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Report for Sequence Feature Glyma.03g264600

Feature Type:gene_model
Chromosome:Gm03
Start:45750892
stop:45759815
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g264600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G43970.1AT RNA-binding protein JGI N/AIEA
AT3G19090.1AT RNA-binding protein JGI N/AIEA
GO:0006396GO-bp RNA processing EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus EnsemblGenomesN/AIEA
GO:1990904GO-cc ribonucleoprotein complex EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0003723GO-mf RNA binding EnsemblGenomesN/AIEA
KOG1855 KOG Predicted RNA-binding protein JGI N/AIEA
PTHR22792Panther LUPUS LA PROTEIN-RELATED JGI N/AIEA
PTHR22792:SF37Panther JGI N/AIEA
PF05383PFAM La domain JGI N/AIEA
PF07145PFAM Ataxin-2 C-terminal region JGI N/AIEA

Expression Patterns of Glyma.03g264600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g264600 not represented in the dataset
Glyma.03g264600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.03g264600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g42541 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.03g264600
>Glyma.03g264600.2 sequence-type=transcript locus=Glyma.03g264600 ID=Glyma.03g264600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAGACACCGATTTAGGGGTTAAAAAATATCGATTAACCTCTGATATTTCTCTTAGCTGCAGCCTGCAGTGAGACTAAGAAAATCTCCGAACCCGCTACTTCCTATTTTCTATCCTTTCAAAAGAGAAACTGGAAAAGTTAGCTAAACGTCATAGCTAGATCGTCGAACAAAACGAAAAGAAAAGCGTTGAAAATGGCTCAGGAGTCACTCTCAGAAACCCCTGATATCTCGCCCCCTTCGTCTACTGCACAATCGCTGCCAGATCCATCTCTTTCAAGGAACGTTTCTTTTAGCCGGCTCAACGCACAGGCACCAGAATTTGTGCCCACTCGCGTCTCCCCACGGGGCGATTTTCAGCAACCTAGGCTCGTTGTACCTTctccttctccttctcctcctcctcctcctcctcctcctcctcctGCGTCAGGTATGGTACACGTTTACTCACCGCCCCCAACTTCACAGTTCCATGTACCGATTCAAGGCCATGTCGTCCCGGTCCAGAATCACCACCACCATCTTGCCCATCAGCACCACGTTCCGGCTCACTACCGCTCTCATCATCACCCGCATCAGTATTATGTTAGCTCCGATTCTGCCGTGCAGCAGCCTCAAGTTGACCCAGATCATGCTCCTTCCAAAAGCAAGATGTCTGACGAAGCCAGTCAGAAAATTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTAGCTACTACCGATCATTTGATGAGGTTCATCAACAAAGATCCAGAAGGTTTTGTGCCTATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCATAGCCAGTCACTCCCAACTTGCAACTGTTTTAAGGAACTCGTCAAAGCTCGTGGTCAGTGAAGACGGAAAGAAAATCAAACGCCAGTATCCCCTGACTGAGTCTGATATAGAAGAGCTACAATCTCGCATTGTTGTAGCTGAAAACCTACCTGAGGATCACTGCCATCAGAATCTTATGAAGGTTTTCTCAGCAGTTGGGAGTGTGAAGACTATCCGTACCTGTCCACCTCAAACTTCCAATAGTGGGGCTTCTGCTACTTCAAGATTGGGAAAAGTTGATGGGATGCCTTTATCTAACAAGTTGCATGCATTTGTTGAATATGGATCTGTTGAGCTGGCTGAGAGAGCTGTTGCTGAGCTGAATGATGAGGGAAACTGGCGGAGTGGCCTCCGGATTCGCCTGATGCTTAGACGCATGTCTAAACCTGCTCAAGGACGGGGAAAGAAGGGACTTGATGTTGAAGTTGGCTGTGATGAGGATTATACTTCTGTGCCTGAGCCACAGGCAAGTGAGAAACAATTAGAAGATGCTTCCTTTCCTGATACTTTGCTGCTTGAACATGCGGGAGAAGAGCATGGTTATGACAAAGAGAGTGGGCAAAGGAAAGGTCGTAGCCGGGGCCGGGGTAAGGGACGTGGCCGAGTTCATTGTCATCAGAATAATCGTGTGGGAACACCCCCTTCAAATAATACAATTTTCACTGATCAAGTCATTGCCAAGCAACCCCCTGGGCCCCGAATGCCGGATGGTACAAGAGGATTTTCAATGGGTAGGGGGAAGCCGGTTGCTGTTAATATAGCGTAATTTGTTTGATCAAATGCCGATACAAGTTTGTAGTTGTGCTTGTAGCGAGTATATGTTGGTGCTGTAACAGTGTGATTGTGACAGTACTAGTCTGGCTGGGGCAATTCTAAAACAGTCTTCTGTTTTTTTCTTTTTTGTCTTTTGGAGATGCTGTGGCCTATGGCTAACAGCGGAGAAAGTAGAAAAAAGAAATTTAAGGATTGACCAGAGTGATTAATTGATTCAAATCAATCCGAACAGTTTAGATTTATAGATCAAAATCGTTCATGTAGGAGTTGTATCATGAGTTTAGATTTATAGATCAATTAACCCATTGATTTGATCCTT

>Glyma.03g264600.3 sequence-type=transcript locus=Glyma.03g264600 ID=Glyma.03g264600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAGACACCGATTTAGGGGTTAAAAAATATCGATTAACCTCTGATATTTCTCTTAGCTGCAGCCTGCAGTGAGACTAAGAAAATCTCCGAACCCGCTACTTCCTATTTTCTATCCTTTCAAAAGAGAAACTGGAAAAGTTAGCTAAACGTCATAGCTAGATCGTCGAACAAAACGAAAAGAAAAGCGTTGAAAATGGCTCAGGAGTCACTCTCAGAAACCCCTGATATCTCGCCCCCTTCGTCTACTGCACAATCGCTGCCAGATCCATCTCTTTCAAGGAACGTTTCTTTTAGCCGGCTCAACGCACAGGCACCAGAATTTGTGCCCACTCGCGTCTCCCCACGGGGCGATTTTCAGCAACCTAGGCTCGTTGTACCTTctccttctccttctcctcctcctcctcctcctcctcctcctcctGCGTCAGGTATGGTACACGTTTACTCACCGCCCCCAACTTCACAGTTCCATGTACCGATTCAAGGCCATGTCGTCCCGGTCCAGAATCACCACCACCATCTTGCCCATCAGCACCACGTTCCGGCTCACTACCGCTCTCATCATCACCCGCATCAGTATTATGTTAGCTCCGATTCTGCCGTGCAGCAGCCTCAAGTTGACCCAGATCATGCTCCTTCCAAAAGCAAGATGTCTGACGAAGCCAGTCAGAAAATTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTAGCTACTACCGATCATTTGATGAGGTTCATCAACAAAGATCCAGAAGGTTTTGTGCCTATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCATAGCCAGTCACTCCCAACTTGCAACTGTTTTAAGGAACTCGTCAAAGCTCGTGGTCAGTGAAGACGGAAAGAAAATCAAACGCCAGTATCCCCTGACTGAGTCTGATATAGAAGAGCTACAATCTCGCATTGTTGTAGCTGAAAACCTACCTGAGGATCACTGCCATCAGAATCTTATGAAGGTTTTCTCAGCAGTTGGGAGTGTGAAGACTATCCGTACCTGTCCACCTCAAACTTCCAATAGTGGGGCTTCTGCTACTTCAAGATTGGGAAAAGTTGATGGGATGCCTTTATCTAACAAGTTGCATGCATTTGTTGAATATGGATCTGTTGAGCTGGCTGAGAGAGCTGTTGCTGAGCTGAATGATGAGGGAAACTGGCGGAGTGGCCTCCGGATTCGCCTGATGCTTAGACGCATGTCTAAACCTGCTCAAGGACGGGGAAAGAAGGGACAGAGGGCCTCTAATAGAATGAGATAAGAATAGAGAGAGGAATGGTCAAATTTCTCATTACCCTGTTTTTGTTTTGCCAGACTTCTCCCAACAGAGCTTGTACTCTGAATTCAAGGACAGAGGGCCTCCAATAGAACGAGATAAGAATAGAGAGAGGAATGGTCTAATTTCTcattaccctgttttagctttgccagacttcccccaacagtttgtggtgcaaactgatgcttagggttttgcaatgggagcagtgctactccaatcaggctacccagtagcctatctcagGCACGATCCCTTTTAACAGAATTCTAACAAGAGCCTTCTAGAACTAGCTGAGTCACTCTCTCAATACAATTAACAGATATTCAAATAACTAATGATAAAGCACATAGTCATTCCACATCTTAGGTGTAGTAATAGTATGCTTGGGCCTAAGGTCCACTTCATTGGGCTGCTCCTTGTCACCATGCTGGACCATATCAGTTGTTTAGTTACATCTGTTATGTTAGTTAGGCTCTATATAAACAGAGCTTGTAATCATTCAACACTTTGGTTGAATAATAATATCTTCctcattctcaaactctctctctctctctctctcaatatcaAACTCTATTAAGGGGCATTCTGGAAGTTTTTAGACCT
Coding sequences of Glyma.03g264600
>Glyma.03g264600.1 sequence-type=CDS polypeptide=Glyma.03g264600.1.p locus=Glyma.03g264600 ID=Glyma.03g264600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCAGGAGTCACTCTCAGAAACCCCTGATATCTCGCCCCCTTCGTCTACTGCACAATCGCTGCCAGATCCATCTCTTTCAAGGAACGTTTCTTTTAGCCGGCTCAACGCACAGGCACCAGAATTTGTGCCCACTCGCGTCTCCCCACGGGGCGATTTTCAGCAACCTAGGCTCGTTGTACCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGTCAGGTATGGTACACGTTTACTCACCGCCCCCAACTTCACAGTTCCATGTACCGATTCAAGGCCATGTCGTCCCGGTCCAGAATCACCACCACCATCTTGCCCATCAGCACCACGTTCCGGCTCACTACCGCTCTCATCATCACCCGCATCAGTATTATGTTAGCTCCGATTCTGCCGTGCAGCAGCCTCAAGTTGACCCAGATCATGCTCCTTCCAAAAGCAAGATGTCTGACGAAGCCAGTCAGAAAATTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTAGCTACTACCGATCATTTGATGAGGTTCATCAACAAAGATCCAGAAGGTTTTGTGCCTATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCATAGCCAGTCACTCCCAACTTGCAACTGTTTTAAGGAACTCGTCAAAGCTCGTGGTCAGTGAAGACGGAAAGAAAATCAAACGCCAGTATCCCCTGACTGAGTCTGATATAGAAGAGCTACAATCTCGCATTGTTGTAGCTGAAAACCTACCTGAGGATCACTGCCATCAGAATCTTATGAAGGTTTTCTCAGCAGTTGGGAGTGTGAAGACTATCCGTACCTGTCCACCTCAAACTTCCAATAGTGGGGCTTCTGCTACTTCAAGATTGGGAAAAGTTGATGGGATGCCTTTATCTAACAAGTTGCATGCATTTGTTGAATATGGATCTGTTGAGCTGGCTGAGAGAGCTGTTGCTGAGCTGAATGATGAGGGAAACTGGCGGAGTGGCCTCCGGATTCGCCTGATGCTTAGACGCATGTCTAAACCTGCTCAAGGACGGGGAAAGAAGGGACTTGATGTTGAAGTTGGCTGTGATGAGGATTATACTTCTGTGCCTGAGCCACAGGCAAGTGAGAAACAATTAGAAGATGCTTCCTTTCCTGATACTTTGCTGCTTGAACATGCGCAGGGAGAAGAGCATGGTTATGACAAAGAGAGTGGGCAAAGGAAAGGTCGTAGCCGGGGCCGGGGTAAGGGACGTGGCCGAGTTCATTGTCATCAGAATAATCGTGTGGGAACACCCCCTTCAAATAATACAATTTTCACTGATCAAGTCATTGCCAAGCAACCCCCTGGGCCCCGAATGCCGGATGGTACAAGAGGATTTTCAATGGGTAGGGGGAAGCCGGTTGCTGTTAATATAGCGTAA

>Glyma.03g264600.2 sequence-type=CDS polypeptide=Glyma.03g264600.2.p locus=Glyma.03g264600 ID=Glyma.03g264600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCAGGAGTCACTCTCAGAAACCCCTGATATCTCGCCCCCTTCGTCTACTGCACAATCGCTGCCAGATCCATCTCTTTCAAGGAACGTTTCTTTTAGCCGGCTCAACGCACAGGCACCAGAATTTGTGCCCACTCGCGTCTCCCCACGGGGCGATTTTCAGCAACCTAGGCTCGTTGTACCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGTCAGGTATGGTACACGTTTACTCACCGCCCCCAACTTCACAGTTCCATGTACCGATTCAAGGCCATGTCGTCCCGGTCCAGAATCACCACCACCATCTTGCCCATCAGCACCACGTTCCGGCTCACTACCGCTCTCATCATCACCCGCATCAGTATTATGTTAGCTCCGATTCTGCCGTGCAGCAGCCTCAAGTTGACCCAGATCATGCTCCTTCCAAAAGCAAGATGTCTGACGAAGCCAGTCAGAAAATTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTAGCTACTACCGATCATTTGATGAGGTTCATCAACAAAGATCCAGAAGGTTTTGTGCCTATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCATAGCCAGTCACTCCCAACTTGCAACTGTTTTAAGGAACTCGTCAAAGCTCGTGGTCAGTGAAGACGGAAAGAAAATCAAACGCCAGTATCCCCTGACTGAGTCTGATATAGAAGAGCTACAATCTCGCATTGTTGTAGCTGAAAACCTACCTGAGGATCACTGCCATCAGAATCTTATGAAGGTTTTCTCAGCAGTTGGGAGTGTGAAGACTATCCGTACCTGTCCACCTCAAACTTCCAATAGTGGGGCTTCTGCTACTTCAAGATTGGGAAAAGTTGATGGGATGCCTTTATCTAACAAGTTGCATGCATTTGTTGAATATGGATCTGTTGAGCTGGCTGAGAGAGCTGTTGCTGAGCTGAATGATGAGGGAAACTGGCGGAGTGGCCTCCGGATTCGCCTGATGCTTAGACGCATGTCTAAACCTGCTCAAGGACGGGGAAAGAAGGGACTTGATGTTGAAGTTGGCTGTGATGAGGATTATACTTCTGTGCCTGAGCCACAGGCAAGTGAGAAACAATTAGAAGATGCTTCCTTTCCTGATACTTTGCTGCTTGAACATGCGGGAGAAGAGCATGGTTATGACAAAGAGAGTGGGCAAAGGAAAGGTCGTAGCCGGGGCCGGGGTAAGGGACGTGGCCGAGTTCATTGTCATCAGAATAATCGTGTGGGAACACCCCCTTCAAATAATACAATTTTCACTGATCAAGTCATTGCCAAGCAACCCCCTGGGCCCCGAATGCCGGATGGTACAAGAGGATTTTCAATGGGTAGGGGGAAGCCGGTTGCTGTTAATATAGCGTAA

>Glyma.03g264600.3 sequence-type=CDS polypeptide=Glyma.03g264600.3.p locus=Glyma.03g264600 ID=Glyma.03g264600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTCAGGAGTCACTCTCAGAAACCCCTGATATCTCGCCCCCTTCGTCTACTGCACAATCGCTGCCAGATCCATCTCTTTCAAGGAACGTTTCTTTTAGCCGGCTCAACGCACAGGCACCAGAATTTGTGCCCACTCGCGTCTCCCCACGGGGCGATTTTCAGCAACCTAGGCTCGTTGTACCTTCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGTCAGGTATGGTACACGTTTACTCACCGCCCCCAACTTCACAGTTCCATGTACCGATTCAAGGCCATGTCGTCCCGGTCCAGAATCACCACCACCATCTTGCCCATCAGCACCACGTTCCGGCTCACTACCGCTCTCATCATCACCCGCATCAGTATTATGTTAGCTCCGATTCTGCCGTGCAGCAGCCTCAAGTTGACCCAGATCATGCTCCTTCCAAAAGCAAGATGTCTGACGAAGCCAGTCAGAAAATTTTGAATCAGGTGGAGTATTATTTCAGTGATTTAAACTTAGCTACTACCGATCATTTGATGAGGTTCATCAACAAAGATCCAGAAGGTTTTGTGCCTATATCTGTTGTTGCATCTTTCAAGAAGATTAAGGCCCTCATAGCCAGTCACTCCCAACTTGCAACTGTTTTAAGGAACTCGTCAAAGCTCGTGGTCAGTGAAGACGGAAAGAAAATCAAACGCCAGTATCCCCTGACTGAGTCTGATATAGAAGAGCTACAATCTCGCATTGTTGTAGCTGAAAACCTACCTGAGGATCACTGCCATCAGAATCTTATGAAGGTTTTCTCAGCAGTTGGGAGTGTGAAGACTATCCGTACCTGTCCACCTCAAACTTCCAATAGTGGGGCTTCTGCTACTTCAAGATTGGGAAAAGTTGATGGGATGCCTTTATCTAACAAGTTGCATGCATTTGTTGAATATGGATCTGTTGAGCTGGCTGAGAGAGCTGTTGCTGAGCTGAATGATGAGGGAAACTGGCGGAGTGGCCTCCGGATTCGCCTGATGCTTAGACGCATGTCTAAACCTGCTCAAGGACGGGGAAAGAAGGGACAGAGGGCCTCTAATAGAATGAGATAA
Predicted protein sequences of Glyma.03g264600
>Glyma.03g264600.1.p sequence-type=predicted peptide transcript=Glyma.03g264600.1 locus=Glyma.03g264600 ID=Glyma.03g264600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAQESLSETPDISPPSSTAQSLPDPSLSRNVSFSRLNAQAPEFVPTRVSPRGDFQQPRLVVPSPSPSPPPPPPPPPPASGMVHVYSPPPTSQFHVPIQGHVVPVQNHHHHLAHQHHVPAHYRSHHHPHQYYVSSDSAVQQPQVDPDHAPSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIASHSQLATVLRNSSKLVVSEDGKKIKRQYPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNSGASATSRLGKVDGMPLSNKLHAFVEYGSVELAERAVAELNDEGNWRSGLRIRLMLRRMSKPAQGRGKKGLDVEVGCDEDYTSVPEPQASEKQLEDASFPDTLLLEHAQGEEHGYDKESGQRKGRSRGRGKGRGRVHCHQNNRVGTPPSNNTIFTDQVIAKQPPGPRMPDGTRGFSMGRGKPVAVNIA*

>Glyma.03g264600.2.p sequence-type=predicted peptide transcript=Glyma.03g264600.2 locus=Glyma.03g264600 ID=Glyma.03g264600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAQESLSETPDISPPSSTAQSLPDPSLSRNVSFSRLNAQAPEFVPTRVSPRGDFQQPRLVVPSPSPSPPPPPPPPPPASGMVHVYSPPPTSQFHVPIQGHVVPVQNHHHHLAHQHHVPAHYRSHHHPHQYYVSSDSAVQQPQVDPDHAPSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIASHSQLATVLRNSSKLVVSEDGKKIKRQYPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNSGASATSRLGKVDGMPLSNKLHAFVEYGSVELAERAVAELNDEGNWRSGLRIRLMLRRMSKPAQGRGKKGLDVEVGCDEDYTSVPEPQASEKQLEDASFPDTLLLEHAGEEHGYDKESGQRKGRSRGRGKGRGRVHCHQNNRVGTPPSNNTIFTDQVIAKQPPGPRMPDGTRGFSMGRGKPVAVNIA*

>Glyma.03g264600.3.p sequence-type=predicted peptide transcript=Glyma.03g264600.3 locus=Glyma.03g264600 ID=Glyma.03g264600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAQESLSETPDISPPSSTAQSLPDPSLSRNVSFSRLNAQAPEFVPTRVSPRGDFQQPRLVVPSPSPSPPPPPPPPPPASGMVHVYSPPPTSQFHVPIQGHVVPVQNHHHHLAHQHHVPAHYRSHHHPHQYYVSSDSAVQQPQVDPDHAPSKSKMSDEASQKILNQVEYYFSDLNLATTDHLMRFINKDPEGFVPISVVASFKKIKALIASHSQLATVLRNSSKLVVSEDGKKIKRQYPLTESDIEELQSRIVVAENLPEDHCHQNLMKVFSAVGSVKTIRTCPPQTSNSGASATSRLGKVDGMPLSNKLHAFVEYGSVELAERAVAELNDEGNWRSGLRIRLMLRRMSKPAQGRGKKGQRASNRMR*






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