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Report for Sequence Feature Glyma.04g002600

Feature Type:gene_model
Chromosome:Gm04
Start:211955
stop:215777
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.04g002600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G06980.1AT JGI N/AIEA
3.6.4.13EC RNA helicase JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
K13179KEGG Ribosome biogenesis JGI N/AIEA
KOG0331 KOG ATP-dependent RNA helicase JGI N/AIEA
PTHR24031PantherFam RNA HELICASE JGI N/AIEA
PF00270Pfam DEAD/DEAH box helicase JGI N/AIEA
PF00271Pfam Helicase conserved C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.04g002600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma04g00390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.04g002600
>Glyma.04g002600.1 sequence-type=CDS polypeptide=Glyma.04g002600.1.p locus=Glyma.04g002600 id=Glyma.04g002600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGGTTGGGCAACTTGTTCCTTCGAATTTGTTCCTCAATCATTCTGCTGCTACAACACTCATACCCACTTCCACTCCCCCCAGACACAGACACCTTCTCTGTATTTCTTCTGCCAATCACACAACCGCAACCGATAACGATTCTCCATTCTCAAGTTTCGGAAGAGTGAAGACTCTCCTGGTCCACAGAAGAAGAAAGGACCAAAGCCATAGACGCGCCGTTCAACTTGAAGATGATAATGATGATGATATAGCCCCTAGACCCAGACGTTCTCAGTCTCGGTCACGAGGAGGAGAAAGATGGGATATGATTCCCAATTATACTCCACAAAGCAAATCAGCGACTGACACAAAGTTTTTCAGTCTAAAGTCCTTCAAAGAAATAGGTTGCAGTGAATATATGATTGAATCCCTCCAGAAACTCTTGTTGAGCCGGCCTTCCCATGTACAGGCCATGGCTTTTGCACCTGTTATTAGTGGAAAGACTTGTGTCATAGCTGACCAAAGTGGTTCTGGTAAGACATTAGCTTATCTCGCACCAATCATCCAGCTCCTTAGACTAGAAGAGCTTGAAGGACGTAGTAGTAAATCCTCTTCACAAGCTCCTAGAGTCCTTGTCCTCGCACCCACGGCTGAGTTGGCTTCTCAGGTCTTAGATAATTGCCGCTCCTTGTCTAAATCTGGAGTTCCATTCAAGTCTATGGTTGTCACCGGAGGTTTTCGCCAAAAAACTCAATTGGAAAATTTACAGCAGGGAGTTGATGTCTTAATAGCTACACCTGGCCGTTTCTTGTTCCTCATCCATGAAGGCTTCTTGCAGTTAACAAATCTAAGATGTGCTATCTTGGATGAGGTAGATATACTCTTTGGTGATGAGGACTTCGAAGTGGCTCTTCAATCCTTGATCAATTCTTCACCTGTAGACACACAGTATTTATTTGTGACTGCAACTTTACCAAAAAATGTTTACACCAAATTGGTTGAAGTTTTTCCTGATTGTGAAATGATTATGGGGCCTGGTATGCACCGAATAAGTTCTCGCCTTCAAGAGATTATAGTAGATTGCAGTGGAGAAGATGGACAAGAAAAAACTCCTGATACAGCATTTCTGAACAAGAAAACTGCACTTCTGCAGCTTGTGGAGGAAAATCCTGTCCCAAGAACTATTGTGTTCTGCAACAAAATTGAAACATGCAGAAAAGTTGAAAATTTGTTAAAGCGTTTTGATAGAAAAGGAAATCACGTGCAAGTTCTACCATTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGTATGGAAGAGTTTACACGTTCTCCATCAAAAGGAGTCTCCCAGTTTATGGTTTGCACCGACAGAGCATCACGGGGAATAGACTTCACAAGAGTGGATCATGTCATACTCTTTGACTTCCCACGTGATCCAAGTGAATATGTACGGCGTGTTGGAAGAACAGCCAGAGGTGCCAAGGGAGTAGGCAAGGCATTTATCTTTGTGGTTGGCAAGCAAGTATCCCTTGCACGCAAAATAATGGAAAGAAATCAGAAGGGTCACCCACTACATGATGTGCCTTCGGCTTATTAG
Predicted protein sequences of Glyma.04g002600
>Glyma.04g002600.1.p sequence-type=predicted peptide transcript=Glyma.04g002600.1 locus=Glyma.04g002600 id=Glyma.04g002600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVGQLVPSNLFLNHSAATTLIPTSTPPRHRHLLCISSANHTTATDNDSPFSSFGRVKTLLVHRRRKDQSHRRAVQLEDDNDDDIAPRPRRSQSRSRGGERWDMIPNYTPQSKSATDTKFFSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGKTCVIADQSGSGKTLAYLAPIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQKTQLENLQQGVDVLIATPGRFLFLIHEGFLQLTNLRCAILDEVDILFGDEDFEVALQSLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGMHRISSRLQEIIVDCSGEDGQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKVENLLKRFDRKGNHVQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFTRVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY*






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