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Report for Sequence Feature Glyma.03g245900

Feature Type:gene_model
Chromosome:Gm03
Start:45471672
stop:45481445
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g245900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G04820.1AT JGI N/AIEA
5.4.99.27EC tRNA pseudouridine13 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
K06176KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR13326PantherFam TRNA PSEUDOURIDINE SYNTHASE D JGI N/AIEA
PTHR13326:SF8PantherFam OS01G0773000 PROTEIN JGI N/AIEA
PF01142Pfam tRNA pseudouridine synthase D (TruD) JGI N/AIEA

Gene model name correspondences to Glyma.03g245900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g40600 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g245900
>Glyma.03g245900.1 sequence-type=CDS polypeptide=Glyma.03g245900.1.p locus=Glyma.03g245900 id=Glyma.03g245900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCGATGAAAACTGCAGAAGAACACGAAGTGGGTATCTCCTGCTTCATTTCCGACCTTCCTGGCTTCCGCGGAATTTTAAAGCAAAGGTATTCTGATTTTATCGTGAATGAAGTGGACAGAGATGGAACAGTTGTTCAATTGTCCTCGCTTGATGCCCCTCAAGAGGAGCCAGAGAGTTCTCAGGAAAATGGAACCAACACATCCGACAATGTTGTAAGTTATGCCTCTCAGATTGAATCTTTCAAGTCTCTTGCTGGGGACTCTGATGCTGTTCTTTTGGAAGAATTTATTAATAAAATTAATGCCGGTGGAGAAGATGGTGTTTCGCCCATTGTTCTTTCTCCAGATTCTGATAAATCTCATCGAAAGGCAATGCATAACTTCTTTAAGGAAAACTTTAAGTTCCTGGTCACTGATGTGGTTGATGGACCCGATGCTTCATCAAAATGTATCCGTGTGAGATTGAATTCTGCTGAACCAAACAACAAAGGCAAAAACTCCAAGAAACGCAAAGAAAGAGGTGATAAGCCCTTTGACAGCCGAGGTTCAGAAAATTGGCCTAAAAATGTTGGCAAGTTCCTTAGGTTTCATCTTTACAAGGAGAACAAAGATACCCACGAAGCCTTGGGGGTTATTGGAAATATGCTCAGTGTCCAGCCAAAATCATTTGGATTTGCGGGTACAAAGGACAAGCGTGCTGTCACGACCCAAAGGGTTACTGTTTACAAGCAGCGAGCAAGTCGGCTAGCTTCCCTTAACAAGCGCTTGTTTGGTATTAAATTGGGTGATTTCTGTTATGTTAAGGAAGGACTTTGTCTTGGCCAGCTCTTGGGAAATCGATTTACAATCACATTGCGAGGTATTGTTGCAGATTCTGAAGATATCATAAAAGCATCTGCAGATGCCTTAGGAAGGCACGGCTTCATTAACTACTTTGGTCTCCAGCGTTTTGGAAGTGGTTCTTTGCCAACTCACCTTATTGGAGCTGCATTACTCCAAGGGGAATGGAAACTTGCTGTAGACATGATCCTTGATCCAAGAGATGGAGAGAAAAGTGCAATAGCCAAGGCACGCAAGTACTATAAAGAAAGTAGTGATGTTGTTGGGACACTTAAGCAGTTGCCTCGATATTTAGTTGCTGAAAGGGCTGTGCTGCAAACTTTAAAAACGTCTCCTGGAAATTATTTGCAGGCTTTGAAAAGTATTCCAAGGACTCTGAGAATGTTGTATGTTCATAGTTACCAAAGCTATTTGTGGAACCATGCTGCAAGTAAGAGGGTGCAAAAATATGGAACTGAAAATGTAGTATTAGGGGACTTGGTATATTGTAAAGAAAATTCTACTGGAAAGGTTACAGAGTCTGTTGGATCTGAATATGCTGAAGACTGCAGTGGTAGGTATGATTCTAATAACGAAGATGAAATCTCTGGAGAGATTCATGAAGAAATAGATAGTGTCAAGGTTGTCGATGTTGAAGATCTTAATTCAGGATATTACACAATTGATGATGTAATCCTTCCCATGCCAGGTTCAAGGATAAAATATCCAACCAATCATATTGCCAATGTTTATGAAGATTTAGCGAAAAAAGATGGAATCAGTTTAACTGAAAGCGTGCATAATGTGGAGGATTTCTCAATAACTAGTATCACTGGATGCTACAGGAGGGTTTTTCAGAAGCCAATTAACTTTGAATGGGAATTACTTACATATAGTGATAGTAATAAACAATTGGTAGAGACAGATTTAGACAAAGTTAACAAGTCTAAGCCTATGGGCACTGTCAAACAAATGGGTGCAGCAAATGGGAAAAATGAAGAAGCCTTTGATTGCATTAGAGAATTAGAGAGCTCCAATGATGTTGTAAAGGTTGAGAATTATAGTGAGATTGCAGGTGAGGAAATAAAATTACCACACGACGAATCTCTCAGTGGCTCCAGCTCTCAAGATTCCCAAATCGCTCTAAAATTGAGCTTTACTCTTCCTGCTTCATGTTATGCAACAATGGCCATAAGGGAGCTGCTGAAGACTTCAACATCTGTTGCATATCACAAGACATTAAACCAATAG
Predicted protein sequences of Glyma.03g245900
>Glyma.03g245900.1.p sequence-type=predicted peptide transcript=Glyma.03g245900.1 locus=Glyma.03g245900 id=Glyma.03g245900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAMKTAEEHEVGISCFISDLPGFRGILKQRYSDFIVNEVDRDGTVVQLSSLDAPQEEPESSQENGTNTSDNVVSYASQIESFKSLAGDSDAVLLEEFINKINAGGEDGVSPIVLSPDSDKSHRKAMHNFFKENFKFLVTDVVDGPDASSKCIRVRLNSAEPNNKGKNSKKRKERGDKPFDSRGSENWPKNVGKFLRFHLYKENKDTHEALGVIGNMLSVQPKSFGFAGTKDKRAVTTQRVTVYKQRASRLASLNKRLFGIKLGDFCYVKEGLCLGQLLGNRFTITLRGIVADSEDIIKASADALGRHGFINYFGLQRFGSGSLPTHLIGAALLQGEWKLAVDMILDPRDGEKSAIAKARKYYKESSDVVGTLKQLPRYLVAERAVLQTLKTSPGNYLQALKSIPRTLRMLYVHSYQSYLWNHAASKRVQKYGTENVVLGDLVYCKENSTGKVTESVGSEYAEDCSGRYDSNNEDEISGEIHEEIDSVKVVDVEDLNSGYYTIDDVILPMPGSRIKYPTNHIANVYEDLAKKDGISLTESVHNVEDFSITSITGCYRRVFQKPINFEWELLTYSDSNKQLVETDLDKVNKSKPMGTVKQMGAANGKNEEAFDCIRELESSNDVVKVENYSEIAGEEIKLPHDESLSGSSSQDSQIALKLSFTLPASCYATMAIRELLKTSTSVAYHKTLNQ*






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