SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.04g004800

Feature Type:gene_model
Chromosome:Gm04
Start:410782
stop:416227
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g004800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G21050.1AT LAX2 JGI N/AIEA
K13946KEGG Plant hormone signal transduction JGI N/AIEA
KOG1303 KOG Amino acid transporters JGI N/AIEA
PTHR22950PantherFam AMINO ACID TRANSPORTER JGI N/AIEA
PF01490Pfam Transmembrane amino acid transporter protein JGI N/AIEA

Proteins Associated with Glyma.04g004800
LocusGene SymbolProtein Name
LAX5 auxin transporter-like protein 5

Gene model name correspondences to Glyma.04g004800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g00640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g004800
>Glyma.04g004800.1 sequence-type=CDS polypeptide=Glyma.04g004800.1.p locus=Glyma.04g004800 id=Glyma.04g004800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAAATGGAAAGTGAAGGGAAGCCTAGGGATGCAAAATCCAGGTTATTAAGTTTCTTGTGGCATGGGGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTAACGTTGCCATACTCTTTTTCCCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACGGCTTGCTGGGTGGCTGGACTGCTTACCTCATTAGCACACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAATTTCAGGAACCATGTCATTCAGTGGTTTGAGGTTCTTGATGGGCTCCTCGGGAAACACTGGAGAAACGTGGGCTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATCCAACTCATAGCTTGCGCAAGCAACATATATTACATAAATGATAATTTGGATAAGAGGACTTGGACTTATATCTTTGGAGCATGTTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCGGGCCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAATTCAAGGCCATATACTTACTGGCTACCCTGTATGTGATGACATTGACTCTCCCATCGGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTTCTCTGCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTCTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCAAGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATACACGAGTGTAGGAGCCTGTGCAAGCGTGCATTGGCGAGATTGCCAGTGGTGATCCCAATATGGTTTTTGGCCATAGTTTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTTCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCACCCGCTGCCCGACGGAATGCGGTGGAGCAACCTCCGAGGTCGGTGGGAAGATGGGTGGGTGCGTACACCATGAACGTATTTGTGGTGGTGTGGGTTCTAGTGGTAGGCTTTGGATTCGGAGGATGGGCGAGTATGGTCAACTTCATACACCAGATTGACACATTCGGTTTCTTCACCAAATGTTACCAATGCCCCACACCCACTTCCATCAACTCAACCGCGCCTTCCCCTCGTGCTCACTAA

>Glyma.04g004800.2 sequence-type=CDS polypeptide=Glyma.04g004800.2.p locus=Glyma.04g004800 id=Glyma.04g004800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAAATGGAAAGTGAAGGGAAGCCTAGGGATGCAAAATCCAGGTTATTAAGTTTCTTGTGGCATGGGGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACGGCTTGCTGGGTGGCTGGACTGCTTACCTCATTAGCACACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAATTTCAGGAACCATGTCATTCAGTGGTTTGAGGTTCTTGATGGGCTCCTCGGGAAACACTGGAGAAACGTGGGCTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATCCAACTCATAGCTTGCGCAAGCAACATATATTACATAAATGATAATTTGGATAAGAGGACTTGGACTTATATCTTTGGAGCATGTTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCGGGCCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAATTCAAGGCCATATACTTACTGGCTACCCTGTATGTGATGACATTGACTCTCCCATCGGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTTCTCTGCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTCTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCAAGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATACACGAGTGTAGGAGCCTGTGCAAGCGTGCATTGGCGAGATTGCCAGTGGTGATCCCAATATGGTTTTTGGCCATAGTTTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTTCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCACCCGCTGCCCGACGGAATGCGGTGGAGCAACCTCCGAGGTCGGTGGGAAGATGGGTGGGTGCGTACACCATGAACGTATTTGTGGTGGTGTGGGTTCTAGTGGTAGGCTTTGGATTCGGAGGATGGGCGAGTATGGTCAACTTCATACACCAGATTGACACATTCGGTTTCTTCACCAAATGTTACCAATGCCCCACACCCACTTCCATCAACTCAACCGCGCCTTCCCCTCGTGCTCACTAA

>Glyma.04g004800.3 sequence-type=CDS polypeptide=Glyma.04g004800.3.p locus=Glyma.04g004800 id=Glyma.04g004800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCATCGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAAATGGAAAGTGAAGGGAAGCCTAGGGATGCAAAATCCAGGTTATTAAGTTTCTTGTGGCATGGGGGTTCTGTTTATGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTAACGTTGCCATACTCTTTTTCCCAGCTGGGAATGCTTTCTGGCACTCTTTTTCAACTCTTCTACGGCTTGCTGGGTGGCTGGACTGCTTACCTCATTAGCACACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAGAAATTTAATTTCAGGAACCATGTCATTCAGTGGTTTGAGGTTCTTGATGGGCTCCTCGGGAAACACTGGAGAAACGTGGGCTTGGCCTTCAACTGCACATTTCTTCTATTTGGATCTGTTATCCAACTCATAGCTTGCGCAAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACTTACACTGCTTGGTACCTCACAGTTGCCTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCGGGCCCGACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTTGGGGGACATGCCGTTACTGTGGAGATAATGCACGCGATGTGGAAACCTCAAAAATTCAAGGCCATATACTTACTGGCTACCCTGTATGTGATGACATTGACTCTCCCATCGGCAGCTGCAGTATACTGGGCATTTGGAGACATGCTTCTAAATCACTCCAATGCTTTTTCTCTGCTTCCAAGGTCACCCTTCCGTGACATGGCTGTCATTCTAATGCTCATCCACCAGTTTATAACATTTGGGTTTGCAAGCACGCCACTATATTTGGTGTGGGAGAAAGCAATAGGGATACACGAGTGTAGGAGCCTGTGCAAGCGTGCATTGGCGAGATTGCCAGTGGTGATCCCAATATGGTTTTTGGCCATAGTTTTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGATCTCTTCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCCCACATGTTCACCTTCAAATCACCCGCTGCCCGACGGAATGCGGTGGAGCAACCTCCGAGGTCGGTGGGAAGATGGGTGGGTGCGTACACCATGAACGTATTTGTGGTGGTGTGGGTTCTAGTGGTAGGCTTTGGATTCGGAGGATGGGCGAGTATGGTCAACTTCATACACCAGATTGACACATTCGGTTTCTTCACCAAATGTTACCAATGCCCCACACCCACTTCCATCAACTCAACCGCGCCTTCCCCTCGTGCTCACTAA
Predicted protein sequences of Glyma.04g004800
>Glyma.04g004800.1.p sequence-type=predicted peptide transcript=Glyma.04g004800.1 locus=Glyma.04g004800 id=Glyma.04g004800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASEKEVETVIVGNYEEMESEGKPRDAKSRLLSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLLGGWTAYLISTLYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFASTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARRNAVEQPPRSVGRWVGAYTMNVFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPTPTSINSTAPSPRAH*

>Glyma.04g004800.2.p sequence-type=predicted peptide transcript=Glyma.04g004800.2 locus=Glyma.04g004800 id=Glyma.04g004800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASEKEVETVIVGNYEEMESEGKPRDAKSRLLSFLWHGGSVYDAWFSCASNQLGMLSGTLFQLFYGLLGGWTAYLISTLYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFASTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARRNAVEQPPRSVGRWVGAYTMNVFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPTPTSINSTAPSPRAH*

>Glyma.04g004800.3.p sequence-type=predicted peptide transcript=Glyma.04g004800.3 locus=Glyma.04g004800 id=Glyma.04g004800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASEKEVETVIVGNYEEMESEGKPRDAKSRLLSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLLGGWTAYLISTLYVEYRTRKEREKFNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACARIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVMTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFASTPLYLVWEKAIGIHECRSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFTFKSPAARRNAVEQPPRSVGRWVGAYTMNVFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPTPTSINSTAPSPRAH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo