Glyma.03g250800

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Report for Sequence Feature Glyma.03g250800

Feature Type:	gene_model
Chromosome:	Gm03
Start:	44645123
stop:	44649834
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.03g250800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G08630.1	AT	threonine aldolase 1	JGI	N/A	IEA
GO:0006520	GO-bp	cellular amino acid metabolic process	EnsemblGenomes	N/A	IEA
GO:0006520	GO-bp	cellular amino acid metabolic process	JGI	N/A	IEA
GO:0006545	GO-bp	glycine biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0006567	GO-bp	threonine catabolic process	EnsemblGenomes	N/A	IEA
GO:0009058	GO-bp	biosynthetic process	JGI	N/A	IEA
GO:0005829	GO-cc	cytosol	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0008732	GO-mf	L-allo-threonine aldolase activity	EnsemblGenomes	N/A	IEA
GO:0016829	GO-mf	lyase activity	EnsemblGenomes	N/A	IEA
GO:0016829	GO-mf	lyase activity	JGI	N/A	IEA
GO:0030170	GO-mf	pyridoxal phosphate binding	JGI	N/A	IEA
KOG1368	KOG	Threonine aldolase	JGI	N/A	IEA
PTHR10289	Panther	THREONINE ALDOLASE	JGI	N/A	IEA
PF01212	PFAM	Beta-eliminating lyase	JGI	N/A	IEA
GLYSYN2-PWY	SoyCyc9	glycine biosynthesis	Plant Metabolic Network		ISS
GN7V-52170	SoyCyc9-rxn	low-specificity L-threonine aldolase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.03g250800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.03g250800 not represented in the dataset	Glyma.03g250800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.03g250800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma03g41120	Wm82.a1.v1.1	IGC	As supplied by JGI

Coding sequences of Glyma.03g250800

Limit To All Plant Sequences

>Glyma.03g250800.1 sequence-type=CDS polypeptide=Glyma.03g250800.1.p locus=Glyma.03g250800 ID=Glyma.03g250800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTACCTAGGATAGTGGATCTTCGGTCAGATACAGTAACCAAGCCAAGTGAAGCAATGCGAGCTGCTATGGCGAGTGCTGAGGTTGATGATGATGTTCTTGGCCGTGACCCCTCTTGTTTTCGGTTAGAGACAGAGATGGCAAAGATATTGGGAAAGGAAGGTGCACTTTTTGTTCCATCAGGCACTATGGCCAACCTTATATCAGTGCTTGTGCATTGTGACATAAGGGGAAGTGAAGTTATTCTGGGAGACAATTCCCACATACACATTTATGAGAATGGCGGCATTGCAACCCTTGGAGGGGTGCATCCAACAACAGTTAGAAACAATGAAGATGGAACCATGGACATTCATTTGATTGAGGCTGCCATCAGAGATCCAAAGGGGGAGCTAGTATATCCAACCACAAGGCTTATTTGCTTGGAAAATACTCATGGAAACTCTGGTGGTAGATGTCTTTCAGTTGAATATACAGACAGAGTAGGAGAGGTTGCTAAAAAACATGGATTGAAGCTTCACATTGATGGAGCCCGAATATTTAATGCATCAGTTGCACTAGGTGTCCCTGTGGATAGGCTTGTTCAAGCAGCTGATTCAGTATCGGTATGTCTATCAAAAGGCCTCGGTGCTCCAGTTGGATCTGTTATTGTTGGTTCCAATAACTTTATCACCAAGGCTAGACGGCTAAGAAAAACATTAGGTGGTGGAATGAGGCAGGTTGGCATCCTTTGTGCTGCGGCACTCGTTGCTTTGCAGGAAAATGTTGGAAAGCTACAAAGTGATCACAATAAAGCTAAACTTTTGGCTGATGGATTAAATGAAATTAAAGGACTGAGAGTGGATATCTCTTCTGTGGAAACCAATATCATATATGTTGAAGTTGAAGAGGGCTCACGAGCTACAGCAGCAAAGCTATGCAAGGACTTGGAAGACTATGGTATCCTTCTTATGCCAATGGGCTCATCAAGATTGAGAATTGTCTTCCACCACCAAATATCGGCTAGTGACGTGCAGTACGCCTTGTCGTGCTTTCAGCAAGCTGTCAATGGAGTTCGAAATGAAAATGGCAACTAG

Predicted protein sequences of Glyma.03g250800

Limit To All Plant Sequences

>Glyma.03g250800.1.p sequence-type=predicted peptide transcript=Glyma.03g250800.1 locus=Glyma.03g250800 ID=Glyma.03g250800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVPRIVDLRSDTVTKPSEAMRAAMASAEVDDDVLGRDPSCFRLETEMAKILGKEGALFVPSGTMANLISVLVHCDIRGSEVILGDNSHIHIYENGGIATLGGVHPTTVRNNEDGTMDIHLIEAAIRDPKGELVYPTTRLICLENTHGNSGGRCLSVEYTDRVGEVAKKHGLKLHIDGARIFNASVALGVPVDRLVQAADSVSVCLSKGLGAPVGSVIVGSNNFITKARRLRKTLGGGMRQVGILCAAALVALQENVGKLQSDHNKAKLLADGLNEIKGLRVDISSVETNIIYVEVEEGSRATAAKLCKDLEDYGILLMPMGSSRLRIVFHHQISASDVQYALSCFQQAVNGVRNENGN*

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