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Report for Sequence Feature Glyma.04g016000

Feature Type:gene_model
Chromosome:Gm04
Start:1212369
stop:1217101
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g016000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G42540.1AT ATGLR3.3,GLR3.3 JGI N/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0004970GO-mf ionotropic glutamate receptor activity JGI N/AIEA
K05387KEGG Ion channels JGI N/AIEA
KOG1052 KOG Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits JGI N/AIEA
PTHR18966PantherFam IONOTROPIC GLUTAMATE RECEPTOR JGI N/AIEA
PF00060Pfam Ligand-gated ion channel JGI N/AIEA
PF00497Pfam Bacterial extracellular solute-binding proteins, family 3 JGI N/AIEA
PF13458Pfam Periplasmic binding protein JGI N/AIEA

Gene model name correspondences to Glyma.04g016000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g01760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g016000
>Glyma.04g016000.1 sequence-type=CDS polypeptide=Glyma.04g016000.1.p locus=Glyma.04g016000 id=Glyma.04g016000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATTTGTTCTGGGTTGTTTGTTGGGTGGTGTCGTGTTTGGGAGTATCATCAGTAACTCCTTTTGTGGCGGCTGCAAATTTGTCATCCTCAAGACCCGCCTTTGTGCACATTGGAGCAATCTTCAGCATGGATTCTGTTCTTGGGAAAGTCGCTAAAATTACATTGGAGGAAGCCGTCAAAGATGTAAACGCCGACAAAACCATTCTACATGGAACTCAACTTGTTCTCTCTATGCAAAATTCCAATCACAGTGGTTTCGTAGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGATTGCTATAATAGGGCCACAATCTTCTGTGACTGCCCACATAATATCCCATGTTGCAAATGAACTCCGGGTTCCTTTAGTGTCATTTGCGGCTACAGACCCCACCCTTTCATCGCTGCAGTTCCCTTTCTTTGTGAGGACAACACAGAGTGATTTGTACCAAATGAAGGCAGTTGCTGAAATTATTGATTATTATGGTTGGAAGGAGGTGATTGCCATATATGTGGATGATGATTATGGGCGAAATGGCGTGGCCGCATTGGATGATGAACTAGCTTCAAGGCGTTGTAGAATCTCCTTCAAAGAAGGAATTAAATCAGGAACCAAAGTTGACCGGGGTGAAATTACAAGTTTACTTGTGAAAGTGGCACTGATGCAATCTCGGGTCATTGTTCTCCATGCACAAACTGATTCTGGATTTATGATTTTCAATTTGGCGCGTTATCTTGGGATGACAGACAATGGCTATGTGTGGATAGTCACAGACTGGCTCTCTTCTTTTCTGGATTCCTCTTCTCTCCCTTCAGAGACAATGGATGTTCTCCAAGGAGTGCTTGTTTTGCGCCAGCATACACCTGATTCGGATAGAAAAAGGGCATTTCTCTCTAGGTGGAAGAAGTTAACTGGTGGCTCTTTGGGGTTACATTCTTATGGCCTCTATGCTTATGATTCTGTTTGGCTAGTTGCACGGGCTATTGATGCTTTTTTCAGTCAGGGTGGGATTGTTTCGTGTACCAATTACACAAGTTTAGGTGGTGATAAGGGAGGTGATCTTAACCTTGATGCAATGAGCATTTTTGACAATGGAACTCTTCTGTTGAAGAACATATTGCAGAGTGACTTTGTTGGATTATCAGGTCAAATGAAATTTGAACCAGACCGGTCTCTTGTTCATCCTGCCTATGACGTCCTTAATGTGGTTGGAAATGGCCTTAGGAGGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCAATTGTATCTCCTGAGATATTCTATGCAAAGCCACCTAATAGATCAAGTGCAAATCAGAAGCTATACAGTGTGATATGGCCTGGAGAAACATTATCTAAACCTCGTGGGTGGGTCTTCCCAAACAATGGTAGACAATTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCGTGAATTTGTGGCACCGGTGCAGGGAACAGAGATGTTTAAAGGTTTCTGTGTTGATGTATTCACAGCAGCAGTAAACTTGTTGCCTTATGCTGTTCCTTACCGTTTCGTCCCATTTGGAGACGGCCACAAAAATCCAAGCTACACACAACTTGTCAACTTAATCACAACTGGTTACTTTGATGGCGCCATTGGTGACATTGCTATTGTCACAAACCGGACAAGGATTGTAGATTTTACACAGCCATATGCTGCGTCTGGACTTGTTGTGGTGGCCCCTTTCAAGAAAATCAATTCTGGTGGTTGGTCTTTCTTGCAGCCATTTACTCCTCTTATGTGGATTGTGACTGGTTGTTTATTCCTTTTCATTGGGATAGTTGTATGGATTCTGGAACACAGGATAAATGATGAGTTCAGGGGTCCACCTAGGCAGCAAATTATAACCATGTTGTGGTTTAGCCTATCAACTCTGTTTTTTTCCCACAGAGAGAATACCATGAGTTCTCTTGGTCGGTTGGTGATGCTCATATGGTTATTTGTGGTTTTGATCCTCACTTCCAGCTACACTGCAAGTTTAACATCCATACTCACAGTGCAGCAGTTATATTCTCCTATCAGTGGAATAGAGAGCTTAAAAGCTAGTGACGAACCTATAGGGTTCCCAGTGGGTTCATTTGCAGAACATTACTTGATTCAAGATTTAGGAATAGCCAAATCTAGGCTTATTCCACTTGGATCTCCAGAAGAATATGCTAAGGCACTCCAGCTTGGTCCTAAAAGAGGAGGAGTTGCTGCTATTGTTGATGAACGACCCTATGTCGAAATCTTCTTATCAAGCCAGTGCACATTCAGGATTGTAGGTCAGGAGTTCACCAGAAGTGGCTGGGGTTTTGCATTCCCTAGGGACTCTCCTTTGGCTGTAGACATGTCAACTGCCATTCTACAGCTTTCTGAAACTGGTGATCTACAGCGGATTCATGATAAGTGGATGACACGAAGCTCTTGTAGTTTAGAGAATGCTGAAATTGATTCAGATCGTCTTCAGCTTAAAAGCTTCTGGGGTCTCTTTCTCATTTGCGGGATAGCTTGCTTTATTGCTCTTGTTTTGCATTTTATGCAGCTTATGTTCCAGTTATGGCAATCTCCTCCTTCTGAACCTGCTTCTAGTGCTAGCTCAATTTCTGGTCGTTTTCAAAGATTTCTTACACTCATTGATGAGAAGGAAGATCCATCTAAGAGTAAAGGAAGAAAGAGGAATGGAGATGAAAGATCGCTTGAAGATCAACTGGGAAGGCAGCCAAAGAGGGTACAGACAGAAATAAAGTTTTCCACATAG

>Glyma.04g016000.2 sequence-type=CDS polypeptide=Glyma.04g016000.2.p locus=Glyma.04g016000 id=Glyma.04g016000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAATTTGTTCTGGGTTGTTTGTTGGGTGGTGTCGTGTTTGGGAGTATCATCAGTAACTCCTTTTGTGGCGGCTGCAAATTTGTCATCCTCAAGACCCGCCTTTGTGCACATTGGAGCAATCTTCAGCATGGATTCTGTTCTTGGGAAAGTCGCTAAAATTACATTGGAGGAAGCCGTCAAAGATGTAAACGCCGACAAAACCATTCTACATGGAACTCAACTTGTTCTCTCTATGCAAAATTCCAATCACAGTGGTTTCGTAGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGATTGCTATAATAGGGCCACAATCTTCTGTGACTGCCCACATAATATCCCATGTTGCAAATGAACTCCGGGTTCCTTTAGTGTCATTTGCGGCTACAGACCCCACCCTTTCATCGCTGCAGTTCCCTTTCTTTGTGAGGACAACACAGAGTGATTTGTACCAAATGAAGGCAGTTGCTGAAATTATTGATTATTATGGTTGGAAGGAGGTGATTGCCATATATGTGGATGATGATTATGGGCGAAATGGCGTGGCCGCATTGGATGATGAACTAGCTTCAAGGCGTTGTAGAATCTCCTTCAAAGAAGGAATTAAATCAGGAACCAAAGTTGACCGGGGTGAAATTACAAGTTTACTTGTGAAAGTGGCACTGATGCAATCTCGGGTCATTGTTCTCCATGCACAAACTGATTCTGGATTTATGATTTTCAATTTGGCGCGTTATCTTGGGATGACAGACAATGGCTATGTGTGGATAGTCACAGACTGGCTCTCTTCTTTTCTGGATTCCTCTTCTCTCCCTTCAGAGACAATGGATGTTCTCCAAGGAGTGCTTGTTTTGCGCCAGCATACACCTGATTCGGATAGAAAAAGGGCATTTCTCTCTAGGTGGAAGAAGTTAACTGGTGGCTCTTTGGGGTTACATTCTTATGGCCTCTATGCTTATGATTCTGTTTGGCTAGTTGCACGGGCTATTGATGCTTTTTTCAGTCAGGGTGGGATTGTTTCGTGTACCAATTACACAAGTTTAGGTGGTGATAAGGGAGGTGATCTTAACCTTGATGCAATGAGCATTTTTGACAATGGAACTCTTCTGTTGAAGAACATATTGCAGAGTGACTTTGTTGGATTATCAGGTCAAATGAAATTTGAACCAGACCGGTCTCTTGTTCATCCTGCCTATGACGTCCTTAATGTGGTTGGAAATGGCCTTAGGAGGGTTGGTTACTGGTCCAACTATTCTGGTCTGTCAATTGTATCTCCTGAGATATTCTATGCAAAGCCACCTAATAGATCAAGTGCAAATCAGAAGCTATACAGTGTGATATGGCCTGGAGAAACATTATCTAAACCTCGTGGGTGGGTCTTCCCAAACAATGGTAGACAATTGAGAATTGGTGTGCCTATCCGAGTCAGTTACCGTGAATTTGTGGCACCGGTGCAGGGAACAGAGATGTTTAAAGGTTTCTGTGTTGATGTATTCACAGCAGCAGTAAACTTGTTGCCTTATGCTGTTCCTTACCGTTTCGTCCCATTTGGAGACGGCCACAAAAATCCAAGCTACACACAACTTGTCAACTTAATCACAACTGGTGTAAATAATGCCTCATGA
Predicted protein sequences of Glyma.04g016000
>Glyma.04g016000.1.p sequence-type=predicted peptide transcript=Glyma.04g016000.1 locus=Glyma.04g016000 id=Glyma.04g016000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNLFWVVCWVVSCLGVSSVTPFVAAANLSSSRPAFVHIGAIFSMDSVLGKVAKITLEEAVKDVNADKTILHGTQLVLSMQNSNHSGFVGMVQALRFMETDVIAIIGPQSSVTAHIISHVANELRVPLVSFAATDPTLSSLQFPFFVRTTQSDLYQMKAVAEIIDYYGWKEVIAIYVDDDYGRNGVAALDDELASRRCRISFKEGIKSGTKVDRGEITSLLVKVALMQSRVIVLHAQTDSGFMIFNLARYLGMTDNGYVWIVTDWLSSFLDSSSLPSETMDVLQGVLVLRQHTPDSDRKRAFLSRWKKLTGGSLGLHSYGLYAYDSVWLVARAIDAFFSQGGIVSCTNYTSLGGDKGGDLNLDAMSIFDNGTLLLKNILQSDFVGLSGQMKFEPDRSLVHPAYDVLNVVGNGLRRVGYWSNYSGLSIVSPEIFYAKPPNRSSANQKLYSVIWPGETLSKPRGWVFPNNGRQLRIGVPIRVSYREFVAPVQGTEMFKGFCVDVFTAAVNLLPYAVPYRFVPFGDGHKNPSYTQLVNLITTGYFDGAIGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPLMWIVTGCLFLFIGIVVWILEHRINDEFRGPPRQQIITMLWFSLSTLFFSHRENTMSSLGRLVMLIWLFVVLILTSSYTASLTSILTVQQLYSPISGIESLKASDEPIGFPVGSFAEHYLIQDLGIAKSRLIPLGSPEEYAKALQLGPKRGGVAAIVDERPYVEIFLSSQCTFRIVGQEFTRSGWGFAFPRDSPLAVDMSTAILQLSETGDLQRIHDKWMTRSSCSLENAEIDSDRLQLKSFWGLFLICGIACFIALVLHFMQLMFQLWQSPPSEPASSASSISGRFQRFLTLIDEKEDPSKSKGRKRNGDERSLEDQLGRQPKRVQTEIKFST*

>Glyma.04g016000.2.p sequence-type=predicted peptide transcript=Glyma.04g016000.2 locus=Glyma.04g016000 id=Glyma.04g016000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNLFWVVCWVVSCLGVSSVTPFVAAANLSSSRPAFVHIGAIFSMDSVLGKVAKITLEEAVKDVNADKTILHGTQLVLSMQNSNHSGFVGMVQALRFMETDVIAIIGPQSSVTAHIISHVANELRVPLVSFAATDPTLSSLQFPFFVRTTQSDLYQMKAVAEIIDYYGWKEVIAIYVDDDYGRNGVAALDDELASRRCRISFKEGIKSGTKVDRGEITSLLVKVALMQSRVIVLHAQTDSGFMIFNLARYLGMTDNGYVWIVTDWLSSFLDSSSLPSETMDVLQGVLVLRQHTPDSDRKRAFLSRWKKLTGGSLGLHSYGLYAYDSVWLVARAIDAFFSQGGIVSCTNYTSLGGDKGGDLNLDAMSIFDNGTLLLKNILQSDFVGLSGQMKFEPDRSLVHPAYDVLNVVGNGLRRVGYWSNYSGLSIVSPEIFYAKPPNRSSANQKLYSVIWPGETLSKPRGWVFPNNGRQLRIGVPIRVSYREFVAPVQGTEMFKGFCVDVFTAAVNLLPYAVPYRFVPFGDGHKNPSYTQLVNLITTGVNNAS*






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