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Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
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A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT2G47430.1 | AT | Signal transduction histidine kinase | JGI | N/A | IEA |
| GO:0000160 | GO-bp | phosphorelay signal transduction system | EnsemblGenomes | N/A | IEA |
| GO:0000160 | GO-bp | phosphorelay signal transduction system | JGI | N/A | IEA |
| GO:0006355 | GO-bp | regulation of transcription, DNA-templated | JGI | N/A | IEA |
| GO:0007165 | GO-bp | signal transduction | EnsemblGenomes | N/A | IEA |
| GO:0009553 | GO-bp | embryo sac development | EnsemblGenomes | N/A | IEA |
| GO:0010087 | GO-bp | phloem or xylem histogenesis | EnsemblGenomes | N/A | IEA |
| GO:0016310 | GO-bp | phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0018106 | GO-bp | peptidyl-histidine phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0023014 | GO-bp | signal transduction by protein phosphorylation | EnsemblGenomes | N/A | IEA |
| GO:0080117 | GO-bp | secondary growth | EnsemblGenomes | N/A | IEA |
| GO:0005622 | GO-cc | intracellular | EnsemblGenomes | N/A | IEA |
| GO:0005886 | GO-cc | plasma membrane | EnsemblGenomes | N/A | IEA |
| GO:0009506 | GO-cc | plasmodesma | EnsemblGenomes | N/A | IEA |
| GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
| GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
| GO:0000155 | GO-mf | phosphorelay sensor kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0000156 | GO-mf | phosphorelay response regulator activity | JGI | N/A | IEA |
| GO:0004673 | GO-mf | protein histidine kinase activity | EnsemblGenomes | N/A | IEA |
| GO:0005524 | GO-mf | ATP binding | JGI | N/A | IEA |
| GO:0016772 | GO-mf | transferase activity, transferring phosphorus-containing groups | EnsemblGenomes | N/A | IEA |
| GO:0042803 | GO-mf | protein homodimerization activity | EnsemblGenomes | N/A | IEA |
| KOG0519 | KOG | Sensory transduction histidine kinase | JGI | N/A | IEA |
| PTHR24423 | Panther | TWO-COMPONENT SENSOR HISTIDINE KINASE | JGI | N/A | IEA |
| PTHR24423:SF44 | Panther | JGI | N/A | IEA | |
| PF00072 | PFAM | Response regulator receiver domain | JGI | N/A | IEA |
| PF02518 | PFAM | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | JGI | N/A | IEA |
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Glyma.03g219100 not represented in the dataset |
Glyma.03g219100 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma03g37760 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.03g219100.1 sequence-type=CDS polypeptide=Glyma.03g219100.1.p locus=Glyma.03g219100 ID=Glyma.03g219100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGTGATGCACATAGAGCACCACGTGATTTTGAATTCAGAATATGTTCTCTCTCAATTCCAATCCGAAATTGAGCATTCGGCCGGACTGATACACCCTATAAATTCGTCCTCAACCAATTTTGCAAAACTTTTGAGTTCAACTCTCCAAGATACTAACCTTTCATTCTCTGATATCAAGACCAAGGTGGCTCCGTTATTATTTAAAGCATTTGAGACGGTTCCTAACTTAGCCCAAATTTCATACATAGAAAAGAAAGGTTTATTTTTCTCATACTACACTGATTATGGTCAAGTTTTGGCAATGTACTCAAACTCATCATCACTTTCCACTTCTTTTGGGGGTGCCTCAAATTTAAGCATATATTATATCCAGCCCGTAAATCGTGACACTGGAGAGTTATATGGGAAAGCCATAATATCTGAAGTACCATCTAATATTATCAATACAAGTTGGTTTGTGAAAGCAGTTAATAGTTCACTTAGTTATGCCTCATTGGGAACCAAGTGGAACAATGATCATGATCTTCTATTCGTTAGTTCATCTAGAATAAAGGGGACACAAGTGATCTCTCTAGGCATTCCAGTAACAACTATCACTGATTTCTTCACTCCGGTTGGGGCGAATTTGTCTTTGGTTACCAAAGATGGAAAAATGCTTGTAGAAGGGATTCAAAATACTCGTTTGGGCTTCTCTAATGACATGGTTTATTTCCAATCAGTGAATGCAAATGGTGATCAAACAAGTTATGACGGCGTTGTTTCATGCAAAGATGGAGATGCAGAAGCTGCCTCTATTTTGAATATTCAGGGTGTTGAGTATTTAATTCGCTGCTCCACCATTGATATAATGGAAATAAAATCGGTGTATGTTTTGGCTGTCCCACGAAAAGGATTGGACCACTTTGTTCTGGACATTAAGAAAAAAGGATTGGCACTATTGACAACAATGATTGTCATGATACTCATTGCCATGGTCAGTTTTCTATACATAAATGTTAGATCATTAAGGCGAGAAATGCATTTGTGTTGGTCACTCATCAAACAAAATGAAGCCACACAACAAGCTGAGCGAAAATGTATGAACAAGAGCCTTGCTTTTGCTAGTGCCAGCCATGATGTTCGCGCTTCGCTGGCGGGCCTTACTGGTTTGATAGAAATGTCCTTTCATGAAGTTTCTCCTGATTCTGAATTAGGAACCAACTTAAGACAAATGGATTCTTGTACCAAAGATTTACTAGGACTATTGAATTCTATACTTGATGCAAGTAAAGTTGAAGCTGGCAAAATGCTGCTTGAGGAAGAGGAATTTGATGTATTTCAACTCCTTGAAGATGTGGTTGATTTATACCATTCTGTGGCTATGAAGAAAGGAGTAGATATTGTGTTGGACCCTTGCAATGGTTCTGTACTCAGATATTCGCGCACGAAAGGCGACAGAGGAAAACTCAAACAAGTTTTGTGCAATTTACTGAGCAATGCTGTTAAATTTACCGAGGAGGGGCACATAGCTGTTCGAGCATGGGCTCAGAAGCCAAGCTTGCAGAGCTCAATGATTGCTACTCACCAATACGGGTCCAGTAGACTTTTGTCGCGCTTGTGTTGCCGCCAAAATGAAGCACGTGATGACGTGGAAGACTTGAACATCCAACAAGATCCAAATTGTATGGATTTTACTATTGAAGTGGATGACACTGGCAAAGGAATTCCTAAAGAGAAGCACAAGTCTGTTTTTGAAAATTATGTCCAAGTCAAAGAAACTACTCTTGGCCAAGAAGGAACTGGCTTGGGACTTGGTATTGTTCAGTCACTGGTACGTTTGATGCATGGAGATATTGAAATCATGGACAAGGATATTGGTGAAAAGGGAACCTGCTTTAGGTTCAATGTTCTCCTCACTGCCCATGAGACACAGATGAATGATGACACAAGAGATGACCAAGCTGGATCAGGTAACAAAAATCAATCTCATGGACTAACCATGAGTCCCAAGTTATCTATTTGGACCCGTAGTCCTAGATCCGAGGCTTCTCGAGTTGTTTTATTGATTCAAAATGAGGAGCGTCGAGGGACTACGCAGAGGTTCATGGAGAGGTTAGGGATCAAAGTTAAGGTTGTGAAGGAGTGGAGACAACTTCATTACACTCTGAAGAAGATCATCAAACAAAAGGGTCTCCATCCAAATAGCTCAAGCTCGCCAGAGTCTTCAGATTCTCCCTCTGCATCAAGCTGCACAAACGGAGTCCCTTTGAGTGCACAAGATGGAACTAATTACATAAGTTCAATCTTCAAGAGAACAGATATTGAAGCTTCCTCGGGTTTTGTCCTGATTGTGATTGATGCTAATGCAGGACCTTTTTCAGAGCTTTGCAAAGTGGTAGCTGAGTTCAAAAGAGGCCTTTGTTATCCTTGTAGGGTGGTTTGGTTGGAGAATCCACTTATACCTTCTGTGGACAACAAAATCCTTAACAAGGATGTTTCTAATTCTAATGACATTGTCTTGTCTAAGCCACTTCATGGTCATCGTTTATTCCAAGTCATAAGGATTCTCCCCGAGTATGGAGGTGTTTGGCCATGCAGTTCTAGTGAAACAAAGAAAGAAAAGGGTCAAGTTTCCTTAACTGATGAAGGTGCAATTCGACGTGTTGAACTACAAGAGTGTGGCAGCTCAAGCGTTACACAGCAATCTTATGATAGATCTAGAGCAAGAAAATCTCATATCCACCAAGGAGAAATACAAGAATGTGAAGAGTTAAGCAATGAAAAACCCTTGTGGGGTATGAAATGTTTGGTTGTTGAGGACGTTGTTTTGTTACGTAGGATAACTAAGTCTACTCTTGATCGGCTTGGTGCTTCTGTCATGGAATGTGAGAATGGTGAACAAGCTGTTCAGACAGTTGAAGAGGGTCTAACTAGGAATTCTTCCAATCGTCCATGTGATTTCATCTTAATGGACTGCCAGATGCCGGTAATGGATGGATATGAGGCAACGAGACGGATAAGGGAGATTGAGAAGTCTCATGGTGTTCACATTCCTATCTTTGCATTAACAGCTAATACAGGGAAAGAGGCAATATTGTCCATTGAAGCTGGAATGGACGATCACTTAATCAAACCCATCAACAAAGAGGCTTTACTTAAAGCCATCAAAAGAATATATACTAAAGAGTGA
>Glyma.03g219100.1.p sequence-type=predicted peptide transcript=Glyma.03g219100.1 locus=Glyma.03g219100 ID=Glyma.03g219100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MVMHIEHHVILNSEYVLSQFQSEIEHSAGLIHPINSSSTNFAKLLSSTLQDTNLSFSDIKTKVAPLLFKAFETVPNLAQISYIEKKGLFFSYYTDYGQVLAMYSNSSSLSTSFGGASNLSIYYIQPVNRDTGELYGKAIISEVPSNIINTSWFVKAVNSSLSYASLGTKWNNDHDLLFVSSSRIKGTQVISLGIPVTTITDFFTPVGANLSLVTKDGKMLVEGIQNTRLGFSNDMVYFQSVNANGDQTSYDGVVSCKDGDAEAASILNIQGVEYLIRCSTIDIMEIKSVYVLAVPRKGLDHFVLDIKKKGLALLTTMIVMILIAMVSFLYINVRSLRREMHLCWSLIKQNEATQQAERKCMNKSLAFASASHDVRASLAGLTGLIEMSFHEVSPDSELGTNLRQMDSCTKDLLGLLNSILDASKVEAGKMLLEEEEFDVFQLLEDVVDLYHSVAMKKGVDIVLDPCNGSVLRYSRTKGDRGKLKQVLCNLLSNAVKFTEEGHIAVRAWAQKPSLQSSMIATHQYGSSRLLSRLCCRQNEARDDVEDLNIQQDPNCMDFTIEVDDTGKGIPKEKHKSVFENYVQVKETTLGQEGTGLGLGIVQSLVRLMHGDIEIMDKDIGEKGTCFRFNVLLTAHETQMNDDTRDDQAGSGNKNQSHGLTMSPKLSIWTRSPRSEASRVVLLIQNEERRGTTQRFMERLGIKVKVVKEWRQLHYTLKKIIKQKGLHPNSSSSPESSDSPSASSCTNGVPLSAQDGTNYISSIFKRTDIEASSGFVLIVIDANAGPFSELCKVVAEFKRGLCYPCRVVWLENPLIPSVDNKILNKDVSNSNDIVLSKPLHGHRLFQVIRILPEYGGVWPCSSSETKKEKGQVSLTDEGAIRRVELQECGSSSVTQQSYDRSRARKSHIHQGEIQECEELSNEKPLWGMKCLVVEDVVLLRRITKSTLDRLGASVMECENGEQAVQTVEEGLTRNSSNRPCDFILMDCQMPVMDGYEATRRIREIEKSHGVHIPIFALTANTGKEAILSIEAGMDDHLIKPINKEALLKAIKRIYTKE*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
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