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Report for Sequence Feature Glyma.04g020600

Feature Type:gene_model
Chromosome:Gm04
Start:1621685
stop:1623145
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g020600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20330.1AT CVP1,FRL1,SMT2 JGI N/AIEA
2.1.1.142EC cycloartenol 24-C-methyltransferase JGI N/AIEA
2.1.1.143EC 24-methylenesterol C-methyltransferase JGI N/AIEA
GO:0006694GO-bp steroid biosynthetic process JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0008168GO-mf methyltransferase activity JGI N/AIEA
K08242KEGG Steroid biosynthesis JGI N/AIEA
KOG1269 KOG SAM-dependent methyltransferases JGI N/AIEA
PTHR10108PantherFam SAM-DEPENDENT METHYLTRANSFERASE JGI N/AIEA
PF08241Pfam Methyltransferase domain JGI N/AIEA
PF08498Pfam Sterol methyltransferase C-terminal JGI N/AIEA

Proteins Associated with Glyma.04g020600
LocusGene SymbolProtein Name
SMT2-1 sterol 24-C methyltransferase 2-1

Gene model name correspondences to Glyma.04g020600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g02271 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g020600
>Glyma.04g020600.1 sequence-type=CDS polypeptide=Glyma.04g020600.1.p locus=Glyma.04g020600 id=Glyma.04g020600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACCCCCTCTCTCTCTTCTGCACCGGAGCCCTCCTCGCCGGCGGCCTCTACTGGTTCGTGTGCGTTCTGGGCCCCGCCGAGCAGAAGGGCAAACGCGCCACCGATCTTTCCGGCGGCTCCATCTCCGCCGAGAAAGTCCAAGACAACTACAAACAGTACTGGTCCTTCTTCCGCCGCCCAAAGGAGATCGAGACCGCCGACAAAGTCCCCGACTTCGTCGACACCTTCTACAATCTAGTCACAGACATCTACGAGTGGGGGTGGGGCCAGTCCTTCCACTTCTCCCCCTCCATCCCCGGCAAGTCCCACCGCGACGCCACGCGCCTCCACGAGGAGATGGCCGTCGATCTCATCGAGGCCAAGCCCGGCAACAGAATCCTGGATGTGGGCTGTGGCGTGGGCGGTCCCATGCGGGCCATCGCGGCCCACTCGCGGGCCAACGTAGTCGGCATCACCATCAACGAGTACCAGGTCAACCGCGCAAGGATGCACAACAAGAAGGCAGGGTTGGAGTCCCTCTGCGAGGTCGTGTGCGGGAATTTTCTCAAGATGCCCTTCCCCGACAACAGCTTCGACGGCGCGTACTCCATCGAGGCCACGTGTCACGCGCCGAAGCTGGAGGAAGTGTACGCCGAAATCTTCCGTGTTCTGAAACCGGGGGCGCTCTATGTTTCCTACGAGTGGGTGACGACGGATAAGTACCGAGGCGATGACCCTGAACACGTGGAGGTCATTCAGGGGATTGAGAGGGGGGACGCGTTGCCTGGCCTTAGAAACTACACCGACATAGCCGAGACGGCGCGTAAGGTAGGGTTTGCTGTTGTGAAGGAGCGGGATCTGGCTAAGCCGCCGGCTCAGCCATGGTGGAGCCGATTGAAGATGGGTAGGATCGCCTACTGGCGGAACCATATTGTGGTCACTGTTCTCGCCGCTTTGGGAATCGCGCCCAAGGGGACCGTCGATGTTCATGAGATGCTCTTCAAGACCGCTGACTATTTGACCAGAGGGGGTGACTCTGGCATTTTCTCGCCGATGCACATGATCCTCTGCAGAAAGCCCCATGACAAGGACGACCATAACTGA
Predicted protein sequences of Glyma.04g020600
>Glyma.04g020600.1.p sequence-type=predicted peptide transcript=Glyma.04g020600.1 locus=Glyma.04g020600 id=Glyma.04g020600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPLSLFCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETADKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHRDATRLHEEMAVDLIEAKPGNRILDVGCGVGGPMRAIAAHSRANVVGITINEYQVNRARMHNKKAGLESLCEVVCGNFLKMPFPDNSFDGAYSIEATCHAPKLEEVYAEIFRVLKPGALYVSYEWVTTDKYRGDDPEHVEVIQGIERGDALPGLRNYTDIAETARKVGFAVVKERDLAKPPAQPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPHDKDDHN*






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