfam RNA pseudouridylate synthase JGI N/AIEA
PF01479Pfam S4 domain JGI N/AIEA

Gene model name correspondences to Glyma.04g020900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g02320 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g020900
>Glyma.04g020900.12 sequence-type=CDS polypeptide=Glyma.04g020900.12.p locus=Glyma.04g020900 id=Glyma.04g020900.12.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCTATCGTTTCACTCATGTGGATGTTGCCGCGTTTCCGCTTCCCGAGCATTCCAATTTCAATTTCAAACCGCACCTTCTCCTTCACTCTTTCTCTCAGCTACGAGCTATAAATTTCGTTCTGCCACCGCGAGCGCCGCTTCTGGTTCCGCCGGCGACTCAGACTCCGATGGAGAGCCAAAATTGAACTTCTCGGGTGTGCGGTTGGAGGAGGCAGTCGATAGCAGAATCGGATCTGGAAAACTCAGACTCGACAACTGGATCTCTTCCCGCATCAATGGCATTAGCAGGGCACGAGTTCAATCAAGTATCAAATCAGGACTCGTTCATGTCAATGGCCGTGTCGTTGATAAGGTTTCTTTCAATGTCAAATCTGGGGATGAGATCAAGTGCACAATCGCAGAATTGCAGAATTTGAGGGCCGTGCCACAAAATATACCTTTGGATATCGTTTATGAAGATGAGCATGTTCTAGTCATAAATAAACCTGCACACATGGTTGTGCATCCGGCACCTGGCAATACATCTGGAACGCTTGTCAATGGCATTCTTCACCATTGCAACCTTCCAAATGTTGAATTTTCTAAAGACGAAGCTCTTTCAGATACAGAAGATTCTGATGATGAGTTCAATAGTTATATCTCCCTGGCAAGTTCTTGTGAGGGGTTAAATTCTAGACTGTCTGTGGCATCAAATTCAATTCGCCCAGGGATTGTACACAGATTGGACAAAGGCACGAGTGGGTTACTTGTTGTTGCAAAGGATGAACATTCACACATGAAATTGTCAGAGCAATTCAAGCAACGAACCATTAAGAGGCTTTATGTCAGTCTTACTGCTGGGGTACCCACTCCAGTTGCTGGGCGTGTTGAGGTTCCAGTTGGCCGTGATACTAATAACCGGATTCGTATGACTGCTGTAACTGGACCAGTTAATTCTAAAAAGGCCCGTTATGCTGCTAGTAGGTACAAAGTAATTGAGATACTTGCTGGGGGGAGTTGTTCATTGGTTGAGTGGAAGTTGGAAACTGGACGCACTCATCAGATTCGCGCACATGCTAAGTATTTGGGAGTTCCCCTACTGGGTGATGAGTTGTATGGAGGGACAAAAAGCATGGTCTTGTCACTGCTAAGGCCCCGAACTCCCATCAGTTTGCATAGCAAAATCGTAAAAATGGTTTCTAGGCTAGATAGGCCTTGCCTTCATGCTTGGACTCTCGGGTTTCAGCATCCCCATACAGGGGAGCAGGTGCATTTTTCATGCGAACCCCCTGCAGACTTCGCTGAGATTTTGAGCCAGCTTCGTAGAATTGGTAGTGAGACGGTTTCTTTCACAAAGCGTTCAAATTCATGA
Predicted protein sequences of Glyma.04g020900
>Glyma.04g020900.12.p sequence-type=predicted peptide transcript=Glyma.04g020900.12 locus=Glyma.04g020900 id=Glyma.04g020900.12.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLSFHSCGCCRVSASRAFQFQFQTAPSPSLFLSATSYKFRSATASAASGSAGDSDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRINGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNSYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSCEPPADFAEILSQLRRIGSETVSFTKRSNS*






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