SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.03g239400

Feature Type:gene_model
Chromosome:Gm03
Start:44993824
stop:44995818
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.03g239400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G08970.2AT HAP5C,NF-YC9 JGI N/AIEA
K08066KEGG Transcription factors JGI N/AIEA
PTHR10252PantherFam HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED JGI N/AIEA
PF00808Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone JGI N/AIEA

Proteins Associated with Glyma.03g239400
LocusGene SymbolProtein Name
NF-YC02 nuclear factor Y transcription factor family protein

Gene model name correspondences to Glyma.03g239400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g39911 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.03g239400
>Glyma.03g239400.1 sequence-type=CDS polypeptide=Glyma.03g239400.1.p locus=Glyma.03g239400 id=Glyma.03g239400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCATCAAGGGCATAGCCAGAACCCATCTATGGGGGTTGTTGGTAGTGGAGCTCAATTAGCATATGGTTCTAACCCATATCAGCCAGGCCAAATAACTGGGCCACCGGGGTCTGTTGTGACATCAGTTGGGACCATTCAATCCACCGGTCAACCTGCTGGAGCTCAGCTTGGACAGCATCAACTTGCTTATCAGCATATTCATCAGCAACAACAGCACCAGCTTCAGCAACAGCTCCAACAATTTTGGTCAAGCCAGTACCAAGAAATTGAGAAGGTTACTGATTTTAAGAACCACAGTCTTCCCCTGGCAAGGATCAAGAAGATTATGAAGGCTGACGAGGATGTTAGGATGATATCAGCTGAAGCACCAGTCATTTTTGCAAGGGCATGTGAAATGTTCATATTAGAGTTAACCCTGCGCTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACACTTCAGAAAAATGATATTGCTGCTGCTATCACAAGGACTGACATCTTTGATTTCTTGGTTGACATTGTGCCTCGTGAGGACTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCCCTTCCATACTGCTACATGCCGCCTCAGCATCCGTCCCAAGTTGGAGCTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAAACATGTATGCTCAGCAG

>Glyma.03g239400.2 sequence-type=CDS polypeptide=Glyma.03g239400.2.p locus=Glyma.03g239400 id=Glyma.03g239400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCATCAAGGGCATAGCCAGAACCCATCTATGGGGGTTGTTGGTAGTGGAGCTCAATTAGCATATGGTTCTAACCCATATCAGCCAGGCCAAATAACTGGGCCACCGGGGTCTGTTGTGACATCAGTTGGGACCATTCAATCCACCGGTCAACCTGCTGGAGCTCAGCTTGGACAGCATCAACTTGCTTATCAGCATATTCATCAGCAACAACAGCACCAGCTTCAGCAACAGCTCCAACAATTTTGGTCAAGCCAGTACCAAGAAATTGAGAAGGTTACTGATTTTAAGAACCACAGTCTTCCCCTGGCAAGGATCAAGAAGATTATGAAGGCTGACGAGGATGTTAGGATGATATCAGCTGAAGCACCAGTCATTTTTGCAAGGGCATGTGAAATGTTCATATTAGAGTTAACCCTGCGCTCTTGGAATCACACTGAAGAGAACAAAAGGCGAACACTTCAGAAAAATGATATTGCTGCTGCTATCACAAGGACTGACATCTTTGATTTCTTGGTTGACATTGTGCCTCGTGAGGACTTGAAAGATGAAGTGCTTGCATCAATCCCAAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCCCTTCCATACTGCTACATGCCGCCTCAGCATCCGTCCCAAGTTGGAGCTGCTGGTGTCATAATGGGTAAGCCTGTGATGGACCCAAACATGTATGCTCAGCAG
Predicted protein sequences of Glyma.03g239400
>Glyma.03g239400.1.p sequence-type=predicted peptide transcript=Glyma.03g239400.1 locus=Glyma.03g239400 id=Glyma.03g239400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHQGHSQNPSMGVVGSGAQLAYGSNPYQPGQITGPPGSVVTSVGTIQSTGQPAGAQLGQHQLAYQHIHQQQQHQLQQQLQQFWSSQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHPSQVGAAGVIMGKPVMDPNMYAQQ

>Glyma.03g239400.2.p sequence-type=predicted peptide transcript=Glyma.03g239400.2 locus=Glyma.03g239400 id=Glyma.03g239400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDHQGHSQNPSMGVVGSGAQLAYGSNPYQPGQITGPPGSVVTSVGTIQSTGQPAGAQLGQHQLAYQHIHQQQQHQLQQQLQQFWSSQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYCYMPPQHPSQVGAAGVIMGKPVMDPNMYAQQ






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo