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Report for Sequence Feature Glyma.04G126900

Feature Type:gene_model
Chromosome:Gm04
Start:17096980
stop:17102005
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.04G126900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G36310.1AT uridine-ribohydrolase 1 JGI N/AIEA
GO:0006152GO-bp purine nucleoside catabolic process EnsemblGenomesN/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0008477GO-mf purine nucleosidase activity EnsemblGenomesN/AIEA
P165-PWYSoyCyc9 superpathway of purines degradation in plants Plant Metabolic Network ISS
PWY-5043SoyCyc9 purine nucleosides salvage II (plant) Plant Metabolic Network ISS
PWY-5044SoyCyc9 purine nucleotides degradation I (plants) Plant Metabolic Network ISS
PWY-6556SoyCyc9 pyrimidine ribonucleosides salvage II Plant Metabolic Network ISS
PWY-6595SoyCyc9 superpathway of guanosine nucleotides degradation (plants) Plant Metabolic Network ISS
PWY-6596SoyCyc9 adenosine nucleotides degradation I Plant Metabolic Network ISS
PWY-6605SoyCyc9 adenine and adenosine salvage II Plant Metabolic Network ISS
PWY-6607SoyCyc9 guanosine nucleotides degradation I Plant Metabolic Network ISS
PWY-7196SoyCyc9 superpathway of pyrimidine ribonucleosides salvage Plant Metabolic Network ISS
PWYQT-4445SoyCyc9 pyrimidine salvage pathway Plant Metabolic Network ISS
GN7V-65024SoyCyc9-rxn uridine nucleosidase Plant Metabolic Network ISS

Expression Patterns of Glyma.04G126900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.04G126900 not represented in the dataset
Glyma.04G126900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.04G126900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.04g126900 Wm82.a4.v1ISS As supplied by JGI


Transcripts of Glyma.04G126900
>Glyma.04g126900.2 sequence-type=transcript locus=Glyma.04g126900 ID=Glyma.04g126900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTGATTATTCCTGTGTGTATTGAATCTGAACATTTTATTACTATACATTCCGTGGATATACTGGCCTTGTTTTTGGTGTTCTGCTGACTTTATATTTTTAGTATATTTATCCTTATTTGGTAGTTTAAAAAAAATTGGTTAAAGTGTAGATAGGGTTTGTGTGTGAATTTAATTTTGTTGATTCTTTAAGGGTGAATGAATATTGATTGTCTTCATGGACAAGTATAGTTGTTTACAAGTAGATGCCAGGGACCGAGCGAAATGGATCTTCTGACCTGTAGCCCAATGTTCAAGATATATAATGTTACTTTATGATGGAAGTGGGCACGTGCATGCAAAAAGTGCAGTGTGAGATCGCAGGCCATGAAAATATTCCAGTTGCACAGGGAAGCCCTGAGCCGTTGAAGGGTGGAATGCCTTGTGTTGCTGATTTTGTTCATGGTAAAGATGGACTAGGGAACACATTCCTACCCTCACCTAAAGGCAATCAATGGAGATTCTACGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCAAATGTGTTGCAACACGTTCTGGAGGTAGCAGGTAGCTGGTTCTATTTTTTCTCTTGGCAAGCTGAAACTCTGTTACTGGCGGTTTTTATAACATGGAG
Coding sequences of Glyma.04G126900
>Glyma.04g126900.1 sequence-type=CDS polypeptide=Glyma.04g126900.1.p locus=Glyma.04g126900 ID=Glyma.04g126900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGGAAGTGGGCACGTGCATGCAAAAAGTGCAGTGTGAGATCGCAGGCCATGAAAATATTCCAGTTGCACAGGGAAGCCCTGAGCCGTTGAAGGGTGGAATGCCTTGTGTTGCTGATTTTGTTCATGGTAAAGATGGACTAGGGAACACATTCCTACCCTCACCTAAAGGCAATCAATGGAGATTCTACGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCAAATGTAAGTGGTGGTTTCTGTTAGTTGAGTTTCTTTGA

>Glyma.04g126900.2 sequence-type=CDS polypeptide=Glyma.04g126900.2.p locus=Glyma.04g126900 ID=Glyma.04g126900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGGAAGTGGGCACGTGCATGCAAAAAGTGCAGTGTGAGATCGCAGGCCATGAAAATATTCCAGTTGCACAGGGAAGCCCTGAGCCGTTGAAGGGTGGAATGCCTTGTGTTGCTGATTTTGTTCATGGTAAAGATGGACTAGGGAACACATTCCTACCCTCACCTAAAGGCAATCAATGGAGATTCTACGTTTGCAAGCAAAGTGAAGAGAATAGTTATACTTGGTGGTGCATTCTTTGCCTTGGGGAATGTGAATCCTGCTGCAGAAGCAAATGTGTTGCAACACGTTCTGGAGGTAGCAGGTAG
Predicted protein sequences of Glyma.04G126900
>Glyma.04g126900.1.p sequence-type=predicted peptide transcript=Glyma.04g126900.1 locus=Glyma.04g126900 ID=Glyma.04g126900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMEVGTCMQKVQCEIAGHENIPVAQGSPEPLKGGMPCVADFVHGKDGLGNTFLPSPKGNQWRFYVCKQSEENSYTWWCILCLGECESCCRSKCKWWFLLVEFL*

>Glyma.04g126900.2.p sequence-type=predicted peptide transcript=Glyma.04g126900.2 locus=Glyma.04g126900 ID=Glyma.04g126900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMEVGTCMQKVQCEIAGHENIPVAQGSPEPLKGGMPCVADFVHGKDGLGNTFLPSPKGNQWRFYVCKQSEENSYTWWCILCLGECESCCRSKCVATRSGGSR*






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