Report for Sequence Feature Glyma.04g018500
| Feature Type: | gene_model |
| Chromosome: | Gm04 |
| Start: | 1443654 |
| stop: | 1449265 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.04g018500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT1G20540.1 | AT |
|
JGI | N/A | IEA |
| KOG1007 |
KOG |
WD repeat protein TSSC1, WD repeat superfamily |
JGI | N/A | IEA |
| PTHR14205 | PantherFam |
WD-REPEAT PROTEIN |
JGI | N/A | IEA |
| PTHR14205:SF15 | PantherFam |
EARP AND GARP COMPLEX-INTERACTING PROTEIN 1 |
JGI | N/A | IEA |
Gene model name correspondences to Glyma.04g018500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma04g02030 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.04g018500
>Glyma.04g018500.1 sequence-type=CDS polypeptide=Glyma.04g018500.1.p locus=Glyma.04g018500 id=Glyma.04g018500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAAGCTGCATCTTCAGGCATCGGATACGGTCTAAAATATCAGGCTAGATGCATATCCGATGTGAAGGCAGACACAGATCACACTAGCTTCCTCGCTGGCACTCTCAGCCTCAAAGAAGAAAATGAGGTACATCTGATTCGGCTTTCGTCGAGTGGAACCGAACTCTTCTGCGAGGGATTGTTCTCTCATCCCAACGAGATCTGGGACCTTGTTTCTTGCCCCTTTGATCAACGGATCTTTTCAACCGTCTACTCTAACGGTGAAACGTATGGGGCAGCAATATGGCAGATCCCCGAGCTATATGGCGAGTTAAATTCACCTCAGCTAGAGAGAATTACCTCCCTCGACACTGATTCTGGCAAGATTAAATGTATTCTATGGTGGCCATCTGGAAGGCATGATAAATTGATCAGCATCAATGAGGAAAACCTGTACTTGTGGAATTTAGATGTTTCAAAGAAAACTGCTCAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGGATCCACATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCGTATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATGTCAATCGAGTGTTCCCATGTATGCAGTGTTGATTACCATCCCCAAAAGCAGCACATACTTGTTACTGCAGAACATGAGTCTGGGATACACATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACTTGGACTGTCAAGTGTAACCCAGAGTATGATGGAATGATCTTGAGTGCTGGTACGGATTCAACTGTCAACTTGTGGCTTGCCTCAACAAATCATGATGAGTTAACAACTGAAAGACAAGTCGATTCATCTGCCCGATGGGTTGATCCATTGCTTAATACGTACAGTGATTATGAAGACAGCATTTATGGGCTCACATGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAGAATCAGTTAAGCCTTTCATCTCCAAAAAATAA
>Glyma.04g018500.2 sequence-type=CDS polypeptide=Glyma.04g018500.2.p locus=Glyma.04g018500 id=Glyma.04g018500.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAAGCTGCATCTTCAGGCATCGGATACGGTCTAAAATATCAGGCTAGATGCATATCCGATGTGAAGGCAGACACAGATCACACTAGCTTCCTCGCTGGCACTCTCAGCCTCAAAGAAGAAAATGAGGTACATCTGATTCGGCTTTCGTCGAGTGGAACCGAACTCTTCTGCGAGGGATTGTTCTCTCATCCCAACGAGATCTGGGACCTTGTTTCTTGCCCCTTTGATCAACGGATCTTTTCAACCGTCTACTCTAACGGTGAAACGTATGGGGCAGCAATATGGCAGATCCCCGAGCTATATGGCGAGTTAAATTCACCTCAGCTAGAGAGAATTACCTCCCTCGACACTGATTCTGGCAAGATTAAATGTATTCTATGGTGGCCATCTGGAAGGCATGATAAATTGATCAGCATCAATGAGGAAAACCTGTACTTGTGGAATTTAGATGTTTCAAAGAAAACTGCTCAGGTACAATCACAAGATTCAGCTGGTATGCTGCACAAGTTATCTGGAGGGGCATGGGATCCACATGATGTGAGTTCTGTTGCTGCAACTTGTGAATCGTATCTCCAATTTTGGGATGTCAGAACAATGAAGAAGACTATGTCAATCGAGTGTTCCCATGTATGCAGTGTTGATTACCATCCCCAAAAGCAGCACATACTTGTTACTGCAGAACATGAGTCTGGGATACACATTTGGGATCTAAGAAAACCTAAAGTTCCCATCCAAGAGCTTCCAGGACATACTCATTGGACTTGGACTGTCAAGTGTAACCCAGAGTATGATGGAATGATCTTGAGTGCTGGTACGGATTCAACTGTCAACTTGTGGCTTGCCTCAACAAATCATGATGAGTTAACAACTGAAAGACAAGTCGATTCATCTGCCCGATGGGTTGATCCATTGCTTAATACGTACAGTGATTATGAAGACAGCATTTATGGTAAAGAGGGCTCACATGGAGTTCTCGTGAACCATGGATCTTTGCATCATTATCCTATGATGGCAGGGTTGTTGTAG
Predicted protein sequences of Glyma.04g018500
>Glyma.04g018500.1.p sequence-type=predicted peptide transcript=Glyma.04g018500.1 locus=Glyma.04g018500 id=Glyma.04g018500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLISINEENLYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESYLQFWDVRTMKKTMSIECSHVCSVDYHPQKQHILVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTDSTVNLWLASTNHDELTTERQVDSSARWVDPLLNTYSDYEDSIYGLTWSSREPWIFASLSYDGRVVVESVKPFISKK*
>Glyma.04g018500.2.p sequence-type=predicted peptide transcript=Glyma.04g018500.2 locus=Glyma.04g018500 id=Glyma.04g018500.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQAASSGIGYGLKYQARCISDVKADTDHTSFLAGTLSLKEENEVHLIRLSSSGTELFCEGLFSHPNEIWDLVSCPFDQRIFSTVYSNGETYGAAIWQIPELYGELNSPQLERITSLDTDSGKIKCILWWPSGRHDKLISINEENLYLWNLDVSKKTAQVQSQDSAGMLHKLSGGAWDPHDVSSVAATCESYLQFWDVRTMKKTMSIECSHVCSVDYHPQKQHILVTAEHESGIHIWDLRKPKVPIQELPGHTHWTWTVKCNPEYDGMILSAGTDSTVNLWLASTNHDELTTERQVDSSARWVDPLLNTYSDYEDSIYGKEGSHGVLVNHGSLHHYPMMAGLL*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
