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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT1G54570.1 | AT | Esterase/lipase/thioesterase family protein | JGI | N/A | IEA |
| GO:0033306 | GO-bp | phytol metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0010287 | GO-cc | plastoglobule | EnsemblGenomes | N/A | IEA |
| GO:0004144 | GO-mf | diacylglycerol O-acyltransferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016747 | GO-mf | transferase activity, transferring acyl groups other than amino-acyl groups | EnsemblGenomes | N/A | IEA |
| GO:0016747 | GO-mf | transferase activity, transferring acyl groups other than amino-acyl groups | JGI | N/A | IEA |
| KOG1454 | KOG | Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) | JGI | N/A | IEA |
| KOG2382 | KOG | Predicted alpha/beta hydrolase | JGI | N/A | IEA |
| PTHR22753 | Panther | FAMILY NOT NAMED | JGI | N/A | IEA |
| PTHR22753:SF5 | Panther | JGI | N/A | IEA | |
| PF03982 | PFAM | Diacylglycerol acyltransferase | JGI | N/A | IEA |
| PF08840 | PFAM | BAAT / Acyl-CoA thioester hydrolase C terminal | JGI | N/A | IEA |
| LIPAS-PWY | SoyCyc9 | triacylglycerol degradation | Plant Metabolic Network | ISS | |
| GN7V-66104 | SoyCyc9-rxn | acylglycerol lipase | Plant Metabolic Network | ISS |
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Glyma.03g243700 not represented in the dataset |
Glyma.03g243700 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Paralog | Evidence | Comments |
|---|---|---|
| Glyma.19g241200 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
>Glyma.03g243700.2 sequence-type=transcript locus=Glyma.03g243700 ID=Glyma.03g243700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 AAATGCTTTACAAAATGAAATCCCACATTTCTTTTATTGCCATTTGTCGCAACCGGAATGTTTGTTATCTTGTGTGTCTGGCACAATGAGTTCCAGCGTTTGCATTTTGGTGTGTGGCTACCTCCTTTCTTTTCCATTCGTGTGTTTCGCTGCAATTTTGCTTCTATCACTCACTCATTCACCGTTACATTTCATTTTCCGCTAAACACAAAACACGTGACCTTCCTCACAGAACAGAAAACTCATTTCTTGCTTCATTCATTTTTACTTTAACATGCAAACTAGCATGTAACGTAAGTTTAACAGTAAAGTAGCTTCCGTTCCCGTTGTGAATGATGGCCTTGGTGACGGGTTTTCTAGCCTCACATGTCGGTGCTGTAAGGCACCACCGGTTTGAAGTTGGAATTGGAGTTCGGGCGGTGTCGTCATCTGAATCTGAAACAGTGGCAGCTGTGAACGGATCTTCTTCGCGGAATGGTTCCTTGCTACTGAAGGAGGAAAAGAAGGTGCCTTTCTTGCGAGTTgaagagaagaagaataagaggggagaagaagaagaagaagGTTTGGCAGCACTTTGGGATGATGGGTATGGAAGAAGGAGTGTGGAAGATTACTTTGCTGCAGCTAAGGAGATGTGCAAATCCGATGGAGGCCCACCTCGATGGTTTTGCCCACTTGAATGTGGGCCTCCTTTCAAGGATTCTCCCACTCTCCTGTTTTTACCTGGGATGGATGGCACAGGATTGGGTCTCACTTTGCACCATCAAGCCCTTGGGAAGGCTTTTGAAGTTCGTTGCTTGCATATTCCAGTTCATGATCGAACACCATTTGAAGGGCTGGTGAAACTTGTTGGAGAAGCTGTCAAGCTCGAATGTGCTTTGTCTCCAAATAAACCAATCTATCTGGTAGGTGATTCTTTTGGTGGAAGTTTAGCACTTGCTGTTGCTGCTCGCAATCCAACAGTTGACCTAGTACTGATATTAGCCAATCCAGGTGATCCAGTGAAGATGGCATCAGTCAATATTGACAATAAGCTTCCTCCTGCCAAAAAAATTGAACAATTGTCATACAACCTTACTGCATTGCTGCCGTGTCTTCCTGAGCTGGCTGATATTATACCAAGGGATACTCTTCTTTGGAAGCTGAAACTTCTCAAATCAGCTGCTGCATATGCTAATTCACGTATTCATGCTGTTAAAGCTGAAGTTCTTGTACTTGCTAGTGGCAAGGATAACATGCTTCCCAGCATAAACGAAGCTCAAAGACTCATGGGATTATTGCAAAACTGCAAAGTTCGTGTCTTTAAGGACAGTGGACACACACTTCTCCTGGAAGATGGTATTGGTCTGCTGACAATCATCAAGGGAACTTGCATGTACCGTCGCTCAAGGAGGCATGATTTGGTCAGGGATTTCATACCTCCCAGTATGACAGAATTCAGATATGCAATGGATCAAGTAGTTGGATCATTTCGTTCTGTTACTGGATCTGTATTTTTCTCAACATTGGAGGATGGAAAGATTACAAAAGGTCTCTCTGGTGTTCCAGATGAAGGTCCTGTCTTATATGTTGGTTATCACATGTTGTTGGGGTTAGAGCTTATCTCACTCACAGATGGATTTTTAAGTGAGAAGGGTATTGTGCTTCGTGGAATAGCCCATCCCGAGCTGTTCAGGCCTAAAGTTGAGTCTTGGTCTTCTGAGTTTTCTATGATTGATTGGGTGAAGATATTTGGTGGGGTGCCTGTTTCAGCAAGCAATATTTTCAAATTGCTTTCAACAAAGTCACATGTTCTCCTATATCCTGGTGGTGCGCGTGAGGCTCTCCATTATAAGGGGGAAGCATACAAGTTGACTTGGCCTGATCACCCAGAATTTGTGAGAATGGCAGCACGATTTGGTGCCACAATTGTGCCATTTGGAGCTGTAGGTGAAGATGATTTAGCTGAATTAGTTCTTGACTACAACGACTTAATGAAGATCCCCATAGTCAACGATCGTATAAGAAATATGAATCGTGACTCAGTTAAGTTTAGAGATGAAACAAGTGGCGAGGTGGCAAACCAAAATCTCACTTTTCCAGTGCTTCTACCAAAGATACCAGGTCGCTTTTACTTTCTATTTGGGAAGCCCATAAAAACAAAAGGCATGGATAAGATTCTAAAAGACAGAGAAAGTGCCAACCAAATGTACCTTGAGATTAAGTCAGAAGTTGAACACAATTTAAATTACTTGATCAAGAAGAGGGAGGAGGATCCATACAGGAACTTCGTCGATAGGAAAATGTATCAGATATTTTATCCTCACGAAACTGATCCAACGCCATCATTTAAGCCCTGAAAAATGTTTTTGATATATAATACTCTTTTTATGTAATCATAATTATTCTTAAACAGGTACATGTACATGGCCATTATTCTAATAAAATATCACtttattttaatttt
>Glyma.03g243700.1 sequence-type=CDS polypeptide=Glyma.03g243700.1.p locus=Glyma.03g243700 ID=Glyma.03g243700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGGCCTTGGTGACGGGTTTTCTAGCCTCACATGTCGGTGCTGTAAGGCACCACCGGTTTGAAGTTGGAATTGGAGTTCGGGCGGTGTCGTCATCTGAATCTGAAACAGTGGCAGCTGTGAACGGATCTTCTTCGCGGAATGGTTCCTTGCTACTGAAGGAGGAAAAGAAGGTGCCTTTCTTGCGAGTTGAAGAGAAGAAGAATAAGAGGGGAGAAGAAGAAGAAGAAGGTTTGGCAGCACTTTGGGATGATGGGTATGGAAGAAGGAGTGTGGAAGATTACTTTGCTGCAGCTAAGGAGATGTGCAAATCCGATGGAGGCCCACCTCGATGGTTTTGCCCACTTGAATGTGGGCCTCCTTTCAAGGATTCTCCCACTCTCCTGTTTTTACCTGGGATGGATGGCACAGGATTGGGTCTCACTTTGCACCATCAAGCCCTTGGGAAGGCTTTTGAAGTTCGTTGCTTGCATATTCCAGTTCATGATCGAACACCATTTGAAGGGCTGGTGAAACTTGTTGGAGAAGCTGTCAAGCTCGAATGTGCTTTGTCTCCAAATAAACCAATCTATCTGGTAGGTGATTCTTTTGGTGGAAGTTTAGCACTTGCTGTTGCTGCTCGCAATCCAACAGTTGACCTAGTACTGATATTAGCCAATCCAGCTACATCCTTCGGCCAATCTCAGTTGCAACCTTTGTTTCCTTTCATGGAAGCTTTGCCTGACGAACTGCATGTTGCTGTTCCCTTTCTTCTTAGTTTTATCATGGGTGATCCAGTGAAGATGGCATCAGTCAATATTGACAATAAGCTTCCTCCTGCCAAAAAAATTGAACAATTGTCATACAACCTTACTGCATTGCTGCCGTGTCTTCCTGAGCTGGCTGATATTATACCAAGGGATACTCTTCTTTGGAAGCTGAAACTTCTCAAATCAGCTGCTGCATATGCTAATTCACGTATTCATGCTGTTAAAGCTGAAGTTCTTGTACTTGCTAGTGGCAAGGATAACATGCTTCCCAGCATAAACGAAGCTCAAAGACTCATGGGATTATTGCAAAACTGCAAAGTTCGTGTCTTTAAGGACAGTGGACACACACTTCTCCTGGAAGATGGTATTGGTCTGCTGACAATCATCAAGGGAACTTGCATGTACCGTCGCTCAAGGAGGCATGATTTGGTCAGGGATTTCATACCTCCCAGTATGACAGAATTCAGATATGCAATGGATCAAGTAGTTGGATCATTTCGTTCTGTTACTGGATCTGTATTTTTCTCAACATTGGAGGATGGAAAGATTACAAAAGGTCTCTCTGGTGTTCCAGATGAAGGTCCTGTCTTATATGTTGGTTATCACATGTTGTTGGGGTTAGAGCTTATCTCACTCACAGATGGATTTTTAAGTGAGAAGGGTATTGTGCTTCGTGGAATAGCCCATCCCGAGCTGTTCAGGCCTAAAGTTGAGTCTTGGTCTTCTGAGTTTTCTATGATTGATTGGGTGAAGATATTTGGTGGGGTGCCTGTTTCAGCAAGCAATATTTTCAAATTGCTTTCAACAAAGTCACATGTTCTCCTATATCCTGGTGGTGCGCGTGAGGCTCTCCATTATAAGGGGGAAGCATACAAGTTGACTTGGCCTGATCACCCAGAATTTGTGAGAATGGCAGCACGATTTGGTGCCACAATTGTGCCATTTGGAGCTGTAGGTGAAGATGATTTAGCTGAATTAGTTCTTGACTACAACGACTTAATGAAGATCCCCATAGTCAACGATCGTATAAGAAATATGAATCGTGACTCAGTTAAGTTTAGAGATGAAACAAGTGGCGAGGTGGCAAACCAAAATCTCACTTTTCCAGTGCTTCTACCAAAGATACCAGGTCGCTTTTACTTTCTATTTGGGAAGCCCATAAAAACAAAAGGCATGGATAAGATTCTAAAAGACAGAGAAAGTGCCAACCAAATGTACCTTGAGATTAAGTCAGAAGTTGAACACAATTTAAATTACTTGATCAAGAAGAGGGAGGAGGATCCATACAGGAACTTCGTCGATAGGAAAATGTATCAGATATTTTATCCTCACGAAACTGATCCAACGCCATCATTTAAGCCCTGA >Glyma.03g243700.2 sequence-type=CDS polypeptide=Glyma.03g243700.2.p locus=Glyma.03g243700 ID=Glyma.03g243700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGATGGCCTTGGTGACGGGTTTTCTAGCCTCACATGTCGGTGCTGTAAGGCACCACCGGTTTGAAGTTGGAATTGGAGTTCGGGCGGTGTCGTCATCTGAATCTGAAACAGTGGCAGCTGTGAACGGATCTTCTTCGCGGAATGGTTCCTTGCTACTGAAGGAGGAAAAGAAGGTGCCTTTCTTGCGAGTTGAAGAGAAGAAGAATAAGAGGGGAGAAGAAGAAGAAGAAGGTTTGGCAGCACTTTGGGATGATGGGTATGGAAGAAGGAGTGTGGAAGATTACTTTGCTGCAGCTAAGGAGATGTGCAAATCCGATGGAGGCCCACCTCGATGGTTTTGCCCACTTGAATGTGGGCCTCCTTTCAAGGATTCTCCCACTCTCCTGTTTTTACCTGGGATGGATGGCACAGGATTGGGTCTCACTTTGCACCATCAAGCCCTTGGGAAGGCTTTTGAAGTTCGTTGCTTGCATATTCCAGTTCATGATCGAACACCATTTGAAGGGCTGGTGAAACTTGTTGGAGAAGCTGTCAAGCTCGAATGTGCTTTGTCTCCAAATAAACCAATCTATCTGGTAGGTGATTCTTTTGGTGGAAGTTTAGCACTTGCTGTTGCTGCTCGCAATCCAACAGTTGACCTAGTACTGATATTAGCCAATCCAGGTGATCCAGTGAAGATGGCATCAGTCAATATTGACAATAAGCTTCCTCCTGCCAAAAAAATTGAACAATTGTCATACAACCTTACTGCATTGCTGCCGTGTCTTCCTGAGCTGGCTGATATTATACCAAGGGATACTCTTCTTTGGAAGCTGAAACTTCTCAAATCAGCTGCTGCATATGCTAATTCACGTATTCATGCTGTTAAAGCTGAAGTTCTTGTACTTGCTAGTGGCAAGGATAACATGCTTCCCAGCATAAACGAAGCTCAAAGACTCATGGGATTATTGCAAAACTGCAAAGTTCGTGTCTTTAAGGACAGTGGACACACACTTCTCCTGGAAGATGGTATTGGTCTGCTGACAATCATCAAGGGAACTTGCATGTACCGTCGCTCAAGGAGGCATGATTTGGTCAGGGATTTCATACCTCCCAGTATGACAGAATTCAGATATGCAATGGATCAAGTAGTTGGATCATTTCGTTCTGTTACTGGATCTGTATTTTTCTCAACATTGGAGGATGGAAAGATTACAAAAGGTCTCTCTGGTGTTCCAGATGAAGGTCCTGTCTTATATGTTGGTTATCACATGTTGTTGGGGTTAGAGCTTATCTCACTCACAGATGGATTTTTAAGTGAGAAGGGTATTGTGCTTCGTGGAATAGCCCATCCCGAGCTGTTCAGGCCTAAAGTTGAGTCTTGGTCTTCTGAGTTTTCTATGATTGATTGGGTGAAGATATTTGGTGGGGTGCCTGTTTCAGCAAGCAATATTTTCAAATTGCTTTCAACAAAGTCACATGTTCTCCTATATCCTGGTGGTGCGCGTGAGGCTCTCCATTATAAGGGGGAAGCATACAAGTTGACTTGGCCTGATCACCCAGAATTTGTGAGAATGGCAGCACGATTTGGTGCCACAATTGTGCCATTTGGAGCTGTAGGTGAAGATGATTTAGCTGAATTAGTTCTTGACTACAACGACTTAATGAAGATCCCCATAGTCAACGATCGTATAAGAAATATGAATCGTGACTCAGTTAAGTTTAGAGATGAAACAAGTGGCGAGGTGGCAAACCAAAATCTCACTTTTCCAGTGCTTCTACCAAAGATACCAGGTCGCTTTTACTTTCTATTTGGGAAGCCCATAAAAACAAAAGGCATGGATAAGATTCTAAAAGACAGAGAAAGTGCCAACCAAATGTACCTTGAGATTAAGTCAGAAGTTGAACACAATTTAAATTACTTGATCAAGAAGAGGGAGGAGGATCCATACAGGAACTTCGTCGATAGGAAAATGTATCAGATATTTTATCCTCACGAAACTGATCCAACGCCATCATTTAAGCCCTGA
>Glyma.03g243700.1.p sequence-type=predicted peptide transcript=Glyma.03g243700.1 locus=Glyma.03g243700 ID=Glyma.03g243700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMALVTGFLASHVGAVRHHRFEVGIGVRAVSSSESETVAAVNGSSSRNGSLLLKEEKKVPFLRVEEKKNKRGEEEEEGLAALWDDGYGRRSVEDYFAAAKEMCKSDGGPPRWFCPLECGPPFKDSPTLLFLPGMDGTGLGLTLHHQALGKAFEVRCLHIPVHDRTPFEGLVKLVGEAVKLECALSPNKPIYLVGDSFGGSLALAVAARNPTVDLVLILANPATSFGQSQLQPLFPFMEALPDELHVAVPFLLSFIMGDPVKMASVNIDNKLPPAKKIEQLSYNLTALLPCLPELADIIPRDTLLWKLKLLKSAAAYANSRIHAVKAEVLVLASGKDNMLPSINEAQRLMGLLQNCKVRVFKDSGHTLLLEDGIGLLTIIKGTCMYRRSRRHDLVRDFIPPSMTEFRYAMDQVVGSFRSVTGSVFFSTLEDGKITKGLSGVPDEGPVLYVGYHMLLGLELISLTDGFLSEKGIVLRGIAHPELFRPKVESWSSEFSMIDWVKIFGGVPVSASNIFKLLSTKSHVLLYPGGAREALHYKGEAYKLTWPDHPEFVRMAARFGATIVPFGAVGEDDLAELVLDYNDLMKIPIVNDRIRNMNRDSVKFRDETSGEVANQNLTFPVLLPKIPGRFYFLFGKPIKTKGMDKILKDRESANQMYLEIKSEVEHNLNYLIKKREEDPYRNFVDRKMYQIFYPHETDPTPSFKP* >Glyma.03g243700.2.p sequence-type=predicted peptide transcript=Glyma.03g243700.2 locus=Glyma.03g243700 ID=Glyma.03g243700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MMALVTGFLASHVGAVRHHRFEVGIGVRAVSSSESETVAAVNGSSSRNGSLLLKEEKKVPFLRVEEKKNKRGEEEEEGLAALWDDGYGRRSVEDYFAAAKEMCKSDGGPPRWFCPLECGPPFKDSPTLLFLPGMDGTGLGLTLHHQALGKAFEVRCLHIPVHDRTPFEGLVKLVGEAVKLECALSPNKPIYLVGDSFGGSLALAVAARNPTVDLVLILANPGDPVKMASVNIDNKLPPAKKIEQLSYNLTALLPCLPELADIIPRDTLLWKLKLLKSAAAYANSRIHAVKAEVLVLASGKDNMLPSINEAQRLMGLLQNCKVRVFKDSGHTLLLEDGIGLLTIIKGTCMYRRSRRHDLVRDFIPPSMTEFRYAMDQVVGSFRSVTGSVFFSTLEDGKITKGLSGVPDEGPVLYVGYHMLLGLELISLTDGFLSEKGIVLRGIAHPELFRPKVESWSSEFSMIDWVKIFGGVPVSASNIFKLLSTKSHVLLYPGGAREALHYKGEAYKLTWPDHPEFVRMAARFGATIVPFGAVGEDDLAELVLDYNDLMKIPIVNDRIRNMNRDSVKFRDETSGEVANQNLTFPVLLPKIPGRFYFLFGKPIKTKGMDKILKDRESANQMYLEIKSEVEHNLNYLIKKREEDPYRNFVDRKMYQIFYPHETDPTPSFKP*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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