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Report for Sequence Feature Glyma.03g219500

Feature Type:gene_model
Chromosome:Gm03
Start:42297300
stop:42303690
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.03g219500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G47390.1AT Prolyl oligopeptidase family protein JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0008236GO-mf serine-type peptidase activity EnsemblGenomesN/AIEA
GO:0008236GO-mf serine-type peptidase activity JGI N/AIEA
GO:0016787GO-mf hydrolase activity JGI N/AIEA
KOG2100 KOG Dipeptidyl aminopeptidase JGI N/AIEA
PTHR11731Panther PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED JGI N/AIEA
PTHR11731:SF5Panther GLUTAMYL ENDOPEPTIDASE, CHLOROPLASTIC-RELATED JGI N/AIEA
PF00326PFAM Prolyl oligopeptidase family JGI N/AIEA

Expression Patterns of Glyma.03g219500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Paralogs of Glyma.03g219500
ParalogEvidenceComments
Glyma.19g216400 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.03g219500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma03g37810 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.03g219500
>Glyma.03g219500.2 sequence-type=transcript locus=Glyma.03g219500 ID=Glyma.03g219500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GGCAATGGAAATGGCAGCTTACTTACTAGTACCTAGCAACAGTAGCAGCGGATATACCGAGACGGAGATAGAAAAAATATAACGCAGGAATCGAATTCTTAATTTTATCAGATGATGCGACTTCACAAACTGTATCATCGCTTCACTCTTGTCCCCCTTTCGCTCCCTTCTAATCCCTCTCTTCTTCCTCTCGCTCCTCCGTTGCGCCTCACGCTCCGTCACCGAACCTCTGTGAACTTCGCTTCCATGGCTTCCTCGCGGTTGCGCAATTTAGCACCTCTCGCTGCTGCGCCCACTGAAGACGCCGCCGCTGCCTCCATTTCTTCCTCTCCCAACGCCGCTGCTTCCGTTGACTACGATGATGAGTCAACTGTAGGAGTAAGGTATCGCGTTCCTCCATCTGTGATCAGTGATATTGTTGATGCTCCACCTGTACCTGCGTTGTCATTTTCACCACTTAGGGACAGAATTATTTTTCTCAAGCGAAGAGCTTTACCTCCACTGGCAGAAATAGCAAGGCCGGAGGAAAAGTTGGCTGGTATACGTATTGATGGAAAGTGCAATACTAGGAGTCGCATGTCATTCTACACTGGTATAGGGATCCATCAAATTCTTCCTGACGGTACATTAGGGTCAGAGACTGAGGTGTCCGGTTTCCCTGTTGGTGCTAAAATAAATTTTGTTTCTTGGTCTCCTGATGGTTGTCATTTGTCCTTTAGCATTCGTGTGAATGAGGAGGACAATGATAGCAGTAAACTCACAGTATGGATTGCAGATGTGAAAACAGGGATAGCTAGAAAGTTGTTTCAGTCACCTAATGTACATTTGAATGCAGTTTTTGACAATTATGTTTGGGTAAATAATTCTTCATTGTTAGTTTGCACCATTCCATCATCCCGTGGAGCTCCTCCAAAGAAACCTTTGGTTCCAAGTTGCCCAAAAATTCAATCCAACGAGGAGAGAAGCATTATTCAAGTAAGAACATTCCAGGATTTGCTGAAGGATGAGTACGATGAAGATTTGTTTGACTACTATGCCACCTCACAGCTTGTTTTGGCTTCTTTGGATGGTACTACAAAAGAAATTGGCCCACCAGCTGTATATACCTCCATGGATCCTTCCCCAGATCACAAGTACATTTTGATTAATTCACTTCACAGGCCATACTCCTTCATTGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAGTGCTGATGGAAAATTAATCAGGGAGCTCTGTGACTTGCCCCTTGCTGAGGACATTCCAATTGCATTCAATAGTGTGCGAAAAGGGATGCGTTCCATTAATTGGAGAGCTGATAAGCCGTCTACTCTTTACTGGGTAGAAACTCAAGATGGAGGTGATGCAAAGGTGGAAATTTCTCCTCGTGATATAATTTATACACAGCCTGCTGAACCACTAGAAGGTGAACACCCAACAATATTACACAAGCTTGATTTCCGCTATGGAGGGGTTTCTTGGTGTGATGATTCACTGGCTTTGGTATATGAATCTTGGTACAAAACACGGAAAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTAGCTCCGCGCATCCTATTTGATAGATCTTCAGAAGATGTGTACTCTGATCCCGGTTCTCCTATGATGCGGAGAACTCAAGCTGGGACATACATTATTGCCAGGATAAAGAAGGAAAGTGATGAAGGAAGATATATTATACTGAATGGAAATGGTGCTACACCAGAAGGAAACATTCCATTCCTTGATCTGTTTGACATAAATACAGGTAAAAAAATGGAACGAATCTGGGAGAGCGATAAGGAGAAGTATTATGAGACTGTTGTTGCTCTAATGTCTGATCAAGAAGAAGGGGATTTGTATTTAGATAAACTGAAGATACTGACTTCTAAAGAGTCAAAAACTGAAAACACCCAATACTACTTTGTTAGCTGGCCAGATAAAAACATAGTTCAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCATTGCAGAAAGAGATGATCAGATATGAAAGAAAAGACGGGGTTCAACTTACTGCTACATTATACCTACCACCAGGTTACAATCCATCAACAGATGGCCCTTTGCCATGCCTGGTTTGGTCTTACCCAGGAGAATTTAAGAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCAAATGAATTTGCTGGAATAGGCTCCACATCAGCCCTTCTTTGGCTGGCTAGAAGGTTTGCAATTCTATCTGGGCCTACCATTCCTATTATTGGCGAGGGTGATGAAGAGGCAAATGATAGGTATGTAGAACAATTAGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTTATCCAGCGTGGGGTAAGCTTTATTTTTACTGTATGGAGAATATGAAGT
Coding sequences of Glyma.03g219500
>Glyma.03g219500.1 sequence-type=CDS polypeptide=Glyma.03g219500.1.p locus=Glyma.03g219500 ID=Glyma.03g219500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGCGACTTCACAAACTGTATCATCGCTTCACTCTTGTCCCCCTTTCGCTCCCTTCTAATCCCTCTCTTCTTCCTCTCGCTCCTCCGTTGCGCCTCACGCTCCGTCACCGAACCTCTGTGAACTTCGCTTCCATGGCTTCCTCGCGGTTGCGCAATTTAGCACCTCTCGCTGCTGCGCCCACTGAAGACGCCGCCGCTGCCTCCATTTCTTCCTCTCCCAACGCCGCTGCTTCCGTTGACTACGATGATGAGTCAACTGTAGGAGTAAGGTATCGCGTTCCTCCATCTGTGATCAGTGATATTGTTGATGCTCCACCTGTACCTGCGTTGTCATTTTCACCACTTAGGGACAGAATTATTTTTCTCAAGCGAAGAGCTTTACCTCCACTGGCAGAAATAGCAAGGCCGGAGGAAAAGTTGGCTGGTATACGTATTGATGGAAAGTGCAATACTAGGAGTCGCATGTCATTCTACACTGGTATAGGGATCCATCAAATTCTTCCTGACGGTACATTAGGGTCAGAGACTGAGGTGTCCGGTTTCCCTGTTGGTGCTAAAATAAATTTTGTTTCTTGGTCTCCTGATGGTTGTCATTTGTCCTTTAGCATTCGTGTGAATGAGGAGGACAATGATAGCAGTAAACTCACAGTATGGATTGCAGATGTGAAAACAGGGATAGCTAGAAAGTTGTTTCAGTCACCTAATGTACATTTGAATGCAGTTTTTGACAATTATGTTTGGGTAAATAATTCTTCATTGTTAGTTTGCACCATTCCATCATCCCGTGGAGCTCCTCCAAAGAAACCTTTGGTTCCAAGTTGCCCAAAAATTCAATCCAACGAGGAGAGAAGCATTATTCAAGTAAGAACATTCCAGGATTTGCTGAAGGATGAGTACGATGAAGATTTGTTTGACTACTATGCCACCTCACAGCTTGTTTTGGCTTCTTTGGATGGTACTACAAAAGAAATTGGCCCACCAGCTGTATATACCTCCATGGATCCTTCCCCAGATCACAAGTACATTTTGATTAATTCACTTCACAGGCCATACTCCTTCATTGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAGTGCTGATGGAAAATTAATCAGGGAGCTCTGTGACTTGCCCCTTGCTGAGGACATTCCAATTGCATTCAATAGTGTGCGAAAAGGGATGCGTTCCATTAATTGGAGAGCTGATAAGCCGTCTACTCTTTACTGGGTAGAAACTCAAGATGGAGGTGATGCAAAGGTGGAAATTTCTCCTCGTGATATAATTTATACACAGCCTGCTGAACCACTAGAAGGTGAACACCCAACAATATTACACAAGCTTGATTTCCGCTATGGAGGGGTTTCTTGGTGTGATGATTCACTGGCTTTGGTATATGAATCTTGGTACAAAACACGGAAAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTAGCTCCGCGCATCCTATTTGATAGATCTTCAGAAGATGTGTACTCTGATCCCGGTTCTCCTATGATGCGGAGAACTCAAGCTGGGACATACATTATTGCCAGGATAAAGAAGGAAAGTGATGAAGGAAGATATATTATACTGAATGGAAATGGTGCTACACCAGAAGGAAACATTCCATTCCTTGATCTGTTTGACATAAATACAGGTAAAAAAATGGAACGAATCTGGGAGAGCGATAAGGAGAAGTATTATGAGACTGTTGTTGCTCTAATGTCTGATCAAGAAGAAGGGGATTTGTATTTAGATAAACTGAAGATACTGACTTCTAAAGAGTCAAAAACTGAAAACACCCAATACTACTTTGTTAGCTGGCCAGATAAAAACATAGTTCAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCATTGCAGAAAGAGATGATCAGATATGAAAGAAAAGACGGGGTTCAACTTACTGCTACATTATACCTACCACCAGGTTACAATCCATCAACAGATGGCCCTTTGCCATGCCTGGTTTGGTCTTACCCAGGAGAATTTAAGAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCAAATGAATTTGCTGGAATAGGCTCCACATCAGCCCTTCTTTGGCTGGCTAGAAGGTTTGCAATTCTATCTGGGCCTACCATTCCTATTATTGGCGAGGGTGATGAAGAGGCAAATGATAGGTATGTAGAACAATTAGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTTATCCAGCGTGGGGTGGCTGATCCGAAGAAAATAGCTGTTGGTGGACATTCCTATGGTGCGTTCATGACTGCTAACCTGCTGGCACACGCACCTCATCTTTTTTGTTGTGGAATTGCTCGTTCTGGTGCTTACAACAGAACACTTACTCCCTTTGGTTTTCAGAATGAAGACAGAACTCTTTGGGAGGCCACTAATACTTATGTAGAGATGAGTCCTTTTATGTCGGCTAATAAAATTAAGAAGCCCATCTTGCTTATTCACGGGGAAGAGGACAATAATCCAGGAACATTAACCATGCAGTCAGACAGGTTTTTCAACGCTCTAAAGGGTCATGGTGCTCTTTGTCGGCTGGTGATTTTGCCTCACGAGAGTCATGGTTACACTGCTAAAGAAAGCATCATGCATGTCCTTTGGGAAACAGATAGATGGCTCCATAAATATTGTGTGTCAAACAGCTCTGAGGCAGGAGAAGACCATGCTACTGATACAGTCAAAGAACATGTTAGCAAAGGCACCACAAATGCTGAAAGCAAAGTGGTTGCACCCAGCGGAGGCGGCAGCAGAGAGGTGTCTGATCTTGAGTACGAAGAATTTCATTCTCTGCCGAGGTCATCCTTGTGA

>Glyma.03g219500.2 sequence-type=CDS polypeptide=Glyma.03g219500.2.p locus=Glyma.03g219500 ID=Glyma.03g219500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATGCGACTTCACAAACTGTATCATCGCTTCACTCTTGTCCCCCTTTCGCTCCCTTCTAATCCCTCTCTTCTTCCTCTCGCTCCTCCGTTGCGCCTCACGCTCCGTCACCGAACCTCTGTGAACTTCGCTTCCATGGCTTCCTCGCGGTTGCGCAATTTAGCACCTCTCGCTGCTGCGCCCACTGAAGACGCCGCCGCTGCCTCCATTTCTTCCTCTCCCAACGCCGCTGCTTCCGTTGACTACGATGATGAGTCAACTGTAGGAGTAAGGTATCGCGTTCCTCCATCTGTGATCAGTGATATTGTTGATGCTCCACCTGTACCTGCGTTGTCATTTTCACCACTTAGGGACAGAATTATTTTTCTCAAGCGAAGAGCTTTACCTCCACTGGCAGAAATAGCAAGGCCGGAGGAAAAGTTGGCTGGTATACGTATTGATGGAAAGTGCAATACTAGGAGTCGCATGTCATTCTACACTGGTATAGGGATCCATCAAATTCTTCCTGACGGTACATTAGGGTCAGAGACTGAGGTGTCCGGTTTCCCTGTTGGTGCTAAAATAAATTTTGTTTCTTGGTCTCCTGATGGTTGTCATTTGTCCTTTAGCATTCGTGTGAATGAGGAGGACAATGATAGCAGTAAACTCACAGTATGGATTGCAGATGTGAAAACAGGGATAGCTAGAAAGTTGTTTCAGTCACCTAATGTACATTTGAATGCAGTTTTTGACAATTATGTTTGGGTAAATAATTCTTCATTGTTAGTTTGCACCATTCCATCATCCCGTGGAGCTCCTCCAAAGAAACCTTTGGTTCCAAGTTGCCCAAAAATTCAATCCAACGAGGAGAGAAGCATTATTCAAGTAAGAACATTCCAGGATTTGCTGAAGGATGAGTACGATGAAGATTTGTTTGACTACTATGCCACCTCACAGCTTGTTTTGGCTTCTTTGGATGGTACTACAAAAGAAATTGGCCCACCAGCTGTATATACCTCCATGGATCCTTCCCCAGATCACAAGTACATTTTGATTAATTCACTTCACAGGCCATACTCCTTCATTGTACCTTGTGGAAGATTTCCAAAGAAGGTAGAGTTATGGAGTGCTGATGGAAAATTAATCAGGGAGCTCTGTGACTTGCCCCTTGCTGAGGACATTCCAATTGCATTCAATAGTGTGCGAAAAGGGATGCGTTCCATTAATTGGAGAGCTGATAAGCCGTCTACTCTTTACTGGGTAGAAACTCAAGATGGAGGTGATGCAAAGGTGGAAATTTCTCCTCGTGATATAATTTATACACAGCCTGCTGAACCACTAGAAGGTGAACACCCAACAATATTACACAAGCTTGATTTCCGCTATGGAGGGGTTTCTTGGTGTGATGATTCACTGGCTTTGGTATATGAATCTTGGTACAAAACACGGAAAATAAGAACATGGGTAGTCTCTCCTGGATCTGAAGATGTAGCTCCGCGCATCCTATTTGATAGATCTTCAGAAGATGTGTACTCTGATCCCGGTTCTCCTATGATGCGGAGAACTCAAGCTGGGACATACATTATTGCCAGGATAAAGAAGGAAAGTGATGAAGGAAGATATATTATACTGAATGGAAATGGTGCTACACCAGAAGGAAACATTCCATTCCTTGATCTGTTTGACATAAATACAGGTAAAAAAATGGAACGAATCTGGGAGAGCGATAAGGAGAAGTATTATGAGACTGTTGTTGCTCTAATGTCTGATCAAGAAGAAGGGGATTTGTATTTAGATAAACTGAAGATACTGACTTCTAAAGAGTCAAAAACTGAAAACACCCAATACTACTTTGTTAGCTGGCCAGATAAAAACATAGTTCAGGTTACAAATTTCCCTCATCCATACCCTCAGCTTGCATCATTGCAGAAAGAGATGATCAGATATGAAAGAAAAGACGGGGTTCAACTTACTGCTACATTATACCTACCACCAGGTTACAATCCATCAACAGATGGCCCTTTGCCATGCCTGGTTTGGTCTTACCCAGGAGAATTTAAGAGCAAAGATGCTGCTGGACAAGTTCGTGGTTCTCCAAATGAATTTGCTGGAATAGGCTCCACATCAGCCCTTCTTTGGCTGGCTAGAAGGTTTGCAATTCTATCTGGGCCTACCATTCCTATTATTGGCGAGGGTGATGAAGAGGCAAATGATAGGTATGTAGAACAATTAGTTGCAAGTGCAGAGGCTGCTGTGGAGGAAGTTATCCAGCGTGGGGTAAGCTTTATTTTTACTGTATGGAGAATATGA
Predicted protein sequences of Glyma.03g219500
>Glyma.03g219500.1.p sequence-type=predicted peptide transcript=Glyma.03g219500.1 locus=Glyma.03g219500 ID=Glyma.03g219500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMRLHKLYHRFTLVPLSLPSNPSLLPLAPPLRLTLRHRTSVNFASMASSRLRNLAPLAAAPTEDAAAASISSSPNAAASVDYDDESTVGVRYRVPPSVISDIVDAPPVPALSFSPLRDRIIFLKRRALPPLAEIARPEEKLAGIRIDGKCNTRSRMSFYTGIGIHQILPDGTLGSETEVSGFPVGAKINFVSWSPDGCHLSFSIRVNEEDNDSSKLTVWIADVKTGIARKLFQSPNVHLNAVFDNYVWVNNSSLLVCTIPSSRGAPPKKPLVPSCPKIQSNEERSIIQVRTFQDLLKDEYDEDLFDYYATSQLVLASLDGTTKEIGPPAVYTSMDPSPDHKYILINSLHRPYSFIVPCGRFPKKVELWSADGKLIRELCDLPLAEDIPIAFNSVRKGMRSINWRADKPSTLYWVETQDGGDAKVEISPRDIIYTQPAEPLEGEHPTILHKLDFRYGGVSWCDDSLALVYESWYKTRKIRTWVVSPGSEDVAPRILFDRSSEDVYSDPGSPMMRRTQAGTYIIARIKKESDEGRYIILNGNGATPEGNIPFLDLFDINTGKKMERIWESDKEKYYETVVALMSDQEEGDLYLDKLKILTSKESKTENTQYYFVSWPDKNIVQVTNFPHPYPQLASLQKEMIRYERKDGVQLTATLYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAILSGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVIQRGVADPKKIAVGGHSYGAFMTANLLAHAPHLFCCGIARSGAYNRTLTPFGFQNEDRTLWEATNTYVEMSPFMSANKIKKPILLIHGEEDNNPGTLTMQSDRFFNALKGHGALCRLVILPHESHGYTAKESIMHVLWETDRWLHKYCVSNSSEAGEDHATDTVKEHVSKGTTNAESKVVAPSGGGSREVSDLEYEEFHSLPRSSL*

>Glyma.03g219500.2.p sequence-type=predicted peptide transcript=Glyma.03g219500.2 locus=Glyma.03g219500 ID=Glyma.03g219500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MMRLHKLYHRFTLVPLSLPSNPSLLPLAPPLRLTLRHRTSVNFASMASSRLRNLAPLAAAPTEDAAAASISSSPNAAASVDYDDESTVGVRYRVPPSVISDIVDAPPVPALSFSPLRDRIIFLKRRALPPLAEIARPEEKLAGIRIDGKCNTRSRMSFYTGIGIHQILPDGTLGSETEVSGFPVGAKINFVSWSPDGCHLSFSIRVNEEDNDSSKLTVWIADVKTGIARKLFQSPNVHLNAVFDNYVWVNNSSLLVCTIPSSRGAPPKKPLVPSCPKIQSNEERSIIQVRTFQDLLKDEYDEDLFDYYATSQLVLASLDGTTKEIGPPAVYTSMDPSPDHKYILINSLHRPYSFIVPCGRFPKKVELWSADGKLIRELCDLPLAEDIPIAFNSVRKGMRSINWRADKPSTLYWVETQDGGDAKVEISPRDIIYTQPAEPLEGEHPTILHKLDFRYGGVSWCDDSLALVYESWYKTRKIRTWVVSPGSEDVAPRILFDRSSEDVYSDPGSPMMRRTQAGTYIIARIKKESDEGRYIILNGNGATPEGNIPFLDLFDINTGKKMERIWESDKEKYYETVVALMSDQEEGDLYLDKLKILTSKESKTENTQYYFVSWPDKNIVQVTNFPHPYPQLASLQKEMIRYERKDGVQLTATLYLPPGYNPSTDGPLPCLVWSYPGEFKSKDAAGQVRGSPNEFAGIGSTSALLWLARRFAILSGPTIPIIGEGDEEANDRYVEQLVASAEAAVEEVIQRGVSFIFTVWRI*






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